Tobl015252.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- -
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000427.1:4436185-4438510[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 1.5e-05 25.1 0.0 8 40 2 32 1 37 0.87
Sequence Information
- Coding Sequence
- AATGCTTTGAAAGCTGTTGACACTGGTATTTCACTGAGAAAAGCTGCTGCAGTGTACGGAGTTCCCATAGCTACACTCTCTAGAAAAAAAGGGAACCCTGAAATATCCAAACAAAAAACTGGACCAGCAACTGTTTTTTCTGATACCGAAGAACAAAAAATAGTTGACTGGATTCTTTTTAGAGCTCAGCGTGGTTTACCAGTAACTAAAACAGAGCTCTTGGATTCTATTCAACAATATGTGAAAAAGTCAAAAAAAGAAACTCCGTTTATTGATAGTCGGCCGAGCCGACATTGGTATGAGGGCTTTCGAAAACGACACCCTCAAATGTCAATCAGGAAGCCACAACATCTGACTCATAGTAGAGCAGCAGTGACCGGTGATGACCTGAAAGATTGGTTTGATGAACAAGCTAAgtatttaactgaaaaaaaattaatggagaTTCCTTCTACGAGAATTTTCAACTGTGACGAGACTTATGTAAGTTTATGCCCTCCATCTGAAAAAGTATTGTTAGCTAAAGGATCCCGTTCTGCATATAAGGTGGTTGATTCTGATAAAGAAGGATTTactgtattgtttatgtatagtgCTAATGGTGATCGTGCACCTCCCATGATCATGTTTCCTTATAAAGAAGAAGTACCAGagaaaattgtcaaaaattGTCCTGAAGGTTGGGGTGTTGGGCTCTCAGATAATGGGTGGATGACCTCAGAGTCAttctatgaatatataacaaatatattttacccaTGGCTAGTGAAACAAGGAACTCAGTTTCCAATCGTGTTATATTTGGATAATCATTCATCACATATGACTATGCCTCTGGTTACATTTTGTCGTGAAAAGGGTATTGAGTTGATTGGACTTGTTCCCAACTCAACCCATATAATGCAACCACTtgacattagtttttttcaCCCATTTAAAGAGACATGGAAAAAATCTGTACCAAGATggaaaaattctaaaaatgtttcccgagtaaaaaaagaagattttcCATTAGTTCTAAAGTTTGCATTGGATGCTATGGCACAAGAAAAAAATGCTGTTATCAGTGGATTCAAAGCTGCAGGCTTGTATCCTTTCAATCCTTCTGCCGTTGACTATGATGTatttgataaaagaaagaaatctaAAACAACAGTAACTAAAGAAAATGTACAAGATGAAGTAACAGAAGATAAGGAAAAACATCTATTAACCTTCGAAACCAATTTATCAAAGGATATTCTGGAAGAATTTAATACTGCTTGGTTGAATCAGACATTGCCTAAGGATCTAGAAATTAGAGGCTTGTATAAATACTGGCTTGATGTCAGTGGAAAATCtggtaaagaaattaataacatcttattttaa
- Protein Sequence
- NALKAVDTGISLRKAAAVYGVPIATLSRKKGNPEISKQKTGPATVFSDTEEQKIVDWILFRAQRGLPVTKTELLDSIQQYVKKSKKETPFIDSRPSRHWYEGFRKRHPQMSIRKPQHLTHSRAAVTGDDLKDWFDEQAKYLTEKKLMEIPSTRIFNCDETYVSLCPPSEKVLLAKGSRSAYKVVDSDKEGFTVLFMYSANGDRAPPMIMFPYKEEVPEKIVKNCPEGWGVGLSDNGWMTSESFYEYITNIFYPWLVKQGTQFPIVLYLDNHSSHMTMPLVTFCREKGIELIGLVPNSTHIMQPLDISFFHPFKETWKKSVPRWKNSKNVSRVKKEDFPLVLKFALDAMAQEKNAVISGFKAAGLYPFNPSAVDYDVFDKRKKSKTTVTKENVQDEVTEDKEKHLLTFETNLSKDILEEFNTAWLNQTLPKDLEIRGLYKYWLDVSGKSGKEINNILF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495718;
- 90% Identity
- iTF_01495719;
- 80% Identity
- iTF_01495718; iTF_01495721; iTF_01495719;