Basic Information

Gene Symbol
-
Assembly
GCA_029286815.1
Location
JAGSMV010000023.1:1178405-1180009[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-08 8.6e-05 23.2 2.3 4 43 8 63 6 66 0.86
2 2 9.4 1.5e+04 -3.2 0.0 17 28 161 172 155 177 0.74

Sequence Information

Coding Sequence
ATGCCATTGAATGCCGTGGGCTGGACCACAGAGGAGGATGAGAGACTTGTTGAACTAGTCCAACCACAGCcatgtttgtataattattttgacccttctagaaaaaatatattggcTCGTGAATCTACATGGCAAGAAATAGCTCAAGCTCTATCGAAGCCAGTTGAAGAATGCAAGAAACGCTGGCGTGGTCTCCGAGATGGCTTCATGAGAAGTATGCGCTTAGGCACTATACATAAAACTAAAGCCAATATATTTGAGAAATTGCAATTTCTAGCAGCGACCTCACTGGAAAGCACTGACGAACCAAAAGAAATCTCCTTGAACATGGATGATGATCCAGTACAAGAAGAGACTGTGGTAGGAACAGAACAAGTCATTACTGACAACCAAGAGTATTATGagattACAGTTGTTGATGGTCCACAAGAACCTCCAGTAAAACAGAATGCTTATATAAGAATCTTACCAAAGCTTGAACAGAATTTAGGTGAACCACCTAAAAAAGTAAGTAGAAGGGGTGCAGGTAGAAAGAAAACTATACCTGCCCCGAGAAATGTGCCACCTGTTAAAATCCTACCAAAACCGCTAATCATGAATGGTCCTAAAACTTATGTTAGGTATGTAGAAGATCCAAAAACACCAGAGCAAAGATCTCAAGTCATAGACAAGTTAATAGAAAAAGTTCTCAAAGAAAATACTAATGAAATTGATGTATTCTTTAGAAGCATGGCTGCtagtgttaaaaaattacaaccaAATTTAATTCCTAAAGTTAAAATGGAAGTTTGCAATGTTATAGCCAAATATGAAATGCAaagttttgataaaaatttacaaaatatgcaATGA
Protein Sequence
MPLNAVGWTTEEDERLVELVQPQPCLYNYFDPSRKNILARESTWQEIAQALSKPVEECKKRWRGLRDGFMRSMRLGTIHKTKANIFEKLQFLAATSLESTDEPKEISLNMDDDPVQEETVVGTEQVITDNQEYYEITVVDGPQEPPVKQNAYIRILPKLEQNLGEPPKKVSRRGAGRKKTIPAPRNVPPVKILPKPLIMNGPKTYVRYVEDPKTPEQRSQVIDKLIEKVLKENTNEIDVFFRSMAASVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKNLQNMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01115652;
90% Identity
iTF_01115652;
80% Identity
iTF_01496535;