Basic Information

Insect: Troides helena
Gene Symbol: stc
Assembly: GCA_029286815.1
Location: JAGSMV010000014.1:10368623-10378514[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 2.8e+04 -4.3 1.6 15 19 477 481 476 481 0.81

2 15 0.099 9.1e+02 0.6 1.7 2 10 509 517 509 517 0.92

3 15 0.00047 4.4 8.0 18.9 4 19 525 540 523 540 0.93

4 15 1.8e-07 0.0017 19.0 11.5 1 19 576 594 576 594 0.97

5 15 2e-05 0.18 12.5 14.2 1 19 635 653 635 653 0.99

6 15 3.6e-06 0.034 14.8 10.3 1 19 694 716 694 716 0.87

7 15 3 2.8e+04 -5.3 2.2 6 10 746 750 746 750 0.94

8 15 0.0049 45 4.8 7.4 1 11 756 766 756 767 0.95

9 15 0.063 5.8e+02 1.3 0.3 4 10 771 777 770 778 0.93

10 15 5.5e-06 0.05 14.2 14.0 3 19 785 801 783 801 0.92

11 15 3 2.8e+04 -7.2 6.1 7 10 837 840 829 841 0.41

12 15 0.00053 4.9 7.9 9.0 9 18 847 856 845 857 0.92

13 15 2e-08 0.00018 22.0 12.8 1 16 893 908 893 916 0.90

14 15 0.00036 3.3 8.4 11.5 1 18 923 945 923 946 0.87

15 15 0.3 2.8e+03 -0.9 0.7 1 12 955 966 955 966 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	2.8e+04	-4.3	1.6	15	19	477	481	476	481	0.81
2	15	0.099	9.1e+02	0.6	1.7	2	10	509	517	509	517	0.92
3	15	0.00047	4.4	8.0	18.9	4	19	525	540	523	540	0.93
4	15	1.8e-07	0.0017	19.0	11.5	1	19	576	594	576	594	0.97
5	15	2e-05	0.18	12.5	14.2	1	19	635	653	635	653	0.99
6	15	3.6e-06	0.034	14.8	10.3	1	19	694	716	694	716	0.87
7	15	3	2.8e+04	-5.3	2.2	6	10	746	750	746	750	0.94
8	15	0.0049	45	4.8	7.4	1	11	756	766	756	767	0.95
9	15	0.063	5.8e+02	1.3	0.3	4	10	771	777	770	778	0.93
10	15	5.5e-06	0.05	14.2	14.0	3	19	785	801	783	801	0.92
11	15	3	2.8e+04	-7.2	6.1	7	10	837	840	829	841	0.41
12	15	0.00053	4.9	7.9	9.0	9	18	847	856	845	857	0.92
13	15	2e-08	0.00018	22.0	12.8	1	16	893	908	893	916	0.90
14	15	0.00036	3.3	8.4	11.5	1	18	923	945	923	946	0.87
15	15	0.3	2.8e+03	-0.9	0.7	1	12	955	966	955	966	0.70

Sequence Information

Coding Sequence: ATGTCCCAGTGGAATAATTCATACGTTTACAACAACCAGTATCAAGGACCACCCAATGGATGGAATGGGGATGTTAATGGTCAATATATGAATCATCCCTATTATGGTACCTCACAATTTGATTCAAATAACCAGTATGTAAGTTTTGAAGAGTTCTTATCGCAAATACAAAGTAGTAGTGTTTCACAAAATAATACCCCTACTTACAGTAATGTACAGTACCCGGCCTACCCAAATAATCAATATGGTTATCAAAATGTATCTGCACAAAGTGCTGAGATGGATTTTAACTATGGAGCTGGTACTTCAAATGGCAGTAGCAATGTAGACATTTTTCCAGCAAATGTTCAGAGTGAATATAACCCTGTGTTACCAGATCCAAATTCTTATACAAATGACATTGTTATTAAATCCAAACTTACACCAACTGCTACAGAATTTGTGCCAAAAAGTTCAATGAATGCAGCATCCATGTCACAAAATAACCCTTCTCAAGAACAACAAAACTTAGACAATGGTACAAATGATACTAGaagcagtaatataaaattattagaaactaACTGGAGGGAAAGACCATCTAACAGTGATACATCAAACTCTCAAGCCGACACAAACAGTTTCAATCGctttcaaaaatattataaaaatgtagatGCAAACAATCGAAACCGTGAGTCCAATATTCGTTTTGATAATAAACGTACTAATCAAAGTAATGAATCATATCAAGAGTCCAATAGTCGTCACCATAATACTGGTAATAGTCTTAACCCTAACAGTCATAATcttcaaacaaattattataataaagaaacacCTTTACAAAACAGTGAAACAGAAAGTCAAGCTATGGAGTCTCTATCCGATCCTAATGATCGAAACTATGACACTGGTAAccgaaatgaaaataaaaaacatacaaatgaTAACAATCAATCAAAACCAAATtccaaaagtaaaaataaagatcAAGAGGCTGGTAGAACTTTCTATAATAGCGCTATAAACAAAGGCAGTCAAGATGTAAGGAATGGGAGGGGTGAGAACTCTGGGAGACAACGAAACTGGGTCGGCAGCCAACGAGTTAGAACTTTGGATCGTAATGTTTTAGAAGATGAACAGTATGCTAATTCATATATGCAACATAAGGATGATAGAGTTGAAAGAGTTATTAAAAACGAGAAGACTGCTAGTCCTAATAGAGGAAAAACAAAAACCAACAATGACTCATCAGGGAACACAGCCATGACACAGAGAGAACGTTTGAGTGATCAGCTAGATAAGGGAACACTGGAATGTCTAGTGTGTTGTGAACGAGTCAAACAAACTGATCCAGTCTGGTGGTGTTCTAATTGTTACCATGTATTACACCTTAGATGTATTAGAAAATGGGCAATGAGCAGTTTAGTTGAAGGCAAATGGCGTTGCCCAGCATGTCAAAACACAAATGAAGAGATACCAACTGAGTATCGTTGCATGTGCGGCGCGATCAGATCACCAGAATACGCGCGTGGTTCAGTTGGAGCACACACATGTGGGAAGTCCTGTCGTCGACCAAGGATTTGCCCGCATCCTTGCACATTGCGTTGCCACCCAGGACCTTGTCCTCCTTGCCAAGCTACCATTAGCAAGCAATGCGGTTGCGGTGCTGAAACGCGATCTGTACTGTGCAGTAGTAAATTGCCCCAGCTATGTGGTCGCGAGTGCAAACGCATGCTGGCGTGCGGAGTACACCAGTGCCAACGCGAATGTCACGACGGTGCCTGTGATGATTGCACAGAAACAGTTACGCAAATATGCCACTGTCTTGCGGCGAAGTCTCGCTCTGTCCCGTGCACGTCGGAAACGGGCACGTCGACCACTTGGTCTTGCGGTGCAGCGTGCGCGCGTGTTCTCCCGTGCGGTGCGCACGTGTGCCGGCGCGTGTGCCACCCACCGCCTTGCGCACCGTGCCCACTGCGCCCTGAGAACGTGCGCTCCTGTCCATGCGGCAATACTAGAATCGAAAAAGATCAACGGAAGTCGTGCAGTGACCCAATTCCTTTATGTGGGAACATCTGTGCAAAGCCTTTACCCTGCGGACCAGAAGGAGACAAACACTTTTGCAAGCAGTTGTGTCATGaggGTGCTTGCGCAGCATGTCCCGACAAGACTTTATTGCCGTGCCGTTGCGGCCATTCCAGTCGCGAAGTGCCCTGCTCTGAATTAGCGGAAAATACCAACAATGTACTGTGCCAGAAAAAATGTAACAAGAAACTATCTTGCGGTCGCCACCGTTGCCGCACAGTGTGCTGCGCTGCCCAGTCCCACCGCTGTGCTGTGGTGTGTGGGCGTACGCTCTCCTGTCAATTGCATCGCTGCGAAGAGTTCTGTCATACTGGCCACTGTGCTCCTTGCCCGCGAGTCAGCTTCGAAGAGCTGCATTGCGAGTGTGGCGCGGAGGTCCTACTGCCACCGGTGCGCTGCGGCACTCGGCCGCCATTATGTCACGAGCCGTGCCGACGCGAGCGGCCCTGCCACCACCCGCCGCACCACGCCTGCCACACCGGTGACTGCCCGCCCTGTGTTGTGCTCACCACCAAAGCATGCCACGGACAACATGAGgaGCGAAAAACTATACCATGTTCTCAAGAAGAGTTCTCATGCGGTCTGCCGTGCGGGAAACCACTACCATGCGGAAAGCACACCTGCAATAAGACATGCCACAAAGGCCCTTGCGATACTGAAAAatGTAAGCAGGCCTGCACTGAGAAGCGTGGGGCTTGTGGCCACACGTGTGCGGCGCCGTGCCACGTGAACAACGGGGGTTCATGCCCCAGCAGCTCGCCGTGCAGGCGGCTTGTACGCGCGACCTGCCCGTGCGGCCGGCGCACCGCCGAGCGCACCTGCCACGAAAACGCACGCGATTATGCAAAGATTATGAGCACATTAGCGGCAACGAAAATGCAAGAGGAGGGTACTGTAGATCTGTCTGACGTACAACGACCTGGTGCAATGTTGAAGACGCTGGAGTGCGACGACGAGTGCCGCATGGAGGCGCGCTCCCGTCAGCTCGCGCTCGCGCTTCAGATCCGGAACCCAGACGTGTCTGCGAAGCTCGCGCCGAGGTACAGCGAGCACGTGCGCGCGACCGCCACTCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCTCCGAGCTGGTGCAACGCGCCAAAAAGTCGAAGCAAAAGACCCGCGCGCACTCGTTCCCGTCTATGAACCGACAGAAACGGCAGTTCATACACGAGCTATGTGAGCACTTCGGATGCGAAAGCGTGGCGTACGACGCCGAGCCCAACAGGAACGTGGTGGCAACAGCGGACAGGGAAAAGTCGTGGCTGCCGGCGATGAGTGTTTTGGAGGTTCTGGCGCGGGAGGCGGGTAAGAGGCGTGTACCCGGCCCGGTACTACGCTCTCCCGCCACCGCCGCTAACACAGCACCCATGACCACACCCACAACATCCACCAGCAGATCGACGGGGGGTTGGGCGACTTTGACATCCACAAACGCTTGGGCATCCCGAAGCCAGCCACGAACGAACGAGAAGCCCAAAGTGGACTATTTCGACAACCCACCAACCAACTAG
Protein Sequence: MSQWNNSYVYNNQYQGPPNGWNGDVNGQYMNHPYYGTSQFDSNNQYVSFEEFLSQIQSSSVSQNNTPTYSNVQYPAYPNNQYGYQNVSAQSAEMDFNYGAGTSNGSSNVDIFPANVQSEYNPVLPDPNSYTNDIVIKSKLTPTATEFVPKSSMNAASMSQNNPSQEQQNLDNGTNDTRSSNIKLLETNWRERPSNSDTSNSQADTNSFNRFQKYYKNVDANNRNRESNIRFDNKRTNQSNESYQESNSRHHNTGNSLNPNSHNLQTNYYNKETPLQNSETESQAMESLSDPNDRNYDTGNRNENKKHTNDNNQSKPNSKSKNKDQEAGRTFYNSAINKGSQDVRNGRGENSGRQRNWVGSQRVRTLDRNVLEDEQYANSYMQHKDDRVERVIKNEKTASPNRGKTKTNNDSSGNTAMTQRERLSDQLDKGTLECLVCCERVKQTDPVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPTEYRCMCGAIRSPEYARGSVGAHTCGKSCRRPRICPHPCTLRCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQLCGRECKRMLACGVHQCQRECHDGACDDCTETVTQICHCLAAKSRSVPCTSETGTSTTWSCGAACARVLPCGAHVCRRVCHPPPCAPCPLRPENVRSCPCGNTRIEKDQRKSCSDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGACAACPDKTLLPCRCGHSSREVPCSELAENTNNVLCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGAEVLLPPVRCGTRPPLCHEPCRRERPCHHPPHHACHTGDCPPCVVLTTKACHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCNKTCHKGPCDTEKCKQACTEKRGACGHTCAAPCHVNNGGSCPSSSPCRRLVRATCPCGRRTAERTCHENARDYAKIMSTLAATKMQEEGTVDLSDVQRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRATATREPAFAQHVHDCLSELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRSPATAANTAPMTTPTTSTSRSTGGWATLTSTNAWASRSQPRTNEKPKVDYFDNPPTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00250144;
90% Identity: iTF_01494752;
80% Identity: -