Basic Information

Insect: Troides helena
Gene Symbol: Zfy1
Assembly: GCA_029286815.1
Location: JAGSMV010000007.1:2619584-2624515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.061 5.8 8.2 2.9 1 23 235 257 235 257 0.96

2 20 0.00022 0.021 15.9 2.0 2 23 264 286 263 286 0.92

3 20 1.9e-05 0.0018 19.2 2.5 1 23 292 314 292 314 0.97

4 20 6.3e-07 6e-05 23.9 2.3 1 23 320 342 320 342 0.99

5 20 0.00078 0.074 14.1 0.6 1 23 348 370 348 370 0.98

6 20 9.3e-05 0.0088 17.1 3.4 1 23 376 398 376 398 0.96

7 20 0.028 2.6 9.3 3.6 2 23 405 427 404 427 0.91

8 20 0.26 24 6.2 0.3 2 23 472 492 472 492 0.96

9 20 8.7e-06 0.00082 20.3 0.6 1 23 498 521 498 521 0.95

10 20 8.6e-06 0.00081 20.3 8.8 1 23 527 549 527 549 0.97

11 20 0.00026 0.025 15.6 0.1 1 23 555 577 555 577 0.98

12 20 0.00012 0.011 16.7 0.2 1 23 583 605 583 605 0.96

13 20 0.0013 0.12 13.5 0.8 6 23 615 632 613 632 0.96

14 20 0.83 78 4.6 2.9 1 23 670 691 670 691 0.96

15 20 0.0024 0.22 12.6 0.3 2 23 840 862 840 862 0.96

16 20 1.3e-05 0.0012 19.7 1.2 1 23 868 890 868 890 0.98

17 20 3.9e-05 0.0037 18.2 1.0 3 23 898 918 898 918 0.98

18 20 0.0034 0.32 12.1 3.3 2 23 925 946 924 946 0.96

19 20 0.00049 0.046 14.8 2.1 1 23 952 974 952 974 0.97

20 20 0.0003 0.028 15.5 3.8 1 23 979 1002 979 1002 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.061	5.8	8.2	2.9	1	23	235	257	235	257	0.96
2	20	0.00022	0.021	15.9	2.0	2	23	264	286	263	286	0.92
3	20	1.9e-05	0.0018	19.2	2.5	1	23	292	314	292	314	0.97
4	20	6.3e-07	6e-05	23.9	2.3	1	23	320	342	320	342	0.99
5	20	0.00078	0.074	14.1	0.6	1	23	348	370	348	370	0.98
6	20	9.3e-05	0.0088	17.1	3.4	1	23	376	398	376	398	0.96
7	20	0.028	2.6	9.3	3.6	2	23	405	427	404	427	0.91
8	20	0.26	24	6.2	0.3	2	23	472	492	472	492	0.96
9	20	8.7e-06	0.00082	20.3	0.6	1	23	498	521	498	521	0.95
10	20	8.6e-06	0.00081	20.3	8.8	1	23	527	549	527	549	0.97
11	20	0.00026	0.025	15.6	0.1	1	23	555	577	555	577	0.98
12	20	0.00012	0.011	16.7	0.2	1	23	583	605	583	605	0.96
13	20	0.0013	0.12	13.5	0.8	6	23	615	632	613	632	0.96
14	20	0.83	78	4.6	2.9	1	23	670	691	670	691	0.96
15	20	0.0024	0.22	12.6	0.3	2	23	840	862	840	862	0.96
16	20	1.3e-05	0.0012	19.7	1.2	1	23	868	890	868	890	0.98
17	20	3.9e-05	0.0037	18.2	1.0	3	23	898	918	898	918	0.98
18	20	0.0034	0.32	12.1	3.3	2	23	925	946	924	946	0.96
19	20	0.00049	0.046	14.8	2.1	1	23	952	974	952	974	0.97
20	20	0.0003	0.028	15.5	3.8	1	23	979	1002	979	1002	0.95

Sequence Information

Coding Sequence: ATGGGTGAAGGCTTACAGAATAACTTAGCTGAGAagatacaaaaacatttaccAATAAAGgtcACAGAAGAAGATGTCCTACCAAGAGTGGTATGTTACCAGTGCGCCAGCACCCTTTTGGCTTGGCATGAACTTGTACAATGCTGTGTACAGGCTGACAATGCACTAAAGACCCGGTTGACTGTTATACTTGctAAGGAAGAACCATCTAACAATGAAGATAAAAACTTGGAGATGGAAACCAAAGAAAAATGGACACCCAGCTACGCCAGCTTGGGTATGTACCACACGAAAGTACCGGAAATACACGATAATAAAATTGTGAGAGACTCGGACAGATTCGATACTGTGTCCGCAGCTTCGAGTATTGACCTTGATGACGAATCGGCTGACGATGACCAGCCACTAGCTAAATTAGCGGCTAAAAAGACAACCGATTTCTACAATAAGTTCTATGAAGCCCTTGTTAATTTCAGAAATCATTTTGTCACGGATCATAAAcggaatagtaatgtttatccAGAGTTTACAGACTCTAGTGACTCCGAAGAGATATTGGATGATAATAAAAGTGAAGATGGCAATGAGGATGTAAGTAAATTTGACGACTTGACTCAACATAACATGCGTAAAGACAGAATGGATGAAGAGACAAGATTAGAACTAAACGAAGTTCAGGTGAAGATTAACGGAAAGTTGTATTTTACATGCAAAATATGCGATAAGAATTTGAGCTCAGCGCACACCTACATCTTTCACAAGCGGATCCACACGGGCGAGCGACCATGCGTTTGTCACATATGTGGCAAGCAGTTCCGAGCACCCAACGGTTTACAGAGGCACTTGACGGAAACCCATCAGCGCTTGCGCCGACACTCGTGTAGCTTCTGCCCGAAAAACTTCGCGAACACGCAGAATCTCAAACAGCATATCCGCATCCATACCGGTGAGCGTCCGTATGTTTGTTCACAATGTGGCAAGCGGTTCACGCAGAGCGGATCCCTGCACGTGCATTTAAAAACGCACAGCGAACAGTTCCCATTCCAGTGCGCGGAATGCGGCGCCAAATTCAGACTGCGATTGGGTCTTACGAGGCACAGGTTAAAACATACCGGCGAACGGCCGCACGTGTGTACACAATGCGGTAAAGGCTTTCGGCAAAAGCACGACCTCTACAGCCACGCACTGTCCCACACTGACCCGAAGCCGCACAACTGTATCATCTGTAACGCTGCCTTCCGACAAAGGAGAGCCCTGAAGCACCATTATAAAAGAGTGCACCAAAGTGAACCGTCGGGAGATATCGTAGACGTGAAAGTAGAATCGAGTGATTTCGTAAATAACACCACGCAAGAAATACTTGGGAGTATCAACAAGCCGCTTATAATAGAGGAGGAAGGAAAAAAATATGCGCAATGTGGTATATGTAAAAAGAATGTATCGCTGGGCTCGTACAAACGTCATGCGCGTGCGCATCTCGGGGAGAAGAGATACAGCTGTCACACCTGCGGGCTCGCGTTCAACGACAGTGGAAACTTGGTAAGGCATACAAAAGCCCTGCACGTGAAACAACGCCCTTTCTGCTGTCACATATGCAACAAAACGTTCACCAGGAGCAGCCACCTACAAGACCACGTAAAATCCCATTCCGAAAGCCGAAACTATGTCTGCGATATTTGTGGGAAAGCGTCGAAATCTGGTGCCGCTTTACGGATGCACCGGAAAGTACACGAAGGGGAATGCAAGTTCGATTGcctgcaatgtggtgctaaatTCAAACGCCGCGGAGAACTAAAAGCCCACGTGACAGTCCACACCGGAGAGAAGGCTTACGTGTGCTGGTGCGGCAAATCTTACCGTCTGCGGAGCCAACTCACCGGCCACATAAAAACACACGAAGTTTCATTAAAACAGGAAGATAATGCCACGTCTTTTTTAGCTGACGGGCCCGCTTTGTTGCAGATTCGAGAATCGCACGGAATTTGTGGTCCAATCGAGGAACGTGTATTCCACTGCCACGAATGCGATGCGTATTTAGATAGAAAAGATTTCATTGTTCACATGTCTATGCACGCAGTTCATTGCGTAACAACCGACGGCGACAAGCAAACTGGGAAGAGGATAAAGAAACTCGGAAAAGAGAAAAACAGCAAAGATAAAAAAGACCACGGGGTGAGCGTGGAACAAAAATTAACCAATACTGATCATAATTTGGAGAAAACTGTAAAAAACTGTCCGACAGTCAATTCTAATAGCAAAGAGACAGTAGAAAACGAATTTTCAGATCACAGCGACGTTGAATATTTTGGACGACTACCAGAATCAGTTTTCGAGGCGATTGAAGACTCACAGGATAGCAAGCATGATGATAATACTTGTTCGTCTCCAGTAGACAACGGTCCCAACGGAAATATAGATACATACAGGAGAAGGTGCGATTCacaacaatcatcatcatgtcCAAATCCTCCCGCTGTGACTCTGAAAAAAGCtaaaaagaaacataaaaaacaGCGTACATGTCCAATTTGCTCGAAAGTGTACACGGCGGCATCGAGCTACTTCTACCACTTGAAAAATTCTCACCAACAGAGTAAAGAATACGAGTGCGACGTCTGCGGGAAGAAATTCCAAAATAGGAGCACACTGGCACAACACGCGTGCGTCCACGATGCGGAGCGTCGCTTGGGATGCAAGGAGTGCGGGAAGCGATTCAAATCGAAGGCCAGCCTATACATCCACGAGCAAAGTCACACTGACGTGAGGAGCTGGTCCTGCGACCAGTGCAGCAAATCGTTCAGATGGCGCACGCACTTGCTGCGACACGTGAAACGGCACGCGGCCGAGCGGTCCCACGTCTGCGCGACATGTGGGCGTGGCTTCAACGTGCGCTGCGACCTGCTGCGACATGCGCGTACACACGCCGCCGGCAGCCACGCCTGCGACGAGTGCCACATGAAGTTTGCGCAGCAGAGATATCTCAGGGTGCACATGCTGAAGAAACATTGCATAAAAATTTCTACAACACAAtcagataaataa
Protein Sequence: MGEGLQNNLAEKIQKHLPIKVTEEDVLPRVVCYQCASTLLAWHELVQCCVQADNALKTRLTVILAKEEPSNNEDKNLEMETKEKWTPSYASLGMYHTKVPEIHDNKIVRDSDRFDTVSAASSIDLDDESADDDQPLAKLAAKKTTDFYNKFYEALVNFRNHFVTDHKRNSNVYPEFTDSSDSEEILDDNKSEDGNEDVSKFDDLTQHNMRKDRMDEETRLELNEVQVKINGKLYFTCKICDKNLSSAHTYIFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHQRLRRHSCSFCPKNFANTQNLKQHIRIHTGERPYVCSQCGKRFTQSGSLHVHLKTHSEQFPFQCAECGAKFRLRLGLTRHRLKHTGERPHVCTQCGKGFRQKHDLYSHALSHTDPKPHNCIICNAAFRQRRALKHHYKRVHQSEPSGDIVDVKVESSDFVNNTTQEILGSINKPLIIEEEGKKYAQCGICKKNVSLGSYKRHARAHLGEKRYSCHTCGLAFNDSGNLVRHTKALHVKQRPFCCHICNKTFTRSSHLQDHVKSHSESRNYVCDICGKASKSGAALRMHRKVHEGECKFDCLQCGAKFKRRGELKAHVTVHTGEKAYVCWCGKSYRLRSQLTGHIKTHEVSLKQEDNATSFLADGPALLQIRESHGICGPIEERVFHCHECDAYLDRKDFIVHMSMHAVHCVTTDGDKQTGKRIKKLGKEKNSKDKKDHGVSVEQKLTNTDHNLEKTVKNCPTVNSNSKETVENEFSDHSDVEYFGRLPESVFEAIEDSQDSKHDDNTCSSPVDNGPNGNIDTYRRRCDSQQSSSCPNPPAVTLKKAKKKHKKQRTCPICSKVYTAASSYFYHLKNSHQQSKEYECDVCGKKFQNRSTLAQHACVHDAERRLGCKECGKRFKSKASLYIHEQSHTDVRSWSCDQCSKSFRWRTHLLRHVKRHAAERSHVCATCGRGFNVRCDLLRHARTHAAGSHACDECHMKFAQQRYLRVHMLKKHCIKISTTQSDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -