Basic Information

Insect: Troides helena
Gene Symbol: GATA-B
Assembly: GCA_029286815.1
Location: JAGSMV010000022.1:79182-83340[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.6 1.2e+04 -3.5 0.7 22 26 23 27 12 30 0.63

2 4 5 1.7e+04 -3.9 0.8 18 26 521 529 518 531 0.75

3 4 1.7e-17 5.7e-14 52.0 3.9 1 34 543 575 543 577 0.97

4 4 9.7e-19 3.3e-15 56.0 7.1 1 34 609 641 609 643 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.6	1.2e+04	-3.5	0.7	22	26	23	27	12	30	0.63
2	4	5	1.7e+04	-3.9	0.8	18	26	521	529	518	531	0.75
3	4	1.7e-17	5.7e-14	52.0	3.9	1	34	543	575	543	577	0.97
4	4	9.7e-19	3.3e-15	56.0	7.1	1	34	609	641	609	643	0.97

Sequence Information

Coding Sequence: ATGGTGGCGTATGATCTCAAGTTTCTATTCAACTGCCTCCGCTTGGGCACCCCACGAGCTAGCCAGGCGTGCCAGGCGTGCCAGGCGCACGAGCTGTTCCGGCTCCCCGCACCCGCACCTGCGCTCTGCGAAATCTTTGCCTCCGCGGTACCTCCTTACAAGGATGcagtaaagtataatatatggaTTAGTAAAACAACGTGCACGTGCTCAcacggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtcgcgcggccggtggCAGCGTTAGGTCGGTGCACCGCGCTCGGAGTGACATGCGAGGTATCGGTTGCGGCGGCGGGAGGCCGGGCGCTGACGCGGTGTGTTGCGCATGCGCAGTCGACGTGGCCGAGTTTTACACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGTCGCCCCGCCCGCGCCCGACATGGGCACGAAGCGGCCGGGCATGTCGTGCAGCAACTGCCACACCACGACCACCTCGCTGTGGCGGCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATCAACCGACCCCTCGCCATGAAGAAGGACTCGATACAGACTAGGAAACGAAAACCAAAGAATAGTATGAAAGGAGAAAGGAATCTCAGCAAAACCAGTTCGCACGGCgtgcacgcggcgcacgcggcgcacgcgacGCACGGCGCACACGCGGCGCACGGCGCGCACTCCGTGCCCTCAGCGGTGAAACTTGAAAGCTTATTGGACAACAGCGCGGGCGTGGGTAACGTGACCAACACGGGCAACGTGGGCAACGTGGGCAGCGCGGAGAGTCGCGCGGCGCTCGCGCTCGGCTACTACGTACAGCACGCCATCAAGATGGACGAGCCGCCGccagcgcacgcgcacgcgcacgcgcacgcgcacgcgcactcgcacGCGCTTGCgacgcacgccgcgcacgccgctcACGGCACGCACATGTACGAGGAGGAGTACCGGCGGGCGGagggcggcgagcgcggcgcggcCGTCTCGCTGGCGAGCTGA
Protein Sequence: MVAYDLKFLFNCLRLGTPRASQACQACQAHELFRLPAPAPALCEIFASAVPPYKDAVKYNIWISKTTCTCSHGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGRAAGGSVRSVHRARSDMRGIGCGGGRPGADAVCCACAVDVAEFYTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAVAPPAPDMGTKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKGERNLSKTSSHGVHAAHAAHATHGAHAAHGAHSVPSAVKLESLLDNSAGVGNVTNTGNVGNVGSAESRAALALGYYVQHAIKMDEPPPAHAHAHAHAHAHSHALATHAAHAAHGTHMYEEEYRRAEGGERGAAVSLAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -