Basic Information

Insect: Troides aeacus
Gene Symbol: -
Assembly: GCA_033220335.2
Location: CM067281.1:1032806-1035713[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00017 0.016 16.2 1.1 1 23 304 326 304 326 0.98

2 10 1.3e-05 0.0012 19.8 1.6 2 23 369 390 368 390 0.96

3 10 3.2e-05 0.003 18.5 0.4 1 23 394 417 394 417 0.94

4 10 0.0012 0.12 13.5 3.6 1 23 420 442 420 442 0.98

5 10 8e-05 0.0076 17.3 0.4 2 23 525 546 524 546 0.95

6 10 0.59 57 5.1 0.4 2 23 566 588 565 588 0.91

7 10 2.1e-06 0.0002 22.3 2.3 1 23 594 616 594 616 0.98

8 10 0.00046 0.044 14.9 2.4 1 23 621 643 621 643 0.97

9 10 0.00018 0.017 16.1 3.0 2 21 650 669 649 672 0.93

10 10 0.56 54 5.2 1.5 3 19 712 728 711 733 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00017	0.016	16.2	1.1	1	23	304	326	304	326	0.98
2	10	1.3e-05	0.0012	19.8	1.6	2	23	369	390	368	390	0.96
3	10	3.2e-05	0.003	18.5	0.4	1	23	394	417	394	417	0.94
4	10	0.0012	0.12	13.5	3.6	1	23	420	442	420	442	0.98
5	10	8e-05	0.0076	17.3	0.4	2	23	525	546	524	546	0.95
6	10	0.59	57	5.1	0.4	2	23	566	588	565	588	0.91
7	10	2.1e-06	0.0002	22.3	2.3	1	23	594	616	594	616	0.98
8	10	0.00046	0.044	14.9	2.4	1	23	621	643	621	643	0.97
9	10	0.00018	0.017	16.1	3.0	2	21	650	669	649	672	0.93
10	10	0.56	54	5.2	1.5	3	19	712	728	711	733	0.89

Sequence Information

Coding Sequence: ATGAAGTTAAGCGAAATGGTCTGGGACTCGGAAATGGTGTATCCGGTGCTGTTTATGCCGAAGAATTGCACGTCAATAGCACAGAATATCAAACTTACCGACGACGTATTTATATTCTTAAGTATCAGGTCATTCGACATCGAACATAAGGAGACCATTTTTTACTCGGGTTACTGTAATATCAAGCTGGTAGAAAAATGCGAAATCCACGTACACGACATTCAGTCTACGATAACCCCGGAGGACAAAAGTCTGCAAACTGTTGAAGTGCCAGCGGAGATACCGAGTCAAGATGAATTTTTTTACCCGTACACCCAGTCTCAAGTATGGATAGACCCGTTGCGAAGCCCCTTTATATACAATGATTATAAAACGAATGGATCACAGGGGAATATTTCTATATGTCATAAAAGCCAATCCAACCATATAACATTGAATCAACATAATACCTACATAACGCAAAATGTATACAATTACTCGGAACCCCTTTATGAACTGGACAGTAGTAAAAATAGAAAGATCACATATGACAACAATATGGCCCAACAGATCAGTCCGACTGACGCCGAACTGAATAGTTTGTATGAAAATGATGACTTTGAATATGAGATTCTTATGTCACAGCTGCCtgaagaaataaatgaaaacatggTAGAGGACACAATGGAAATAGATCAAGTAGAATTGCAGACTGAAAATGATGCTTTGAAGCAGCTTATGTCGCCAGGGATACAATCAACGTCCAAGCAGCAAAAGACAATACTGTTTCTGGGCAATGAATCCGTCTCTGGGCAGACTGTTGAGAAGATTGCTGTCAATGATCCATCAGTTGAATGCATGGAGACAGAAGTTCAACATGATGTAGCCATCGATAAGTTAGagAAAAGGGACAGGTCTGCGCACAAAAAGTATCAATGCGAAAAATGTAAGCAGATATTCGATCAATTGGCCACTTTCAAGCAGCACATGGTGAGCCACCGGAACAAGGCAGCACAAGCCGTTAAAGAAGATGAGGGCAACTTGTTCTGCTCTCTCTGCAACAAAAAGATGAAAACTCGGGAGAAGTACGAAACACACTGCGCCGGCCACGGCAACCCGGATCTAGAATGCGACAAGTGTTTCAAAGTGTTCGCGTCTAAGTCCAGTTTGCGCACTCACCGCAAGTTGCATATGAGGAAATATCCATGCGATCTCTGCACGAAGTCTTTTTCGAAGCAAGTAGAACTGAAGGCACATTTTGCCAAAGCGCATTCAATGCACAAGTGCGACTCGTGTAATTACATGACTTACAATCAGAAGCAGTTGCAAGCACATCAGAACAGTCACATGGACTGCGCGGAGAGCGATGACCAACTACTCAGCGTCATCTACAAGGatattgaaaacaataaaatcgctgaaaataaagaaaaagaagaatataaaaCTACCAAAGTACAGAAAAAGCCAAAAAAGAGCATCACGGAGAAAGAGATACTGACTGATGCAGATGAAGTCATTTCTAAAATTATATCCAGTAAAATTTTTTTGCTAAATTCCAAGGCGGCTAGAAAAGAAAAGGGATTTAATAAgAGCTGCGAAGTGTGCACAAAATCATTCGACCGTATTGGAGATTTGAAGAGGCATCTCATAGAGCACATTGTTAACAACACCCTATCAAAAAATCCAGTGGACAAAAACGGAGCTCTGTCCATCGAGTGCGAGGTCTGCAGAGAGGCGACCTTCACGAAAACGGACAAATACAAGGAGCACCTGCGCGAGCACGCGAAGCTGACGCTGTACCAGTGCGCCATCTGCTATAAGTCGTTCAGCGACTCGAGTAACTTTtcgaaacataaaaaaatccaCGGCTCCACGTACTACCAGTGCGATCTCTGCCAGAGAAAATTCAACTCGAAGAAGATGATCACACAACACATGGACTATCACAAAAAGAACTCGCCGTTGGAGTGTTCGTATTGCGACAAAGTGTTTTACTTCAAGTCGATGCTGAACAAGCACGTCAAGTGCATGCACGTCAAGGAGTCCTTCACGCGCTTCCGCTGCCGCTTCTGCCACCAGTATTACAAGAGCCTGAAGGAGAAATGGGACCACGAGTGGTACGTCCACAAAGTGAGGAAGGTCGTCGCGGATTGCTTCGCTTGCGATGCGAAATTCCGGAAGTACGCCGAGCTGAAGAGACACTGCAACGCTGTCCACAACTTGGACATTCCGAGCGCCAAGAAGTTGGAAGAACTAAACCGCGAGATTTAA
Protein Sequence: MKLSEMVWDSEMVYPVLFMPKNCTSIAQNIKLTDDVFIFLSIRSFDIEHKETIFYSGYCNIKLVEKCEIHVHDIQSTITPEDKSLQTVEVPAEIPSQDEFFYPYTQSQVWIDPLRSPFIYNDYKTNGSQGNISICHKSQSNHITLNQHNTYITQNVYNYSEPLYELDSSKNRKITYDNNMAQQISPTDAELNSLYENDDFEYEILMSQLPEEINENMVEDTMEIDQVELQTENDALKQLMSPGIQSTSKQQKTILFLGNESVSGQTVEKIAVNDPSVECMETEVQHDVAIDKLEKRDRSAHKKYQCEKCKQIFDQLATFKQHMVSHRNKAAQAVKEDEGNLFCSLCNKKMKTREKYETHCAGHGNPDLECDKCFKVFASKSSLRTHRKLHMRKYPCDLCTKSFSKQVELKAHFAKAHSMHKCDSCNYMTYNQKQLQAHQNSHMDCAESDDQLLSVIYKDIENNKIAENKEKEEYKTTKVQKKPKKSITEKEILTDADEVISKIISSKIFLLNSKAARKEKGFNKSCEVCTKSFDRIGDLKRHLIEHIVNNTLSKNPVDKNGALSIECEVCREATFTKTDKYKEHLREHAKLTLYQCAICYKSFSDSSNFSKHKKIHGSTYYQCDLCQRKFNSKKMITQHMDYHKKNSPLECSYCDKVFYFKSMLNKHVKCMHVKESFTRFRCRFCHQYYKSLKEKWDHEWYVHKVRKVVADCFACDAKFRKYAELKRHCNAVHNLDIPSAKKLEELNREI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01495280; iTF_01496027; iTF_01496800; iTF_01115955;
90% Identity: iTF_01495280;
80% Identity: -