Basic Information

Gene Symbol
-
Assembly
GCA_033220335.2
Location
CM067268.1:7064998-7067205[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.082 1.1e+02 3.7 0.0 2 18 112 128 111 132 0.90
2 6 4.5 6.1e+03 -1.9 0.0 22 33 188 199 169 211 0.79
3 6 3.8e-11 5.1e-08 33.5 0.1 1 45 219 265 219 266 0.91
4 6 1.6e-11 2.2e-08 34.7 1.2 2 44 273 319 272 320 0.96
5 6 1.2e-10 1.7e-07 31.9 0.0 1 45 325 369 325 370 0.97
6 6 4.5e-10 6e-07 30.1 0.0 3 45 377 420 375 421 0.96

Sequence Information

Coding Sequence
ATGAGTCTCACAGATTTTCATATTATAGACAGTGATTCTAGTAGTGAAAATGAATTGCAAAATTCACTACGGTATAATGAGCTTAATTCAGAGGATCTACCACCAACCGCTTCAACTTCTCGGCAGGATTATCCGACACGGTTGCAAGAGTGTGATCAAAGGTTAAAGGATTTAGAAAACCAAGCTGAGCTTCCTGACAAAGACAAAATATTCGATTATCAAAGTTGCGGTAAACCTTATTTTAAGGACACCAAAAATTCTACCCCACCCGATAACGCAGACACTATTACTATGCGAAATTTAGGAATGTTTGATTTCTCAATAATAACTTCTATGTATTGGACTAATAAGGACAAAGaacaatttgttaatttaattcatGAAATGTCACAGGAAATACGAGAAAAAGAAATTGAGTCAAAAATTTCAGAGTTACTACAAAAAGAGAAGATGGATTCTAGTATCAGTATTGAAAATGAAgttaaattgttaaaacaagaaataaaagcTATAAGGAAAAAACCTTTGAAAGATTTGGTTTTACCAATTACAGAAGAATATGACTGGGAATTTATTGTCAAGAAATTAAAAAGTAGGCATACAGCAGTAGAACATCAAAGATTATGGAAATTATTTCTGCACCCGAGTATTAATAAAGAACCATGGACTGATACAGAGCACAGTAATTTACAGAAACTTGCTTCtgattataaatatcaaaattggGATGAAATTGCTGAAAAACTTGGGACAAATCGTACGGGATATCAATGTTTTGTATTATACCGTACCCATTTGAACAATTCATTAACACATAAAAAATGGACCAAAAAAGAAGAGGAACGGTTAAAAAAGCTAATTCATGATTACCGCAAAGGTAATTACATCCCTTGGGGTAAAGTGGCAGCGTCAATGGAGAATCGAACAAAggttcaaatatataataaatacaatcaaCTTAGTGAAAAAAGAAAAGGGAGGTTTACAGCAAAGGAAGATGATGCTATACTTACATGTGTCGATGAATTTGGACAAGACTTCAAAAAGATGATGGAATATGTACCAGGTCGTTCATTATCACAATTACGTATACGATATAAAaccttaacaaaaaaaagaatatcAACAGTATGGAGTAAAGAAGAAGATTTgcagttaattaaattactagagAATCAAAAATCACCTGCATATTCAagtataacaaatttttttccTGGTAAAGACAGAGTGCATATAAAGAGCCGATACAACACTTTGGTTAAATGGATGAAAGCACATCCTAACCAGGATATATCTGAAGCACCTCGTCGACCTTCCCGTAGATTAGGACATAGAATTCCACCggataatataaacaaagccATTGATTTAGATGAATGTACTATTCCTACAGAATTAGATAAAAGCAATGTTTCTACAGATAAAGATAAGcctaatattgaaatatatgaaGATCAGCCTAATATTTCCACACTTTCAGATATACCTTCTGTTCCATCAGACTCTGTTGAACCTAGCATTCCTGTAAGTAAAGATAAATCTGATGTAATCGATTTGGATAAATCTAATATTGCATTTTATGTAGCTCAGCCAAATGTTTCGATAGATTTTGGCAATCCTAATATTGATGTATTTATCGCTCCGCCAAATGTTTTAAAAGGGATATTTACAGATCAGTGTAATATTCAAAGAAACTtagataaacataaaattacaatggatttaaataaactaaatgttGCTAAAGATTTAGATGAATCTGAGGATGCAATAGATTcatctaaattaaatattgcaaTATATGCAGATCCTTATGATACAATACATTTAGATGAGCCAAATTTTCTAAAAGATTTATCTGAACCTAATATTGAGTTATATATAGACCCACCAAATTCTCTGGCAGACTCCGATAACATTGACCTTCCAATAGAAGTAGCTAAACCTAATGTTACAATTAATTCAAATGAACTAAATTTTGAAACATACAAAGATAAACCTTTTAATTCAGCTGATGACCCTAATGTCATAATAGATTTAGATCAATCTAATGTTCCTTTATACATGGATAAGCCAAATGTTCCAACTCGTTaa
Protein Sequence
MSLTDFHIIDSDSSSENELQNSLRYNELNSEDLPPTASTSRQDYPTRLQECDQRLKDLENQAELPDKDKIFDYQSCGKPYFKDTKNSTPPDNADTITMRNLGMFDFSIITSMYWTNKDKEQFVNLIHEMSQEIREKEIESKISELLQKEKMDSSISIENEVKLLKQEIKAIRKKPLKDLVLPITEEYDWEFIVKKLKSRHTAVEHQRLWKLFLHPSINKEPWTDTEHSNLQKLASDYKYQNWDEIAEKLGTNRTGYQCFVLYRTHLNNSLTHKKWTKKEEERLKKLIHDYRKGNYIPWGKVAASMENRTKVQIYNKYNQLSEKRKGRFTAKEDDAILTCVDEFGQDFKKMMEYVPGRSLSQLRIRYKTLTKKRISTVWSKEEDLQLIKLLENQKSPAYSSITNFFPGKDRVHIKSRYNTLVKWMKAHPNQDISEAPRRPSRRLGHRIPPDNINKAIDLDECTIPTELDKSNVSTDKDKPNIEIYEDQPNISTLSDIPSVPSDSVEPSIPVSKDKSDVIDLDKSNIAFYVAQPNVSIDFGNPNIDVFIAPPNVLKGIFTDQCNIQRNLDKHKITMDLNKLNVAKDLDESEDAIDSSKLNIAIYADPYDTIHLDEPNFLKDLSEPNIELYIDPPNSLADSDNIDLPIEVAKPNVTINSNELNFETYKDKPFNSADDPNVIIDLDQSNVPLYMDKPNVPTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-