Basic Information

Insect: Troides oblongomaculatus
Gene Symbol: Znf296
Assembly: GCA_029032895.1
Location: JARDWC010000447.1:4957692-4966131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00032 0.028 15.4 0.4 3 20 189 206 187 206 0.97

2 11 0.00088 0.077 14.0 0.6 2 23 250 271 249 271 0.95

3 11 0.056 4.9 8.3 0.2 2 21 377 396 376 397 0.90

4 11 0.0022 0.2 12.7 3.0 1 23 405 428 405 428 0.94

5 11 7.8e-05 0.0069 17.3 5.4 1 23 448 470 448 470 0.98

6 11 1.5e-07 1.3e-05 25.8 3.3 1 23 477 499 477 499 0.99

7 11 1.2e-07 1e-05 26.2 2.4 3 23 513 533 511 533 0.96

8 11 6.4e-05 0.0056 17.6 3.6 1 23 539 561 539 561 0.99

9 11 8.3e-07 7.3e-05 23.5 0.5 1 23 567 589 567 589 0.98

10 11 4.6e-07 4e-05 24.3 1.3 1 23 595 617 595 617 0.99

11 11 0.00098 0.086 13.9 0.6 1 23 623 645 623 645 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00032	0.028	15.4	0.4	3	20	189	206	187	206	0.97
2	11	0.00088	0.077	14.0	0.6	2	23	250	271	249	271	0.95
3	11	0.056	4.9	8.3	0.2	2	21	377	396	376	397	0.90
4	11	0.0022	0.2	12.7	3.0	1	23	405	428	405	428	0.94
5	11	7.8e-05	0.0069	17.3	5.4	1	23	448	470	448	470	0.98
6	11	1.5e-07	1.3e-05	25.8	3.3	1	23	477	499	477	499	0.99
7	11	1.2e-07	1e-05	26.2	2.4	3	23	513	533	511	533	0.96
8	11	6.4e-05	0.0056	17.6	3.6	1	23	539	561	539	561	0.99
9	11	8.3e-07	7.3e-05	23.5	0.5	1	23	567	589	567	589	0.98
10	11	4.6e-07	4e-05	24.3	1.3	1	23	595	617	595	617	0.99
11	11	0.00098	0.086	13.9	0.6	1	23	623	645	623	645	0.98

Sequence Information

Coding Sequence: ATggcatcatcaaaaaaaaaggttgaaattaaaatagaaGAGTTGTGTCGAACGTGTTTAGCCAAAGAAACAGAATTAATTTCCATCTTTGATATAATTTTGGATACTTCAACGTTGGACGATGTAATATCTTCAATAACAGGAGTACAGATTGAAAAGGATGATGGGTTACCAACAAAAATATGTGAAGAATGTAAAGACAAGGCTGTTAAtgcttataattttaaaagaaaatctcaAGAGGCAGATATGACTCTTCATGATATatttaagaaagaaaaaaatgtctCGACTATAGTGAAAGCTATAAATGCAGagGCAAATGaagatataaatgtaaaattagaaaatcACCAGCAAGATGACAATGAAGACTACATGGATTTGGAATATAATCTCAATTTACCTATTCATAACGATAGCTATGTAGAAATAGatgttaaaaatgaaactagTACAGCAGGCTCTATTTGCTGCATTGCAGACAATGATTCAGATAATTCACAAGATCAACAAAAGGAGAAATGTATAAAAGttgaGTATGTACATAATAGCAGCACCTTTTGTCCACTTTGTGGTACATGCTATGTAGATTCTGATGGTCTTACCAAACACATGTGGGACAGTCATGCTGAGATAATGGGACCAAAGAAGAGGGGTAGGCCGAAGAAAATGGTAACCGATACAATTCTGAATAAACTCTCTGAAAATGggtattatttacaaacaattcCGGTGAAGAGATTGACATGTTCATTTTGCAAAGAGAAATTTAAAACCATGGAGGAATTAGTTGTGCATATGACTGAACATAAAGAAACAAAAGTGTTATGCTGTGTTATTTGTAAGAAAATGTATCTTAAGAAGAAATATTTCGATATACATCTGTGCATCGAGGACAAAATTCAAGGGAGCCATTTACAAGAGaaTGACCCACCCATTGTGCTGCCCAACAAGAGTGAAAGTGAAGATTTCATGATTGAAACATCTCTGAATCAATTGTTAGATCTTAGTAACAATCCAGAAGCGTGTACATCGTGGCAGGCATGCAGTGCGTGCAGTGCACTGCTGGCATCACCGACCGCGCTCGACGACCACGTGGACGCGTTACATCCTGAACTTTCCCTACGCTGCGCCTTATGCAATAAGGTATTCGCTACGGTGAAGTCTGCGAGCCGCCACCGCAGTAAATGCGCGAGTGTGGAGCGCGCGCACGAGTGTGCCAGCTGCGGTCAGCGGTTCGCCCACGAGGTCTCGCTGAACAAGCACATACTGCACAGTCACGCTGGGCAAAGTGTCTCGGTCAAGTTCGTAGCGCGGGCGGTCACCGATGGTCAGAAGTACCAGTGTGAAACTTGCAACCGATGCTTCTTCAGGAAAGACCTGTTAGTGAAACACACGAAGAACCACAAGTCGAGCGACAAGTTTTATGAATGCGATATATGCAAGAAACGTTTTCATAGGAGCGACAACCTGAGATCACATATGCGGGTGCATGGTACGGCGGAAGGGGCCACCGCATCGGGGGCGTGCCTCTGCCTCTACTGCGGCCGCAGCTTCACTAACTCTTCGAATCTCATCGTCCACATGCGCAGGCACACTGGTGAGAAACCATACAAGTGCGACTTCTGTGACAAAGGGTTCCCAAGGTCATCAGATTTGCAATGCCATAGAAGGTCCCACACTGGAGAGAAACCGTACATATGCGGCGTCTGTGGTAAAGGGTTTTCCCGCAGCAATAAGCTGTCAAGACATACGCGGGTGCACACTGGTCTGCGCCCGTATAAGTGTTCGTACTGCGAGAAGGCGTTCTCTCAAAGCAATGACCTGAATCTCCACGTCAGAAGACATACGGGCGATAAGCCCTACATATGCGAGATATGCGGCGATCGCTTCATACAGGGCACTGCGTTACACAATCATAGACGTACGCACGGACATTACCCAACGACGGAGGCGCCGTCTGCTTCGCTGCCTGCTGCTCCTCTACCCTCAGTACTGTTCCCTCCGACGCTCGCGGTCGCGCCCCCGCCCGCTCAAATAATCGCACGCACTCACCGCTAG
Protein Sequence: MASSKKKVEIKIEELCRTCLAKETELISIFDIILDTSTLDDVISSITGVQIEKDDGLPTKICEECKDKAVNAYNFKRKSQEADMTLHDIFKKEKNVSTIVKAINAEANEDINVKLENHQQDDNEDYMDLEYNLNLPIHNDSYVEIDVKNETSTAGSICCIADNDSDNSQDQQKEKCIKVEYVHNSSTFCPLCGTCYVDSDGLTKHMWDSHAEIMGPKKRGRPKKMVTDTILNKLSENGYYLQTIPVKRLTCSFCKEKFKTMEELVVHMTEHKETKVLCCVICKKMYLKKKYFDIHLCIEDKIQGSHLQENDPPIVLPNKSESEDFMIETSLNQLLDLSNNPEACTSWQACSACSALLASPTALDDHVDALHPELSLRCALCNKVFATVKSASRHRSKCASVERAHECASCGQRFAHEVSLNKHILHSHAGQSVSVKFVARAVTDGQKYQCETCNRCFFRKDLLVKHTKNHKSSDKFYECDICKKRFHRSDNLRSHMRVHGTAEGATASGACLCLYCGRSFTNSSNLIVHMRRHTGEKPYKCDFCDKGFPRSSDLQCHRRSHTGEKPYICGVCGKGFSRSNKLSRHTRVHTGLRPYKCSYCEKAFSQSNDLNLHVRRHTGDKPYICEICGDRFIQGTALHNHRRTHGHYPTTEAPSASLPAAPLPSVLFPPTLAVAPPPAQIIARTHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115862; iTF_01494487; iTF_01495200; iTF_00197534;
90% Identity: iTF_01115862; iTF_01494487; iTF_01495200;
80% Identity: -