Basic Information

Gene Symbol
-
Assembly
GCA_029032895.1
Location
JARDWC010000435.1:2376469-2378814[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.2 1.7e+03 -0.3 0.0 4 18 158 172 156 174 0.92
2 6 3.7 5.1e+03 -1.8 0.0 22 33 232 243 230 246 0.86
3 6 2e-09 2.7e-06 27.9 0.1 2 45 264 309 263 310 0.94
4 6 6.4e-10 8.8e-07 29.5 0.4 2 45 317 364 316 365 0.96
5 6 2.3e-09 3.2e-06 27.7 0.0 1 43 369 411 369 412 0.98
6 6 2.1e-08 2.9e-05 24.6 0.0 3 45 421 465 419 466 0.92

Sequence Information

Coding Sequence
ATGAGTTCCGTGGATTTTGATTCAGATGGGAGTGATTGCGATAGCGAAACTGAATTACAAGATTTACGACAGCTTAATGCCGTACTAAATTCTGAGCCACAGACACCTATAGCATCAACATCAAAAGCTCAGTCTTCGACAGCTAGTACTTCCAGTTCGTCTTTAAAAGTGGCTGACGAAATTGCTAAAATAGAAACAGCGATATCTCTGAATAAACTCACTGATGAAAAGTTACGAAAGCTTGAAACAATTTTGCAAGAACGGTTGAAAGAATGTGATCAAAGGTTAGcagatataaaatgtaataaaggtAACAAATTTTTCGACAAAGAAGAATCATTCCGATATGTTAATTGTGGTAAACCTTACTTTAAAGATAAAGAcaattttacaccaccaaaTAATGAAGATACTATTACCATGCAAAAATCGGGGATGTATGACTTTTCAAAAATCACCTCCGTACCTGGCTGGACAGTTAAAGATAAAAGTCAGTTTCttagtttaattgaaaaaatgtCCCAGGAAATACGAATTAAAAGAATTGACTCACAAATTTCCGAGTTAaaacgaaaagaaaaaaataatcctAGTACCagcatggaaaaaaaaattaatttattgcatAAAGAAATTGCAAGTGTTCAAAAAAAGACTTTCAAAGATATAGCATTACCAATCACAGAGGAATATGATTGGGAATATATAGCTAATAAATTAAACCGTAGACATTCAGCAACAGAATATCAGGCTTTGTGGAAATTGTTTCTGCATCctagtataaataaaaccacATGGAGCAAGAGCGAGCACACAAGTTTGCAAAAAATAGCTGctgaaaataaatttcaagatTGGGATGACATAGCAAATAAGCTAGGGACAAACCGTACTGGATACCAATGTTTTGTTTACTTCCGCACCAATATGAGCAACACTTTTACTGGTAAAAAATGGACAAAAGAAGAAGAGGAATATCTGAAAAGGTTAATTGATTTTTATAGAGAGGGCAATTATATCCCATGGGGTAAAGTCGCAACATCAATGGAAAATCGAactaaaatacaaatttataataaatataatagactaATTGAACTAAGGAAAGGAAGGTTTTTACCAGAAGAAGATGCCGTCATACTTACTTGTGTGGACAATTTTGGGACCAACTTCAGAAGAATGACTAGCTATTTACCTGGACGTTCCTTAGCACAAATACGTGTGAGATATCAAATATTATCCAAACAAAGAGTGTCTACAGTGTGGACTACAGAggaagataataaattaattaaactacttGCTAACCAAGAATCGCCCACTGTGTTTTCaactgtaacaaaatattttcctGGCAAAGACAGAATGAATATAAGAAGTAGATATATAACTTTAGTTAAATGGATGAAAACACATCCTGATATGGATATTTCTAAGGCACCACGTAGAGCTTCACGCAGATTAGGACATGGGCGTCCTtcaaataatttgaataaagcCATTGAGAATCTTAAAAAGAGAATAAAGAATGAAGTAGAAGATCGTAAATGCAAAAAAATTACGAAAGATTCACCAGAACATGTTATTGATGATGCTATAATGGCAGCATTAGCTACTCAAATTGCAAAAGATGAAGAAACTAAAGCCATTCAAGAGTATGAACGTGAACAATTAGAATTACCAGATGATACAATTATTTCATCAAAGAATTTAAATGCAACTAATTTAAGGAAacttcttatatttttaaaatctcaattaaataaaactaagctTGCTGAAAGTGAATACTGTAAACAATATCCAGATTTATTAAAAGGTGAGAATGAAGTATCTTTAGTAAAGGTGAAGTCTTATTCAAAGAAAGATGCAATAAAAACTGTTGTAAAAAAGAACCCTGACATATTTGGTGTGAATAGATTAGAAAACTTGAAATATGTTTTACCTCCTCATTACGCTACAATAACTGGATGTAGACAGTTAATGGCTATAGTATCAAATACAAAAATGAGAATGGAATGTGATTTCGACCTTAATGTGTTGATGAAACAAAATCCTTTATTGAAAGAGCATTTCAATCTTTTATTAGAGAGATTTAATGCACTGTTTTTGTGGCCAATGTTACTTTCTAATCAATCGCCGATGTTTGACaaagatgataataaaacaaatcaaatatGCAAACCTATTCCGAAAACAAATGAACCTGCATTGGACATAGGGATTGCCATGCcagaaataagaaataatgtaattaaagagTCAATAGATTTGAATAAATCTGATGTTAGTGAAGGTCAAATAAATCCTAAAGATGCCCTTTtggaaaaaaatgtttcatcCTAA
Protein Sequence
MSSVDFDSDGSDCDSETELQDLRQLNAVLNSEPQTPIASTSKAQSSTASTSSSSLKVADEIAKIETAISLNKLTDEKLRKLETILQERLKECDQRLADIKCNKGNKFFDKEESFRYVNCGKPYFKDKDNFTPPNNEDTITMQKSGMYDFSKITSVPGWTVKDKSQFLSLIEKMSQEIRIKRIDSQISELKRKEKNNPSTSMEKKINLLHKEIASVQKKTFKDIALPITEEYDWEYIANKLNRRHSATEYQALWKLFLHPSINKTTWSKSEHTSLQKIAAENKFQDWDDIANKLGTNRTGYQCFVYFRTNMSNTFTGKKWTKEEEEYLKRLIDFYREGNYIPWGKVATSMENRTKIQIYNKYNRLIELRKGRFLPEEDAVILTCVDNFGTNFRRMTSYLPGRSLAQIRVRYQILSKQRVSTVWTTEEDNKLIKLLANQESPTVFSTVTKYFPGKDRMNIRSRYITLVKWMKTHPDMDISKAPRRASRRLGHGRPSNNLNKAIENLKKRIKNEVEDRKCKKITKDSPEHVIDDAIMAALATQIAKDEETKAIQEYEREQLELPDDTIISSKNLNATNLRKLLIFLKSQLNKTKLAESEYCKQYPDLLKGENEVSLVKVKSYSKKDAIKTVVKKNPDIFGVNRLENLKYVLPPHYATITGCRQLMAIVSNTKMRMECDFDLNVLMKQNPLLKEHFNLLLERFNALFLWPMLLSNQSPMFDKDDNKTNQICKPIPKTNEPALDIGIAMPEIRNNVIKESIDLNKSDVSEGQINPKDALLEKNVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01494250;
90% Identity
iTF_01494250;
80% Identity
-