Basic Information

Gene Symbol
Myb_1
Assembly
GCA_029286815.1
Location
JAGSMV010000025.1:3737481-3753050[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.9e-17 9.6e-14 51.8 0.8 1 45 45 89 45 90 0.97
2 3 6.8e-22 1.1e-18 67.6 1.6 1 46 96 142 96 142 0.98
3 3 4.8e-20 7.8e-17 61.7 0.5 1 44 148 191 148 193 0.96

Sequence Information

Coding Sequence
ATGCTGGAGATTAGAGATAAGGACAGACGTAGCGGCTATGACTCTGAAACAAGTGAGTATTCGGAGGACTCGACAACGTACGACGATGGGCCGGCTACAACCAAAGGCACTGGGCAGAGGAAGAATATCAACAGGGGACGCTGGACGAAAGAGGAGGACAAAAGGCTCAAAATGTACGTGAGAATGTATAACGACAATTGGGAAACAATTGCCGCCCAATTCACCGACCGGTCTGATGTCCAATGCCAACAGAGGTGGACGAAGGTCGTCAATCCGGAACTAGTCAAGGGACCATGGACGAAAGAGGAAGACGAAAAGGTTATGGACTTGGTAGCCAAATACGGTCCGAAGAAATGGACGTTAATTGCAAGGCATTTAAAGGGCAGGATAGGCAAACAATGCAGGGAGCGGTGGCACAATCACCTAAACCCTTCAATCAAGAAGACAGCGTGGACGGAACACGAGGACAGGGTCATATACCAAGCGCATAAACAGCTTGGTAACCAGTGGGCCAAGATTGCCAAGCTATTGCCGGGCAgaaCCGATAACGCCATAAAAAATCATTGGAACTCGACGATGAGGAGAAAATACGAACCAGAACTGTTGGACAGTTACGAGAACATCCGGCGGAAACAAGCGCGGAATTTGCAAGATCCATTCAATGATTCAGCAAAGAGTAATTCTTCAAATCAGTCGACTTCCAAGCCAGTGCTGCATTTTAGGCAACTGTTAAAAAATCAGCTACACAACTTACAGCAGCAAACACATGGGCACAAATCGCCAGATAGAAGAGGTTTGGTACCAGCTGACAGTATTGAAATTATAGAAACACCTTTTAAATACGCCACCATAGATACAATGCAAGCGGAATCACcgactaaaaattatttgtcaCAAACAATATCTTCTGAAAATGATATTCAAAACTCAGGGTCTTTCGCAATGCAAACGGACTCAAACAAAGATGGGTCATCAGTTTATACATCGCCTAAGAAAAAATTTACAGAGTCGATCAGTCCGCCCCCTATTCTTAGGAGAGGGAAGGTCAAAAAGACTCATATCACTGCTAACCCCAATCCTTGGTCCGACGTTATACAGAAAGCGATAGAATCTCGAGACACCGGTATCACTCCTATCAAAGCTCTTCCGTTCAGCCCGTCGCAGTTCCTGAACTCACCAGCTGGAGTTTCGTTTCCGACGTTCGACTCCACACCGCTCCGGACATATGGCaagGAATGGGTAGCCAGTCCGTTACTTAATACACCAACGCCGGCGAATATAACCCCCGGCGGAAGTCAACTGCGCAACATTACGCCTAAAACGCCGACGCCATTTAAAATAGCAATGGCGGAACTTGGCAAGAAGTCGGGATTAAAATACGAGCCGTCTAGTCCGGGGCTGCTGGTAGAAGACATAACGGAAATGATTCAGAGGGAGGAGAACTCTGATAGCACTGTGCAATTGAACGACTCCATGTTGTCGTCCACCGCTGACCAGGAGGCGAACGGTCAGGTGAATGATTCGGGCATTGGCAGCGCCAGAAGGGGCAAGGAGAACATACCGTCGCATAAGCGCGCAAGGAAAGCGCTTGCGACCAGCTGGGGAGCTGCGACGAGTACGCCTCATGCTTCGCACGTGCACTCCGTGCAAAGCGTACAACTTGTTGTACCCGATGTGTCATTTATCATCGAGACACCGAGTAAAActcttgctggagacagttCAGTTCTCTTCTCACCTCCGTCGATTGTGAAGAATTCACTTTTAGAAGAATCCACGAGCCTTCACAGCCTGATGAGTGCTGAGAACACACCAGAGAACGTTAGATACGAGGAGATCGACATAGAGTCAGTCATCACAGAGAAAACAAAGGTACAACACCGGTCCGTCCATACTAATCCCACACCTAACACCTACAATCCGTACGATGTGGTCTATGACCATATTGACCCTAATCAGGATGTGTTTAGGAACATAACGAACCTACAGCCAACAAGCTTAGGCTCAACGAACCTAGAGTCGCCTAGGACGTTCGCGCGGCTAAACGCGGAGAGGTTACGCACCATAACGTCAACTAACGAATTATCATGCGATAGCGGTAACAGTACGCTTATAGCACCCAAAGAGGTCCTAGCTAACGCGCTTGCGGACCACATATACAAGGTGACAAACCAGAAACCGTCTACTACATGCATAAATCATATATtgactaataaaataatgacaaataaaaatgataatcaTCAAAAGGAGAACCAATGGTGGCAGGAGAAGGATTCAGGGACAGACGGCATGTTCTCTAACGACTATTACATGTTCTAA
Protein Sequence
MLEIRDKDRRSGYDSETSEYSEDSTTYDDGPATTKGTGQRKNINRGRWTKEEDKRLKMYVRMYNDNWETIAAQFTDRSDVQCQQRWTKVVNPELVKGPWTKEEDEKVMDLVAKYGPKKWTLIARHLKGRIGKQCRERWHNHLNPSIKKTAWTEHEDRVIYQAHKQLGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEPELLDSYENIRRKQARNLQDPFNDSAKSNSSNQSTSKPVLHFRQLLKNQLHNLQQQTHGHKSPDRRGLVPADSIEIIETPFKYATIDTMQAESPTKNYLSQTISSENDIQNSGSFAMQTDSNKDGSSVYTSPKKKFTESISPPPILRRGKVKKTHITANPNPWSDVIQKAIESRDTGITPIKALPFSPSQFLNSPAGVSFPTFDSTPLRTYGKEWVASPLLNTPTPANITPGGSQLRNITPKTPTPFKIAMAELGKKSGLKYEPSSPGLLVEDITEMIQREENSDSTVQLNDSMLSSTADQEANGQVNDSGIGSARRGKENIPSHKRARKALATSWGAATSTPHASHVHSVQSVQLVVPDVSFIIETPSKTLAGDSSVLFSPPSIVKNSLLEESTSLHSLMSAENTPENVRYEEIDIESVITEKTKVQHRSVHTNPTPNTYNPYDVVYDHIDPNQDVFRNITNLQPTSLGSTNLESPRTFARLNAERLRTITSTNELSCDSGNSTLIAPKEVLANALADHIYKVTNQKPSTTCINHILTNKIMTNKNDNHQKENQWWQEKDSGTDGMFSNDYYMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00197310;
90% Identity
iTF_01496494;
80% Identity
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