Basic Information

Gene Symbol
kn
Assembly
GCA_033220335.2
Location
CM067279.1:4375664-4392133[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-45 7.2e-41 140.8 0.4 182 250 26 96 21 101 0.93
2 2 2.4e-32 3.3e-28 99.0 0.1 335 387 102 154 100 159 0.96

Sequence Information

Coding Sequence
ATGATCCTAATAGTAGGAACCGAACAGTTCACCCTGGAAAAAAACTACAAGTGTTTCCTACAAATTTCTTTGTGGTCATTTTTTCTTAAGTTCTTCTTAAAATGCAATCAAAATTGTTTGAAAAACGCTGGTAATCCGCGGGATATGAGAAGATTTCAAGTGGTTATATCGACGCAAGTGATGGTGGACGGGCCGCTGCTCGCGATATCCGACAACATGTTCGTCCACAACAACAGCAAGCACGGGCGGCGCGCTAAGCGCCTGGACCCGTCTGAAGGTATTGACGCCGCGCCAGACAACAATTCAGCTCTCAACGAGCCCACCATAGACTACGGCTTTCAAAGACTACAAAAACTTATACCTAGGCATCCCGGCGACCCTGAAAAATTACCAAAGGAAATAATTCTGAAACGCGCTGCGGACTTGGCCGAGGCCTTGTACTCGATGCCGCGCAACAATCAGCTTCTGCCCCGTTCACCACCACCATCCGCATCCTTCAACACCTACGGGCAAGATGCTGCGCCCCATCAGTGGACTGAAGGAATGAGTGGTCTGGTTTCCTCACCGTTCAGCGTGAACCCGTTCTCGTTGCCGACCTGCAGCGCCCAGCAGTACGCGCAGACAGCGCCGCTCGCTTCCAAGTAA
Protein Sequence
MILIVGTEQFTLEKNYKCFLQISLWSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPDNNSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSASFNTYGQDAAPHQWTEGMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00957691;
90% Identity
iTF_00957691;
80% Identity
iTF_01494050;