Basic Information

Insect: Troides aeacus
Gene Symbol: -
Assembly: GCA_033220335.2
Location: CM067271.1:9500880-9507979[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.3 2.2e+02 3.2 1.0 1 23 54 77 54 77 0.94

2 20 0.2 19 6.6 4.7 1 23 84 107 84 107 0.97

3 20 2.8 2.7e+02 3.0 3.8 1 23 183 205 183 205 0.97

4 20 0.0015 0.15 13.2 1.0 2 23 211 232 210 232 0.97

5 20 0.8 76 4.7 1.0 1 23 238 260 238 261 0.94

6 20 0.12 12 7.2 4.1 2 22 509 529 508 529 0.96

7 20 0.12 12 7.2 2.0 2 23 786 807 785 807 0.97

8 20 0.0048 0.46 11.7 0.7 2 23 887 908 886 908 0.97

9 20 0.82 78 4.6 0.4 1 23 916 938 916 938 0.95

10 20 0.11 10 7.4 3.4 1 23 971 993 971 993 0.95

11 20 6.2e-05 0.006 17.6 4.2 1 23 1001 1023 1001 1023 0.99

12 20 0.13 12 7.2 2.8 1 23 1106 1128 1106 1128 0.99

13 20 0.32 31 5.9 1.3 1 19 1184 1202 1184 1206 0.93

14 20 1.4 1.3e+02 3.9 0.2 1 23 1212 1234 1212 1234 0.95

15 20 0.004 0.39 11.9 1.8 1 23 1302 1324 1302 1324 0.95

16 20 0.013 1.2 10.3 1.1 1 23 1330 1352 1330 1352 0.96

17 20 0.006 0.58 11.4 2.6 1 23 1441 1463 1441 1463 0.97

18 20 0.00015 0.014 16.4 1.4 1 23 1469 1491 1469 1491 0.99

19 20 2.1 2e+02 3.4 2.1 1 23 1583 1605 1583 1605 0.96

20 20 0.019 1.9 9.8 3.7 1 23 1616 1638 1616 1638 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.3	2.2e+02	3.2	1.0	1	23	54	77	54	77	0.94
2	20	0.2	19	6.6	4.7	1	23	84	107	84	107	0.97
3	20	2.8	2.7e+02	3.0	3.8	1	23	183	205	183	205	0.97
4	20	0.0015	0.15	13.2	1.0	2	23	211	232	210	232	0.97
5	20	0.8	76	4.7	1.0	1	23	238	260	238	261	0.94
6	20	0.12	12	7.2	4.1	2	22	509	529	508	529	0.96
7	20	0.12	12	7.2	2.0	2	23	786	807	785	807	0.97
8	20	0.0048	0.46	11.7	0.7	2	23	887	908	886	908	0.97
9	20	0.82	78	4.6	0.4	1	23	916	938	916	938	0.95
10	20	0.11	10	7.4	3.4	1	23	971	993	971	993	0.95
11	20	6.2e-05	0.006	17.6	4.2	1	23	1001	1023	1001	1023	0.99
12	20	0.13	12	7.2	2.8	1	23	1106	1128	1106	1128	0.99
13	20	0.32	31	5.9	1.3	1	19	1184	1202	1184	1206	0.93
14	20	1.4	1.3e+02	3.9	0.2	1	23	1212	1234	1212	1234	0.95
15	20	0.004	0.39	11.9	1.8	1	23	1302	1324	1302	1324	0.95
16	20	0.013	1.2	10.3	1.1	1	23	1330	1352	1330	1352	0.96
17	20	0.006	0.58	11.4	2.6	1	23	1441	1463	1441	1463	0.97
18	20	0.00015	0.014	16.4	1.4	1	23	1469	1491	1469	1491	0.99
19	20	2.1	2e+02	3.4	2.1	1	23	1583	1605	1583	1605	0.96
20	20	0.019	1.9	9.8	3.7	1	23	1616	1638	1616	1638	0.98

Sequence Information

Coding Sequence: ATGCTACAACAGATGTCCTCGTCGCCGAGCGCGCACGTCGGCGAGGTCGCTACTATCTTGCGCACCCTCGAAGGCCGCCTGTACGGCGACGCGTCCTCTGAGGGCTCCTCCGACGCCGCCGAAGACTTAGAACTGCCACAGTGCAAGATTAGAAGGAACTACAGCTGCACCAAGTGCACGTTTTATACACAGAACCCGCGAGCTTATCTTATCCATACGCGTGACATACATTTCGTGAAGCTTAAGATTTATGACTGTGCCCATTGTGTTTACGCTTCGCGGCATCATCAGAAACTTGTGAGGCACATGAAAATGGTCCATGGAGAGATCGCTGCTGAAAAACAAAATGAGACAGAGCAACCATCCTCGGCCATAAGCACTACCGAGACATCAGAAAAGGAAGAAGATTTAATAGAGGAAGTAGAAGAGTATGATGATATGCAAATGGAAGTGGAAGATTGTGGGGACGAACTGATGGATCGGTTAGACGTAGACGGAGATGTATCCGCTTCCGACAACACTAACACAAAAACTAAGGGTAATTTTTACTCATGCGACAAATGCAATTATGTGACACATATAAAAGCTAGGTACACGAAGCACGTCAAATATCATTCAATGCCAATGATAAAGTGCACCATGTGTGATTTTCGAACACCATACAAATGGAATTTGGATCGCCATATGAAGAACCATGGTGGAACAGGAAGCTTCAGCTGTTCAATATGTAACTTTACGGCCGACATCAGGCAAAGTTTGACAGTACACGAAATGAATCATCACACGCCGCCGGTGGGGCAGTCTACTTCGAGCCGGCGTCGCAACCGTGTGGGTGCCAGCGACCTGAGTCTCGCTGAGGAAATAGTGAACGGGAGCCCGCTCGTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGATCCTCGCACTCGGCCTCGGAAATGGGTTTACAATATGCAGAAAGAGATATAGCCAGTTCTAATAGTGACTCTAATGATGCCGCTACTTCCGAAACGTCTACCAAAAACGAGTTGCATCTTATGCTTTCTAATCACAATCAAGAATTAATTAACGGACTGGAAGACTCAAAGTCCAATAAACACAGTAGAAAGATACCTAGACCAATTCCACAGCTCATACCACTAAATTCATCGACACCAAACCAAAACAAAAATTCGCCTGGAGAGCCACCAGCAAAAAAGTTAAAAGACTCAAATTCATGCGATTCTCCAGATTCAAGCAGTTCCAATAGATTGGATTGTGCACAAcctgaaattttatttacaccGACAGCAAGCTGTGCTAATAACACAAAAGAAACGACAACACGCAagaaaaataattcattttttGATAAACTAAAAGAAAGATTACTTACCGAGACAGGAGAAGAAGGCTCCCTCAGATGTAAAAATTGCGGATTTGAAAGCAAGTGCCTGTCCGAACATTCTGTCCATGAAAAGTCTTGCTCCAATCATTCTAATCGAATTCTAGCAAATACAACGATGTCAAGTTTAAGTTCAACAAGATGTCAAAATTGTAGACATCGGTGTAAATCTAGTGCAGATCTCTTTATTCACATGAAAACTTgcaagaagaaagaagaaaatgaaaCTAAAGAAGTCCCAATAGAAACCCAAGATAGCAATGAAGCTGCATTTGAGAATCCAGAAAAAGAAGTTGAACCGCATCCAATGGAGAATGTTGTATTTGTttggaataatataaatagagaaTCGAGTAAGTTCGATACACCTCTTGATATAAGTATCAATGATGATTCAACTCTTCCAGAACCTCCTCAAAGTTTTGATTCTGAAATAGTAGACGAAAATGACAGCATGAATTTATCACCGAGTCAAGCCATCGGTAAGAAAGTATTCAAGTGTCCACATTGTTTATTTTGGGCATCAACCGCATCTAGATTCCATGTCCATATTGTAGGACATCTAAATAAAAAACCATTTGAATGCTCCCTGTGCAAATATAAATCCAATTGGAGATGGGACATAACGAAGCACATTAAACTGAAGTCCGCTAGAGATCCTGATCACGCTGAAGCTAAAGTGTTGATGACAGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTGGCAATGCCAATATTGAATGAAAATGGCGAAAATGAATTCCGTTATATTGATCAAAACAACACTTTTGAGGGCGCTTTAGAAATTGATGAATCTTTTAACGAAATTAATGAAAGTACAAATATGTCAACGGACATGCAACCTCTTAACTTACAAACTCAAAACAGCGATTATAGATATAGTTTAGACAACAGAAACCAGGACATGAAAAGATTAGGGCTTCTAAAGACTTTATGGAAATGCAAGAAATGTAACTACAGGCACTCTTCAAAAGAAGCTTTATTAGAACATGTCCGAGAACATTCTAAGCCTGTTTATGAAGAACAAAAACCTCAAAGTCCCGTAGTAATAAAGAAGCCTGAAAGCGTACCAGATCCAGCTGACTTAGCGTATCGCTGTGGACATTGTAATCAGTTATCGAATTGGAAACACGTTATACAGagACACTGCAGACTCAAACATGACGGTGTTATAAAGGTTGTAACTACGGTGAAGCCAAAAATAGAGGGATCAGGTTTATCAAATGAACTTGTATCCGACACTTGTACAAAGTGTCCTTATAAAAGTAACGACAGGACTACACTGATCATACACATGCAACAACACCAACCTTCACCTCAATCCATATTTAAGTGCTATTTCTGTCCATTTTACGTGAAAGACGAACAAGAATTAGTTCAACATCTTGTTTTACATGGTATCACCGAACCCGAGGATTATATAGCGAAAGCAATGGGCTGCAAATCTCCCTTGCCTGACCAACAAGGATTGCAATCTACTTCAACCAAGAGACACAAATGTACAGAGTGCCCTTATGAAACAAACAGCAAGTCTCAGTACATGTATCATGAACAATTTCATCGACTCCCCGCAGATACGCCATACAAATGTCCGGAGTGTAACTACAGTGTATCCAAGAGACATTTGCTTcatcaacatatgagagttCACGGTATTGTATCAAAAAAGGGTGAAGTAGATACAGAGTTAGAACCATCGGTGTCTATTTCTTATAAGACTGAAAACAAATCCGACAACAATCTCGCTGAAATTCCTTTTGTGTGGGTATCCGCGAAGAATGAATTCcacaaaatgtataaatgtcGTTATTGTTCGTATGTTAATACTCAAAAATGTAAAATACCCAATCATGAGAAAATACATTGCATTATGTTTGGTAACAACGAAATATTAGTGTATAAATGTTTAGATTGTAAATTTACATGCGATAACGCTGGGAGATTGTCTGAGCATTCGAAAACACATGGCGAAATATATGGACGCATTTATTGCCCAGTCGAGCTTGACATTCCAGACGAAGAGCAGATAGCAAAGTTACGAAAAGtaattgaaatagaaaaaatgaACACAACTGACGACATTGCAAAGGAGGAATGTATAGGAgttgaaaacaaaataataaaaaccttgTACTTCTGTCAACAATGCCCAGCCCGTTATTTTACAGAAAGCGAGTTAAAAGTGCATGACAAATTTCACGATCTTGCATTTGcgtataaatgtaaaaattgtatattttcgGTATTCCAGGAGAGTGAATTAGCTGCACATTCTATAGTTCATTCCGATGAATatcatacaaaaacaaaaatgttgaaaTTTATTCACAATATGCATCCAGCCCACAAAGAGCCCCAGTTAGAAGTTGTACATTGTGGTGAGACTTATGATATAACCTGGATTGTTACCAATCCTGGCAagaattatgaaattattgataATCCACATAAAAAATCTCATGAGGGTAAACATGTTCCAAAACAATTTCATTGTAAAGAATGTCCAGCAAAATTCTTTAAGAGCTCCGCTTTAAATTATCATATGGGTTTGCATGATGGCGATGGCGAACACAAATGTAAGAAATGCAGCTATGCAGTCAAAAATATTGGAAATTTGGCGAAACATGAGTTGTTACACGATAGCGAAGGTAAAACATCCTGTGATTATGAATCTGGCGAGGATATGGACTATAAAAATATCCCATTATCAGGCACAGATCTATTTCAAAGAAAGACTGAAGCTCAAAAGAGAGTACTAAATGAGAAAGATAAGCTTGTGAAACCCAATGATCATTTCCCGCCCGTTCTTCAGGCTGATCCTCAGTTTGGTTATTTGATGCATGGTAACCCTGAATTTGTTTATCCAACATACTTGAAAAATGGCCGACAAAAAGAGAAACGATACAAATGCCACAAATGTCCATCGGCCTTTGAAAAAAGGGAACAATATAAAATTCACTTGTCATTGCATGGTTCCAAACAAAGGTACAAATGTGAACTCTGCGACTATTCTGTAAAGTATTATGCAAACTATGTTCAACACATGCGAAAACATCAGAAGAACGATGAAGCGGTAGCCGAGAGAAGAAAGGGCAGTGATGATTCTCCAGAATGTATACCGACAGAAAATAAAGATGATAAAGGTACGGATAACATTAAGTTAGCAATAAAAACTATGCCCAAAAGTTTACCTAAAAGCGATTTCCAGCAGTTTTCAGTTAGCGATCAACAAACACTTAGATTGTTACAACGGAGATGTTCTTTAAATAATTCGGCGAATGATGTAAACCCAAACGATGCGGCTGCACCAACTAAAGATCGGAAACTACATTCGTGCTTCCTTTGTCCTTATACAAACCAGCGTCAGGATGCCTTGGGTAATCATTACCGAAGGCATGATAAAAATGATGCCTTCAGTAATGGACATCACAAATGTTCATTCTGTGACTTGGCTGTTGTACAGTCGCACTTTCTAAGAGACCATCTAAAAACtcattttaattatcaaaaaaCTCTAACGCCTGAATGCTACGTCGCTAACGAAGATGTTAgatttacaataacaaaattagaCAATGAAGACATTATGACTGATCTCAAATTAGATTTGCAAAGCAAGATGGATGTGTGTAAAGAAGACAAAacatttgttaaaattaaaacaggaGAGTTATTAGTGAATGCAAAATAA
Protein Sequence: MLQQMSSSPSAHVGEVATILRTLEGRLYGDASSEGSSDAAEDLELPQCKIRRNYSCTKCTFYTQNPRAYLIHTRDIHFVKLKIYDCAHCVYASRHHQKLVRHMKMVHGEIAAEKQNETEQPSSAISTTETSEKEEDLIEEVEEYDDMQMEVEDCGDELMDRLDVDGDVSASDNTNTKTKGNFYSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFSCSICNFTADIRQSLTVHEMNHHTPPVGQSTSSRRRNRVGASDLSLAEEIVNGSPLVPKEEEGSGDSRSSHSASEMGLQYAERDIASSNSDSNDAATSETSTKNELHLMLSNHNQELINGLEDSKSNKHSRKIPRPIPQLIPLNSSTPNQNKNSPGEPPAKKLKDSNSCDSPDSSSSNRLDCAQPEILFTPTASCANNTKETTTRKKNNSFFDKLKERLLTETGEEGSLRCKNCGFESKCLSEHSVHEKSCSNHSNRILANTTMSSLSSTRCQNCRHRCKSSADLFIHMKTCKKKEENETKEVPIETQDSNEAAFENPEKEVEPHPMENVVFVWNNINRESSKFDTPLDISINDDSTLPEPPQSFDSEIVDENDSMNLSPSQAIGKKVFKCPHCLFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHAEAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFRYIDQNNTFEGALEIDESFNEINESTNMSTDMQPLNLQTQNSDYRYSLDNRNQDMKRLGLLKTLWKCKKCNYRHSSKEALLEHVREHSKPVYEEQKPQSPVVIKKPESVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVVTTVKPKIEGSGLSNELVSDTCTKCPYKSNDRTTLIIHMQQHQPSPQSIFKCYFCPFYVKDEQELVQHLVLHGITEPEDYIAKAMGCKSPLPDQQGLQSTSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGIVSKKGEVDTELEPSVSISYKTENKSDNNLAEIPFVWVSAKNEFHKMYKCRYCSYVNTQKCKIPNHEKIHCIMFGNNEILVYKCLDCKFTCDNAGRLSEHSKTHGEIYGRIYCPVELDIPDEEQIAKLRKVIEIEKMNTTDDIAKEECIGVENKIIKTLYFCQQCPARYFTESELKVHDKFHDLAFAYKCKNCIFSVFQESELAAHSIVHSDEYHTKTKMLKFIHNMHPAHKEPQLEVVHCGETYDITWIVTNPGKNYEIIDNPHKKSHEGKHVPKQFHCKECPAKFFKSSALNYHMGLHDGDGEHKCKKCSYAVKNIGNLAKHELLHDSEGKTSCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNEKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFVYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQKNDEAVAERRKGSDDSPECIPTENKDDKGTDNIKLAIKTMPKSLPKSDFQQFSVSDQQTLRLLQRRCSLNNSANDVNPNDAAAPTKDRKLHSCFLCPYTNQRQDALGNHYRRHDKNDAFSNGHHKCSFCDLAVVQSHFLRDHLKTHFNYQKTLTPECYVANEDVRFTITKLDNEDIMTDLKLDLQSKMDVCKEDKTFVKIKTGELLVNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01130403;
90% Identity: iTF_01130403;
80% Identity: -