Basic Information

Insect: Troides oblongomaculatus
Gene Symbol: DUS4L
Assembly: GCA_029032895.1
Location: JARDWC010000315.1:1878831-1893191[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.5e-06 0.00031 21.5 1.3 2 23 404 425 403 425 0.97

2 8 9e-06 0.00079 20.3 2.6 1 23 431 453 431 453 0.98

3 8 1.8e-06 0.00016 22.4 0.3 2 23 462 483 461 483 0.97

4 8 1.8e-05 0.0016 19.3 0.3 1 23 489 511 489 511 0.99

5 8 7.9e-08 6.9e-06 26.7 1.8 1 23 517 539 517 539 0.98

6 8 2e-06 0.00018 22.3 1.4 1 23 545 567 545 567 0.97

7 8 5.2e-05 0.0045 17.9 7.3 1 23 573 595 573 595 0.97

8 8 9.7e-05 0.0085 17.0 1.3 1 21 601 621 601 622 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.5e-06	0.00031	21.5	1.3	2	23	404	425	403	425	0.97
2	8	9e-06	0.00079	20.3	2.6	1	23	431	453	431	453	0.98
3	8	1.8e-06	0.00016	22.4	0.3	2	23	462	483	461	483	0.97
4	8	1.8e-05	0.0016	19.3	0.3	1	23	489	511	489	511	0.99
5	8	7.9e-08	6.9e-06	26.7	1.8	1	23	517	539	517	539	0.98
6	8	2e-06	0.00018	22.3	1.4	1	23	545	567	545	567	0.97
7	8	5.2e-05	0.0045	17.9	7.3	1	23	573	595	573	595	0.97
8	8	9.7e-05	0.0085	17.0	1.3	1	21	601	621	601	622	0.95

Sequence Information

Coding Sequence: ATgaagtttaaaaacaatatttcagatttattttatcatgCTAAATCTAACGCAACGTATTTAAACGTTTGTGCCCCTATGGTTAGATACAGCAAAATACAATTTCGAACACTTGTGAAaaaCTATGATATTGATTTGGCGTTCACACCAATGATTTTAGCAGATTCATTCTGTCAAAATGCCAAGGCACGTTCAAATGAATTTGCAACAACTGATAATGACTCACCTCTGATTGTACAATTTGCTTCCAAAAGTATTGATGATTTTATAGATGCCTCAAAATTAGTATATCCATATGCAGATGGAGTAGATTTAAATTGTGGCTGTCCTCAGAGGTGGGCAATGAAGGATGGTTATGGTTGTACTTTACTATCAAAGCCAGAGGTGGTAAATGAATTAGTTAAGGGTGTTAAGAATAGCCTGCCAACAGATTTTAGCATATCTGTTAAGATAAGAATattgaatgatttaaaaaaaactatagcatTGTGCCAACAGCTGGAAAAGTGTGGCATTACATTTTTGTCAGTACATGGACGCACACCTGTACAGAAAAATGGAGAAGATATTGATGTTTATGCATTGAAAACTGTCTGTGACTCAGTAAATGTACCTGTTATTGCAAATGGTGGTATTAAAACTCTAGCTGATGCAGATAGGTTGTATAAATTTACAAACTGTAATGGAGTCATGGCAGCAAGTGGGATTTTGGCTAATCCTGCTTTGTTTACTGGAgccTCTTTAAAgattgataaaaattatttgtttcgaTTAGAATGTCCAATACAAGATTTAAGAATGTCATTACCAAAATGTGTTGATTCTGAACCCGATGAAGTCGAACAAGATTTTTTGATGAAGGATTTTGGAAATCAAAACAGAGAAGGTTATATAAATCCACGTGAAAACGAAGGTAATAATTTCAAAAGTACAGTAAGCAAAAATTTAATACTGAACGAAGTATTAAAAAGCCCTTGGTGTCCACGCTTATGTTATTACTATAAACCATTTCGTAAAAAGTGTAATGATCGGATGCAGACTGATTTTGTAAAGAGGCAGGTTTGTATTGATAACGAcaagaataataatatagatgatgaattatcatcagtaaatattattgaatcGTTGAGAAAGGATTCAAATATTGAAATCAGAGACGTGATAGTAACATCTCGTCCAATTTGTCAGAGCATTAGAAAGGAATTGAAATGCACAAGTTGCAGTCAGGCATTTACAAATAACGAGGCGCTTACAAAGCACATGCGACGGCATTCGTCTGCTACTCGTTACACATGCGGGGATTGTTACAAAACCTTTTCTCAGCTTCGTAACTTCAAGTATCACATGTCGGTGCATCGAGGCACTAAAGAATTCGCTACGACTTGCCCCGTTTGcggaaaatatttcaatgatagAGGATATTTAAGTAGTCATATGAAAATACACAGAAATAAAAAGGAGTACAAGTGTGCGTTGTGTCCAAAATCATTCAATCAGCGGGTGGCTTATAACATGCATGTGCGAATTCATACAGGTGTGAAACCTCATGTCTGCGAAGAATGCGGCAAAGCCTTCTCGCGGAAGATGCTTTTAAAGCAGCATCTACGAACGCACTCCGGGGAGAGACCGTATGCTTGCTCGCATTGTGACAAACGTTTCGCCGACCGGTCGAATATGATCCTACATTTAAGACTTCATACTGGTATAAAACCTTTCACGTGCTCGCTCTGCCCTAAATCTTTCACGAAAAAGCATCATTTGAAGTCACATTTGAATTTTCATACCGGCGCCAAACCATATTCGTGTCCTAGGTGTAAACTTGCGTTTACCCAATCGTCCAACATGAGAACCCATTACAAGAAATGTAAAACGCCTGAAGGTTTCTTATCTGCAGCTCAGCCTTAA
Protein Sequence: MKFKNNISDLFYHAKSNATYLNVCAPMVRYSKIQFRTLVKNYDIDLAFTPMILADSFCQNAKARSNEFATTDNDSPLIVQFASKSIDDFIDASKLVYPYADGVDLNCGCPQRWAMKDGYGCTLLSKPEVVNELVKGVKNSLPTDFSISVKIRILNDLKKTIALCQQLEKCGITFLSVHGRTPVQKNGEDIDVYALKTVCDSVNVPVIANGGIKTLADADRLYKFTNCNGVMAASGILANPALFTGASLKIDKNYLFRLECPIQDLRMSLPKCVDSEPDEVEQDFLMKDFGNQNREGYINPRENEGNNFKSTVSKNLILNEVLKSPWCPRLCYYYKPFRKKCNDRMQTDFVKRQVCIDNDKNNNIDDELSSVNIIESLRKDSNIEIRDVIVTSRPICQSIRKELKCTSCSQAFTNNEALTKHMRRHSSATRYTCGDCYKTFSQLRNFKYHMSVHRGTKEFATTCPVCGKYFNDRGYLSSHMKIHRNKKEYKCALCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHLRTHSGERPYACSHCDKRFADRSNMILHLRLHTGIKPFTCSLCPKSFTKKHHLKSHLNFHTGAKPYSCPRCKLAFTQSSNMRTHYKKCKTPEGFLSAAQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -