Trha008523.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- trapcc10-1
- Assembly
- GCA_018246435.1
- Location
- DWLU01001491.1:67-7837[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 8.2e+04 -12.9 15.3 422 562 77 217 61 244 0.64 2 2 7.8e-09 9.2e-05 23.1 0.1 253 326 308 382 297 390 0.85
Sequence Information
- Coding Sequence
- ATGAAAAGCTTGGATTTCAGTTCGTGCCCCCTCCTCCTTTGCCTAAATAACTTGAAGTTACAGCTGGCTAACCACGCTCTTAGGGTTATATTCACGGTCAAGGATTGGGTCGGCAATGTGACGGCGCAAGCGATAACAAATTCAATCATGATTACAGATGACCATAAAACACATGCGCCTCCAGCGCCTCCAGCGCCTGGCCCTTCCCCTGCATTGCCTGACGGGACACAATTACCTGGAGTTGGTGTGTTCCACTCAGGGACCAACGTTGATGCCACCAAAACTACTGCAGCAACACAGTCTCCGTTCCAAGCTTCCTCGACGACAGATTTGcaaggtctccagcaacggctGAATTCACCCTATCAGCCTGGTTCGTTCAGCGTCTCCCAAAACTCGACGGCAAATGGCTCATCGACGCCGCGAAGTCTTTCGCGGCAGACGTCTCCCAACGACTTTCAGGGACCAACGAGCAAGCGACGCAAACATAGCAGTTCAGCAAGACTTCCATCAGAATTGACCATGACTAAACTAGAAAATTCTCAGGCTTCTGGAGCAGCCAATTCGCAATCCGTGAACAATGGGCCACAATTCCCAACAGCACGTGCATTTACCTCACCTGCTGAGAGACCTTTTGTGTCACCGTCCGCTATGCCTAATCAGTTTGCAAATGGTCCACCGACTCCAAACAGCAATGATAACAACCCATTCTTCAGCTCTAATTCCCAGCAGCCAAACTTGGATGCTTTGGTACAGCAACGATTGATATCGGCTCCAAATTCGTCCCAACCCAGTCGCCCTGGATCCCCTGGGCCTTCAACTCGCAACAGTTTCCAGGAACAGAGTCTAAACCTCCTCGGGCCTAGTCCGTCAACTCCATTGTGGCCTCCTTTGACCAATGCTGGAAACCGGTTACCATCTGTCATACACAAGCTGGTACCTGCAGAGGGCTCCATTACTGGAGGAACAGAAGTCACACTGTTAGGTAGCGGCTTCTACCCTGGCATGGAGGTTGTCTTTGGCGATACTCTTGCTACAACCACCACCTTCTGGGGTGACAAATGTCTCAATTGTCTGACTCCACCCGCCCTGCAACCTGGTCTTGTAGCGGTACTCTTCAAGCATGAGCATCCGACATTCGGTCAAATGCAACCAACCCAGGCTTTGATGCCGAAGCAGCAGCAATTCTTCCGCTACGTGGATGATCGAGAACTTCAAATGTACCGGTTGGCTCTTGGTATTCTTGGACAAAAGCTAGGAAGCCAAGCGGATGCATTCCAGACTGCTCAACAAATTATGGGAAGTGACCCTAAAGCGGTTTTCAACCTTCAAAAAGATTCTTATAACGGCTCTGGCGGGGGCAATCAGCGTCAGGTCCCCGGACTGGAATCACAGGGTCAATTGACCGACCTGGACTCCAAGATGCTTACATACCTTGAGTTTATCGATCTTGATGATAGCCCGCGTCCACCTAAGTATAACACACGTTGCGGAACAGGGCAGACCATTCTTCATCTGGCTTCTTCCTTGGGCTTGACTCGATTCGTTGCTGGATTGCTTGCTCGAGGTGCCAATCCAGATGTGCAGGACCACACTGGGAACAGTCCAATGCACCTGGCAGCCCTGAATGGCCATGCACACATTGTCCACCGGCTTCGCCTAGCTGGTGCAAGCCCCAGTGCCCGCAGCATTAGGGGCTTTACACCGGCTGATCTCGCCTCAACACTACCCGCCCATCAAGCAGCGTTATTACCGTCACGCCACTACCGCTCACGCAGCGTTGGATCGTTGACCTCATCACGACTCCGGCGAAGCAGCTCGGCATCGGTTCACTCCCTCTGGGAAGGTTCTTCTGGTTCCAGCTCGCTTGATAATGCTATTGAAGACTcgtcggaagaggaagacgttTCTGACTCGGAAGGTGAACACGAAATCCAGGAATCTAGGCGGTCGAGCGTCCACCAGGATGCCCAGGCGGCACTTACGCCTGAAGACACAGCATCGCCAGAAGATGCCCGACCATTCTCACCCCCCGCGGCCCTCGTCGCTTGGCGGAACCAGCTCCAGGCTCAAATCAATCAATTCCAGCAGAGCGTTTCCAATGCATTCCCTAACTTACCTGCTCTCCCGCCTATGCCCACTCTTCCCGACTACCAAGCACACCCGATGATGCGTCGTATTACCAACCTTGTGCCGAATCGGCCAACCGCTCCCTGGACCGCGAAGGACGGCTGGTGGGATCTGCTTAAGGGCAACAGTTCTGCTCCTGATACGCCCGAGCTGCCCTCGTATGAAGAGTTATATCCCCATAAAGAAGAGCAGGAAGAAGAAGCATCAGAAGTTAAAAAGACGGCCATGTTGCGGGCAGCCACCGAAGCAGTGGTGGACCAGCACTTTGAAGCGCAGTCAAGTCGGTCCCAGACCGCACCTATCAAGGATGAAAAAGAGGACAAAGAAGACCTCAAAGACATCCGAATTGGCCGGAAAGTGATTTCTCGCGAACAACAAAAGCATCTCAGAGCCCAGCAAGCGCAGAGAATGAAGGGCCTGGGTAGTGATCGGAACCTTTACTTCATTTGGattCCGCTTTTGCTTTTGGTTGTTTGCGCATGGGCTCGAAACTATGCCCCGGGTATCTGGCATGGAATTTCCAGCGGATATGAGTTTGTCAAAACCCGCTATACACAAGGCGCTATTGAAGCCGTCGAGTACACTGATCCGTCCGGTCTATTTCCTCTTGTCCAGCCTATCTTCGAGGACAAACTCCCTCTGAAGAACCTCCACTGGAAGTCCCCTAGCCGTCCCGTTCGTTCGATCGAGTCCCTCCGCATCGGCTTTACCCAACAGGAGGCCGTCGAACGCAAGTCCTCTAGCGACACAGCCTCCGGTGCTGTTCCACACAGACGACATCAAATCCCGGGTCTACGACAGACGCCCTACTTGAAGATCTACCTGCTACGATGCGATGATAACGACACCTACAAGACCACTGCCCGGAAAGCAGTGCGCGAATGGATCAAAGCCCACGCCTCCACACCGCAAGCCAGCGCGTCGACTACTAGCAGCAACCAGGAAAAACACGATGCTTTCGAATGGCTTATATTGCATGTGGTTCAGGACGGGGATGGCGCCGACAAAGCATCTACCTCGAAATGGGGCCAGAGGAGCACAACGGTGCTAGAGAAGGTCAAGGCCGACTTCAATGGGTCTTCTAAGTCGGCAGTGGACCGGGTGGCTCAGCTGCGGCTTCCCAAGCCTGGGACGTCGCAGAAGCCGGCTGAGTTGCCGGATCAGATCGAGGATCTAGtggagaagatgaagaatgCGATTCTGGCGTCGTTTGATCTCCGGGTGGCGCAGTATGAGGATGATATCAAGGAGAAGGATTCGCAGCGGAGTCTTCCAGGTTGGAATTTCTGCACGTTCTTTATCTTGAAGGAAGGTCTTGCCAGGGGGTTTGAGAATGTGGGCTTGTTCGAGGATGCGTTAGTTGGGTACGACGAGCTTTCTGTTGGTTTGGATATCGCGATCCACGAACAGCTTCAGGGGAGCGGTGATCAACATGGCAGCGCTTTGTTGACATTCAGTAAAGACTGGCATGAAAAGGCCAAGAAGGCCCTGGAGTCGCGAGGTAAAGGCGATGATTCTCCCAAGGATGAAGGCGAAGGAGACATTGCCCCAATCCCAGTAATTGATCCCGACGATTTTCCTTTCGATTCATCCAAGAAGCCCTATCGAGAAATGATCTTGGCCAGTGACATCTCTATCTTCGATTTCCGAAACTATGTTTTTTCCCGGCAACTGACCTTGCTTCTCAGGGCAGCGAGAGCTCCGTCATTGGCTAGCAAGGACTCACCCAAAAAGGGTAGGAAGCCAGAAGACCTCATGCTCCTTTCAGAAATATGCGAGCGGGCTACCGAATTTATTTCCCTTGCTGCACGAACGCTCCGGTGTGACCTGGAGCTTGGATTGGACGACATGGACAATGCTACCAAAACCGAGATCGCCAGCCACCTTGTGTCCTCCTGGACATATGCTGCTGCATCTCAAATCTTGTCTCAAACTTGGGCTCCAAACCTTACTCTTCCCGAGTCTATACGTGTGATCGAGAAGTCATTGGACACTTCTTCCCCCGCCGTTGCTGCTACTGCCGAGATCAGACCAGATGTTCCTAAACGGTCTAGTTCATTGGTCAATCCACCTGCTCCTCGTGCTCCTCGCCCAGTGAGCCAGGATATCTTTGACGTCCTCGCTCCTATCCACACGCGTGCTGGCTCAGAATCAAAACCCGCAGTCGCTTTGAACCCAAAGACCGGTTCTGAGCAACTGGCTTCTGGAAGGGGCGAGCTGTTTTTGCTGTCTCGCCGAGTTCTGGAAGAGATTGCTGGGCAAAGGGGCTGGAAGGAGAAGTGGAATGACCTTGGTCTTCTATTTGACAGCAAGAATGCCGGCGAGGGAGACATGACAGAGGTATCGTTAGATGATGCGCAACCGGGCGGGACCCCTGAGCCTAAGACggcctcttcttctttttctctttgtgGAATTGACCTAGCTGGACTGAGGGCTGCTTTAACTTCGAGGCGCGCCTTCCGTGCTCAATACGAGGAGCTTACAGATCAGATGTTCCGTCATCACATCGCGGCGAATCGTCCCTATTCCGCTGAAATGGCGATTGCGGACATTGCTTTGCTGCGATATCGCCAAGCCGACTACGGTGCAGCAGTCTCCCACTTTCACCAGATTGCACCTTTTTACGGGAACAAGCATTGGATTATTCTGGAAGGAGCTATCCTGGAGATGTACGCACGGTGTCTGAAGCAATTGAAACGAAGCGAGGAATATGCCCGTCTGCTACTCCGCCTCCTGGCCAAGTTTGCTGCCCATACACAGGCCAACCTAACCGGCCATGAGCAAAAGATACATGGCACCTCATCTCTGTTATCGCTGATATCTCCGTACGTTGATGAACTATTCGAAACGTCGAGTACACTACAGAAAGAAGTCCACGCCTCCCTGACGGACTTTTTTGCCGATTTACGAGTTGACCCTGCCGTTCTTCATTACGAGGATAAGGATGGGTTTCAGGTTCAGCTCTACTTGCGATTTTTGTTAGGGAAGCAGATCAATGTTGATACTGTCAAGATTCGACTTGTCAGTGCTAGCGGCTCTCAGAGTAGTGAGCATTGGATTGAGACTTCAGCCAAGGCTGTTGTCAAGTCGTCGTCGACGAGGTTGCTCGTTGATTCTTCGACAACCTTGCAAGGAAAATACTTTGTGGACCGCGTTGAGATGCGGGCAGGCAACATTGTGTTTACGCTCGGAGGTGGAAAGCACCCTGCGCTGCCCTTGGGCTTCCGGGAAGCCCTGGACGCTGAAGAACAAGACAATCGGCCTCCTGTCTACTGCTACCCACCGGCAGACGGACTCCACGCCAAGATTGTAACCACCCACCTCATCAACCTGGAAGAAATGCGCACGCTGGAGCTGGAGCTCAACAGCGGACGAAACGATATTAAGACGGGGACGATTCGGGTGCGGCCCGCGACAGCAGGGCTTCGGCTCCGGATCGCGGAGGCTGAATTGGTAGAAGGGAATATGAACATCACAGCCAGCAATGAATCGGGGAATATTGAATTTACGCAGTTCGGATCGAAGTCGTTCGTTCGGTTCCGGATCCCCTATACTGTTGACGAGAACCATGCGACGCTTTCTGCGCGGGCGGAGGTTAGTTATGAAACAGAACAGGGACGGTTCTCATATTCGTCGGTGCATAGCATTGTTTCCTCCCTCCCGATCAGTGTCAATGTGCAGGATGTCTTCAAGGATGAAGTGCTCTTCTCACGATTCACCATCAGCCCAGCCATGCTGGACCCCCTTCGCATACTCAGCTGCAGCATTCCCAGCTCCGACACGTACCAAGCTGAATCCAATGTCCGGGAGAACGTGACATGGGATGTATTTCCCAAGCAGCCGGCGTCGCTACTATACAAAATCCAGCCGCGTAAGGATCGCGTCGCTTCCCCAGGAGCCAAGGGTTCTTTGCGTCTCACTGTGGAATTCACCTGCGTGGACGATGAGTGTCTGGATGCTGTTGAGAAAGAATTCAGAACCGCCATTGAAGCGAGTGAATTCCGAGGTCATACGTCTCTGCTCACCACCCACATTGTGGAGACATTCCGGACCCAGCTATCGACATCTGATATGGAAGTTATCGGCCTGACACGGGAGATTGAAACCCTACCATACCAGAACATCCGTTGGGAAAACCTGCTTGGTGCAATGAAGACTCCAGTAGACGACAAGTTGAAATCATGGCTCAGGGAGTGGCACCAGAACCACCCAGTCATCAGCCTCCCCCAACAACCCTCCATCCCCAGTCGCCGCATCGTAATCCCCGTGGATATTCCAGAGATCCAAGTAGTGCACACAGCTGAGCTGCGACTGGGGAACCTGGCCACACAACCCACGCACGCAGCGGTTGGGCAGATGATTGCAGCCGAGCTGCGGCTACGTCACACACGCCGATGGTGTACACCGGAACACCAAGAGCACAGGGACGGTGCGCTCGAATTCTCATACGACCTGCATGCCAACCCGGATCTGTGGCTGGTGGGAGGTCGTCGACGAGGGAATTTCCTCGCACATGAAGGAGACACAACCACGTTTACCGTGATGCTCCTACCCCAGAAAGCGGGCCATCTGCTTCTCCCCGGGCTGGACATTAAGGCGTTTGTGCCTGCTTCAACCTCGGCCCCAGCCGTAGCGACGACATCTCCACCACCGTCCACTGCTACTACGACTACACCGGGGATGGCTGCTACGTCGGGGAACATCGGGGCGGGGACACCCTTGCAGCGGAGGCAGATCGCTTGCGAAGTCGATTATCGCAACCATGCAGAGACAGTGCTGGTGCTGCCGGACCTTCGCAAGACGACGGTGAATCTGAGTACGTCGGGAGGGAATCATGGAGGGGGGTCATGGTTGGTTGATTCAGAGCGACGAGGGTAA
- Protein Sequence
- MKSLDFSSCPLLLCLNNLKLQLANHALRVIFTVKDWVGNVTAQAITNSIMITDDHKTHAPPAPPAPGPSPALPDGTQLPGVGVFHSGTNVDATKTTAATQSPFQASSTTDLQGLQQRLNSPYQPGSFSVSQNSTANGSSTPRSLSRQTSPNDFQGPTSKRRKHSSSARLPSELTMTKLENSQASGAANSQSVNNGPQFPTARAFTSPAERPFVSPSAMPNQFANGPPTPNSNDNNPFFSSNSQQPNLDALVQQRLISAPNSSQPSRPGSPGPSTRNSFQEQSLNLLGPSPSTPLWPPLTNAGNRLPSVIHKLVPAEGSITGGTEVTLLGSGFYPGMEVVFGDTLATTTTFWGDKCLNCLTPPALQPGLVAVLFKHEHPTFGQMQPTQALMPKQQQFFRYVDDRELQMYRLALGILGQKLGSQADAFQTAQQIMGSDPKAVFNLQKDSYNGSGGGNQRQVPGLESQGQLTDLDSKMLTYLEFIDLDDSPRPPKYNTRCGTGQTILHLASSLGLTRFVAGLLARGANPDVQDHTGNSPMHLAALNGHAHIVHRLRLAGASPSARSIRGFTPADLASTLPAHQAALLPSRHYRSRSVGSLTSSRLRRSSSASVHSLWEGSSGSSSLDNAIEDSSEEEDVSDSEGEHEIQESRRSSVHQDAQAALTPEDTASPEDARPFSPPAALVAWRNQLQAQINQFQQSVSNAFPNLPALPPMPTLPDYQAHPMMRRITNLVPNRPTAPWTAKDGWWDLLKGNSSAPDTPELPSYEELYPHKEEQEEEASEVKKTAMLRAATEAVVDQHFEAQSSRSQTAPIKDEKEDKEDLKDIRIGRKVISREQQKHLRAQQAQRMKGLGSDRNLYFIWIPLLLLVVCAWARNYAPGIWHGISSGYEFVKTRYTQGAIEAVEYTDPSGLFPLVQPIFEDKLPLKNLHWKSPSRPVRSIESLRIGFTQQEAVERKSSSDTASGAVPHRRHQIPGLRQTPYLKIYLLRCDDNDTYKTTARKAVREWIKAHASTPQASASTTSSNQEKHDAFEWLILHVVQDGDGADKASTSKWGQRSTTVLEKVKADFNGSSKSAVDRVAQLRLPKPGTSQKPAELPDQIEDLVEKMKNAILASFDLRVAQYEDDIKEKDSQRSLPGWNFCTFFILKEGLARGFENVGLFEDALVGYDELSVGLDIAIHEQLQGSGDQHGSALLTFSKDWHEKAKKALESRGKGDDSPKDEGEGDIAPIPVIDPDDFPFDSSKKPYREMILASDISIFDFRNYVFSRQLTLLLRAARAPSLASKDSPKKGRKPEDLMLLSEICERATEFISLAARTLRCDLELGLDDMDNATKTEIASHLVSSWTYAAASQILSQTWAPNLTLPESIRVIEKSLDTSSPAVAATAEIRPDVPKRSSSLVNPPAPRAPRPVSQDIFDVLAPIHTRAGSESKPAVALNPKTGSEQLASGRGELFLLSRRVLEEIAGQRGWKEKWNDLGLLFDSKNAGEGDMTEVSLDDAQPGGTPEPKTASSSFSLCGIDLAGLRAALTSRRAFRAQYEELTDQMFRHHIAANRPYSAEMAIADIALLRYRQADYGAAVSHFHQIAPFYGNKHWIILEGAILEMYARCLKQLKRSEEYARLLLRLLAKFAAHTQANLTGHEQKIHGTSSLLSLISPYVDELFETSSTLQKEVHASLTDFFADLRVDPAVLHYEDKDGFQVQLYLRFLLGKQINVDTVKIRLVSASGSQSSEHWIETSAKAVVKSSSTRLLVDSSTTLQGKYFVDRVEMRAGNIVFTLGGGKHPALPLGFREALDAEEQDNRPPVYCYPPADGLHAKIVTTHLINLEEMRTLELELNSGRNDIKTGTIRVRPATAGLRLRIAEAELVEGNMNITASNESGNIEFTQFGSKSFVRFRIPYTVDENHATLSARAEVSYETEQGRFSYSSVHSIVSSLPISVNVQDVFKDEVLFSRFTISPAMLDPLRILSCSIPSSDTYQAESNVRENVTWDVFPKQPASLLYKIQPRKDRVASPGAKGSLRLTVEFTCVDDECLDAVEKEFRTAIEASEFRGHTSLLTTHIVETFRTQLSTSDMEVIGLTREIETLPYQNIRWENLLGAMKTPVDDKLKSWLREWHQNHPVISLPQQPSIPSRRIVIPVDIPEIQVVHTAELRLGNLATQPTHAAVGQMIAAELRLRHTRRWCTPEHQEHRDGALEFSYDLHANPDLWLVGGRRRGNFLAHEGDTTTFTVMLLPQKAGHLLLPGLDIKAFVPASTSAPAVATTSPPPSTATTTTPGMAATSGNIGAGTPLQRRQIACEVDYRNHAETVLVLPDLRKTTVNLSTSGGNHGGGSWLVDSERRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -