Trha031600.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- Kdm5
- Assembly
- GCA_018246435.1
- Location
- DWLU01035993.1:2-2771[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-17 2.2e-13 52.5 0.0 26 87 1 61 1 63 0.92 2 3 0.72 5.4e+03 -0.0 0.0 37 52 155 170 155 188 0.82 3 3 4.4 3.3e+04 -2.5 0.0 21 35 408 422 388 423 0.81
Sequence Information
- Coding Sequence
- GTCGACAAGCGTCCCTTGGATTTGTTCAAATTGAAAAAAGCAGTGGAGGCGCGCGGTGGCTTCGATGCGGTTTGCAAGACGAAAAAATGGGCGGAAATCGGTCGCGACCTGGGTTACAGTGGCAAGATCATGTCTTCTCTGTCTACCTCGCTCAAGAATTCCTACCAGCGAGGGCTCCAGCCCTGTGAAGAGGATCTTCGTCTCGCTGAGCCGGGTGTGCAGCAACAGTTGGAGATTGAAAACGGTGGCCCTCTGACCCCGTCGCCCCATCAATCGCCATTGCACCAAAAATCGTTGCCAGTTGATGCCTACCCTCCACTGAACACACATCCCGGGACACCCGTCGCCCTGCCGTCCCTGTCGGCTCGGAACACCCCCAAGGGAGCCGAGCCATCCCCGGAAAAGTCAGCTGCGCCGCCCACGCCAGCGGAGTCTGCACCTTCTCGTCCCCCACCCTCTGGCTTTACGGCGGTGAATGCGTCGGGTGGCTTTACCGCTGTCAATCAGTCGCCGTCCTTTGCTGCGGTAAACAACAACGGTCCGTCCGTCAAACGGGAGCCCGAGAATGGATCTACGGTCATCTCCCAAGGTGTTACAGATCATTCGCAAAGCGCCACTCCTGTCCCCAATGGCCAGGGGGACAATGGGGTGAAGCGTGGAGTGAGTCTGGACAGCAGTTCACAGGCGGATAGTGGGGATGCAGATGGTGGAAGCGGCCGTCGAAGCAAGCGTCTCAAGAAGGATTCTTTTCCCACAGTTGTCGGTTCTCACATGAGTTTTCGTCCCACTCCACCCCGGCCACGTAAAAGTGGAAGCGGTGGCGAGAAAACTGGAGagaaatgtgAAGCGTGTGGTAAATCAGAAGACGCCTCTTCCATTTTGGTATGCGACAGTTGCGACCTTGGGTACCACGGCTCCTGTCTCGATCCGCCGGTGTCCGCTGCCCCAGAGTATGACTGGCATTGCCCCAAGTGTTTAGTTGGCACGGGAGAGTTTGGTTTCGAAGATGGGGGAGTCTACTCGTTGAAGCAGTTCCAGGAGAGGGCAAATGAGTTTAAAAAGAACTATTTCGCCTCCAAGATGCCATTTGACCCCGTTCTCAACACGCATCGACGAGAAACCGAAGACGATGTCGAGCGCGAGTTCTGGAGGTTAGTGGAAAGCCTGACAGAGACCGTCGAGGTCGAGTATGGTGCCGATATCCACTCCACTACCCATGGCAGTGGATTCCCGACCATCGAACGGAACCCTCTCGAGCTCTACTCTGTGGATCCGTGGAATTTGAACGTACTACCCTTCCACGCGGACTCGCTTTTCCGTCATATCAAGACTGATATCTCCGGTATGACCGTCCCGTGGGTCTATGTTGGCATGTGTTTCTCGACCTTTTGCTGGCATAACGAAGACCACTACGCGTATTCGGCCAACTATCAACACTTCGGCGCCACGAAGACATGGTATGGGATTCCGGGCGATGAGGCGATGGCCTTTGAGGATGCTATGCGCAGAGCAGTCCCGGAGCTGTTTGAAGGTCAACCGGATCTCCTCTTCCAGCTCGTCACGCTCATGCCACCCGATCAGCTCCGAAAAGCAGGCGTCAATGTTTATGCAGTTGACCAGCGGGCCGGACAATTCGTGCTCACCTTCCCGCAAGCATACCATGCTGGATTCAACCACGGATTCAATTTCAACGAAGCCGTCAACTTTGCGCCTGTGGACTGGGAGCCGTGGGGGGCCATGGGCGTGGAGCGTCTCCAGGCATTCCGGAGACACCCTTGCTTTTCGCACGACGAACTGTTGATGACAGCCGCCGATCGAGATCCATCTATTGCCACAGCCAAATGGCTAGCGCCGGCTCTCGAGCGAACGGGTATCCGAGAACTCAGGGAGCGTGCTGCGTTCCTCAACTGGCATCGGCAGATCGCTCCGCACACGTGCACACTTGTAGAAGGCTCCTCTTCCTCTGGCGGCGAGTGCCAGCTCAAATTTATCACCGAGAAGAAAGATCTGCCTGAAGAGGAGTACCAGTGCGACTACTGCAAGACCCTGACGTATTTAACGCTATTCCGCTGCCATGCGACAGGGAAAACCGTCTGTTTACAGCACGTGGAAATTTTCGACTGTTGCGGGCAGCCTCTGCCGCAAAGATTACTGGGCCCGGATCACACCCTACGGTACCGGATAGGTGACGAAGAGTTGAAGACTCTGGTACAAAAGGTCGACGAGCGCGCAAGGATTCCGGAAGCCTGGGGCCAGAAGCTCGACAAGTACCTGGAGGACGAGCCCAAACCCCAACTGAAGGTCCTTCATAACCTCGTGAACGAAGGTGAGAAAATCCCATACCATTTGTCTGGTCTCCAAAATCTGGCGGCGTTCGTCCAGCGCTGCGATAAGTGGGTGGAAGAAGCGAACTATTATATCGCCCGGAAGCAGCAAAACCGGAGAAAGAACGAGAAGGCTTGGCGTAAGGGAACGTCGAAGGCCGCGCAGCTGGAAGAACGTGATCGCGAAGTTCGCAGAGTAGAATCCATCTACTCCCTTCTTGCAGAGGCTGATAAACTTTCCTTCGACTGTCCACAGATGGCGGCCCTGGAAGAGAAGACCCGCGAAATC
- Protein Sequence
- VDKRPLDLFKLKKAVEARGGFDAVCKTKKWAEIGRDLGYSGKIMSSLSTSLKNSYQRGLQPCEEDLRLAEPGVQQQLEIENGGPLTPSPHQSPLHQKSLPVDAYPPLNTHPGTPVALPSLSARNTPKGAEPSPEKSAAPPTPAESAPSRPPPSGFTAVNASGGFTAVNQSPSFAAVNNNGPSVKREPENGSTVISQGVTDHSQSATPVPNGQGDNGVKRGVSLDSSSQADSGDADGGSGRRSKRLKKDSFPTVVGSHMSFRPTPPRPRKSGSGGEKTGEKCEACGKSEDASSILVCDSCDLGYHGSCLDPPVSAAPEYDWHCPKCLVGTGEFGFEDGGVYSLKQFQERANEFKKNYFASKMPFDPVLNTHRRETEDDVEREFWRLVESLTETVEVEYGADIHSTTHGSGFPTIERNPLELYSVDPWNLNVLPFHADSLFRHIKTDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGDEAMAFEDAMRRAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYAVDQRAGQFVLTFPQAYHAGFNHGFNFNEAVNFAPVDWEPWGAMGVERLQAFRRHPCFSHDELLMTAADRDPSIATAKWLAPALERTGIRELRERAAFLNWHRQIAPHTCTLVEGSSSSGGECQLKFITEKKDLPEEEYQCDYCKTLTYLTLFRCHATGKTVCLQHVEIFDCCGQPLPQRLLGPDHTLRYRIGDEELKTLVQKVDERARIPEAWGQKLDKYLEDEPKPQLKVLHNLVNEGEKIPYHLSGLQNLAAFVQRCDKWVEEANYYIARKQQNRRKNEKAWRKGTSKAAQLEERDREVRRVESIYSLLAEADKLSFDCPQMAALEEKTREI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -