Trha044322.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- otaR1
- Assembly
- GCA_018246435.1
- Location
- DWLU01070688.1:528-1240[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 8.8e+03 -1.1 0.1 47 55 140 148 133 151 0.65 2 2 4e-09 8.2e-06 27.8 11.6 9 65 153 209 139 209 0.92
Sequence Information
- Coding Sequence
- ATGGATAACACCCCCATGTCTAATGATGCTCCTCGAGAGTGGACGGATATATTCTCTCAGTTGCATGAGAACGGAGCGGGCTCAACAACGCATTTCGACTCGACGTCTCCCAGAGAGGCCTTCTCATCTGATCTTTTTGTCACTTCGCCAGACCAACAGAACGACGACTTTTCTTATCCGCCTACAATGTCGCATTTCGAAGAGCTCAACCAGATTCTTGGGCTACAATCTATCGGCGCCAACAACATCACGCCAGATCCTTCTACGTTTTTGAGCGACCCTCGGGGATTCAAACTCCCCTCTGATACGACGTCTTCCTCAACATATCAAAATCAGTTTGACACTTCGGCGCAACCCAGTTCGACTGAGGCATGTTCTCCTTCCAGCGAGCCACAATCTGCATTGGAGAAAAGCGATGAGGTCAAACAGCTACGACGCAAGTATCACGAAAAGTACAAGGAGCGCAACCGCCTAGCCGCCAGCAAGTCGCGACAAAAACAGGTGGATTTAATTGCCCTACTGGAAGCCGAGAGAGGAGACGAAGAGCGACGAAGACGAGCCCTGGAGGACGAGATCCGGCAAATCCAAAGGGATCTTCATGCGATCAAACAAGAACTGCACAATCACATCCGCGTGTCGAATTGCATCAACATGATGTCGCAG
- Protein Sequence
- MDNTPMSNDAPREWTDIFSQLHENGAGSTTHFDSTSPREAFSSDLFVTSPDQQNDDFSYPPTMSHFEELNQILGLQSIGANNITPDPSTFLSDPRGFKLPSDTTSSSTYQNQFDTSAQPSSTEACSPSSEPQSALEKSDEVKQLRRKYHEKYKERNRLAASKSRQKQVDLIALLEAERGDEERRRRALEDEIRQIQRDLHAIKQELHNHIRVSNCINMMSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -