Basic Information

Insect: Troides aeacus
Gene Symbol: -
Assembly: GCA_033220335.2
Location: CM067286.1:1085661-1092023[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.024 2.3 9.5 3.7 1 23 407 429 407 429 0.97

2 9 3.2e-06 0.00031 21.7 1.5 1 23 476 499 476 499 0.97

3 9 0.022 2.1 9.6 0.0 3 23 506 526 505 526 0.97

4 9 3.5e-06 0.00034 21.5 3.7 1 23 532 554 532 554 0.98

5 9 6e-05 0.0057 17.7 0.7 3 23 561 581 560 581 0.99

6 9 2.4e-05 0.0023 18.9 2.9 1 23 590 612 590 612 0.98

7 9 3.2e-06 0.00031 21.6 0.8 1 23 618 641 618 641 0.94

8 9 0.17 16 6.8 0.4 1 12 647 658 647 670 0.85

9 9 0.037 3.5 8.9 2.4 1 23 678 701 678 701 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.024	2.3	9.5	3.7	1	23	407	429	407	429	0.97
2	9	3.2e-06	0.00031	21.7	1.5	1	23	476	499	476	499	0.97
3	9	0.022	2.1	9.6	0.0	3	23	506	526	505	526	0.97
4	9	3.5e-06	0.00034	21.5	3.7	1	23	532	554	532	554	0.98
5	9	6e-05	0.0057	17.7	0.7	3	23	561	581	560	581	0.99
6	9	2.4e-05	0.0023	18.9	2.9	1	23	590	612	590	612	0.98
7	9	3.2e-06	0.00031	21.6	0.8	1	23	618	641	618	641	0.94
8	9	0.17	16	6.8	0.4	1	12	647	658	647	670	0.85
9	9	0.037	3.5	8.9	2.4	1	23	678	701	678	701	0.96

Sequence Information

Coding Sequence: ATGTTGCACAACAGTGGTCCTTTTGGACCGAGCGACGTTCCAATCAACATGGGCGCGCCAGTAAACATGACCCCGATGAGTGGTGCAATGAACAtagcaaataatataaataatttgtcaaAAATTTCCCAACAGCCTCCAGAGGCACCTAATGCGCATTATCATATGCCGAGCTATCCGACGTATGGGCATCCACACTTGAACATGAATCCTGCAATGAGTCCCTTTCCAAACTACTCTCACATAGGCTTTCAACCTAATTATATGTCGCAAAGTCCTTCGGGAGTTCACGAGACCAATTGGCAGAACGGTATGTTACCTATGAGTTTGAACATGCAGAGTGATaatgttacattaaattattcgACCTCGGCCACAAAAAGATCTGAACCTATGAATGACTACAGAGACCACacttttcataataaaatgCCTATACATGTGCCTCAGGTGCACACTAAAGCATTCCATAAACATCTTAGTATGGAAACTAACCACTATAACCATTATCAGCACTACACGCCTAGTCCAAGTAGCTTTAAGCACTATGCAGATTGTAATCTAGATTTGAGCACTAAATCTAGGATAGATATGGATCCAAGGCGAAAAAGCTTAGAGACAACTGTTAAATTAATTGAGAACATTCTAATTAATAGTAGTAGAAAGAATGATAGCATTTCAAAACCAACAACAAACATAGACACTTCCTATATGGAATCTAAACAGGCATGTTCTGTTCAATCCTATTCAAATGATGTAGATCCTCTTAAAATGGACTCACCTAAACCCTCTGAAGTAAATCAAGCACATCATGATAGCAAAAGTAATTCTGAAGATAAAGAACCAGAAATAGAATCTAAAGATGATGAAAGTAGCTCTGATTCTTTGATAGAAAAAGAAGATCTCTTACCAGCTTCCCCAAAAGTGCAGAATCTAGATCATGATTACTCAGATGCAGAGAGTGAAGCTGTACCAGAAGATCTCACTGCATCATCTAATTCGTGCAAAGCAAATGTACAAATAGACACCGATGTTGAAATAAAAGTAGAGCCAACCAGTTGGGTTGATGCAGATTTAATAAATCCATTCCAAAGGGATGTGAATGGAGTGTCCATGGAAAATGTGactattgaaaatattgtaCAAAGTGATATAAGTGTGGATGAGGCaaagaatattgtaaaaaatgGGTTATTGACAGGTTCCCAGGAGAAGTATTTTGAATGTCCACATTGTAATTTGCTTTTCAATCATCCCAAGAGATTTCTTGTTCATTACAAATGGCATTTTTTTGGTCTCAACACTGTGAAAAAGCTTGACTTGGCAAGAGAAAAGGAGTTAAGGAAAACCATGAGGAGAGAAGCAAGGGTTATACAAAGGATGAATATGAATGAAGTGAAAGATATGAGTTCAACAGGCAAAAAATATTCTTGTAAGGACTGTGATAAAGTCTTCAGTGCCAGAGGCAGTTTGAAAAATCATAGACAGAGGTATCATCCTACTCGCATACGTGACTGCAAGATCTGTGGCAAGACGGTCCTGGGCTGGATAGCTCTGCGCGCGCACCTGTCAACACACACCAGCGATTCGGGCTACCAATGCAGCGACTGCCCTAAACGGTTCAAGTACTCCCACTCTTTGGCAAAACATAGGGACACACATTTAGAAAAAACTCATGGCTGTGAGCAGTGCCCGAAGAAGTTTGGTTCCGAGAAGCTGCTGAAGATGCATATGAAGACTCACGAAAGAGTCTTGAGAGGGACCACCTTCCATTGCACTTACTGTGGAAAAGGTTTCTTCGAGTCTTACAGTTTACAGGTTCATGAGCGAACACATAGAAATGAAAGGCCATTCCTTTGTGAAATCTGTAACACCAGCTTTGGCACCAACTCAAGCCTGAAGAGGCATCTTAAAGTATCGCACAGTACGTCGAAGCCGTTCGAATGTCAGACCTGTCACCGGTCATTCGTGTCGGAGGTAATACGCGACAGGCACGAGCAGCGCCTCCACGGGGACCCCGACAGCTTCAAGTTCCCATGCAACCAATGTCCATGCAGATATCTTAAAGCTAAAGATCTAAGAAAGCACATGTACAAAGCACACCCCAAAGGGAAGCGGAAGAAGAAAGTTCACAGTGACAGCGAATAA
Protein Sequence: MLHNSGPFGPSDVPINMGAPVNMTPMSGAMNIANNINNLSKISQQPPEAPNAHYHMPSYPTYGHPHLNMNPAMSPFPNYSHIGFQPNYMSQSPSGVHETNWQNGMLPMSLNMQSDNVTLNYSTSATKRSEPMNDYRDHTFHNKMPIHVPQVHTKAFHKHLSMETNHYNHYQHYTPSPSSFKHYADCNLDLSTKSRIDMDPRRKSLETTVKLIENILINSSRKNDSISKPTTNIDTSYMESKQACSVQSYSNDVDPLKMDSPKPSEVNQAHHDSKSNSEDKEPEIESKDDESSSDSLIEKEDLLPASPKVQNLDHDYSDAESEAVPEDLTASSNSCKANVQIDTDVEIKVEPTSWVDADLINPFQRDVNGVSMENVTIENIVQSDISVDEAKNIVKNGLLTGSQEKYFECPHCNLLFNHPKRFLVHYKWHFFGLNTVKKLDLAREKELRKTMRREARVIQRMNMNEVKDMSSTGKKYSCKDCDKVFSARGSLKNHRQRYHPTRIRDCKICGKTVLGWIALRAHLSTHTSDSGYQCSDCPKRFKYSHSLAKHRDTHLEKTHGCEQCPKKFGSEKLLKMHMKTHERVLRGTTFHCTYCGKGFFESYSLQVHERTHRNERPFLCEICNTSFGTNSSLKRHLKVSHSTSKPFECQTCHRSFVSEVIRDRHEQRLHGDPDSFKFPCNQCPCRYLKAKDLRKHMYKAHPKGKRKKKVHSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01495246; iTF_01495994; iTF_01115912; iTF_00249920;
90% Identity: iTF_01495246; iTF_01495994; iTF_01115912; iTF_00249920;
80% Identity: -