Basic Information

Gene Symbol
-
Assembly
GCA_033220335.2
Location
CM067297.1:3905643-3913006[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-12 4.9e-09 37.1 0.0 2 89 223 294 222 294 0.91

Sequence Information

Coding Sequence
ATGGATGAGGTGCTCGCGATCAACGACAAGGTGGTGGTCCGGGCGGAGGACCTGCTCAGTTGGGTGTGCGAGGGCGCCGGCTGGCGGTGGGGGCTGCGCGCGGTGTGGCGGGGGGCGTGCGCGCCTCCCGCGGACCCCCGCACAACCGCGCCCCTGCACCACACCAAACTCGACTTCAGCGACGTGGAGAGGGAGAAGAATGCCATAACGGTGGACGCGGACAGTGCGGGCGTGATGGTGTTCTCGTACCCGAGGTACTGCAGGTACAGGGCGCTGCTGTCCCGGCTCGAGGGCATCCAGGCGGACTGGCTGCGGGACTCGCTGGTGGCCGCGTTGGGCGGATACGCGGCTCCAACGAAGAACACCAGGATCCTTTATTGCAAAGAGACGTTCGAGTACCCGGAGCTTGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGGCCGCGCGGTAGGCGGCGCCGGCAGCGCTCGCGATCCGTCTCGCGCTCCGACAGCGAGGAGCCGCAGCCCTACGACCCGCCGATACGCGGGCCCCTGCCGCCGCCCGGGGAGCAGACGCTGCGCCGCCTGTCCTTGAGGAACGGGGCTCCGAAGAGTCCGCAGAGCGAGGAGGAGCCGGACGAGAGGTCGGAGGGTGAGAGCAAGGAGGAGCGCGACTTCCTGCAGGAGCTGAGGCAGTTCTACCGCGCGAGGAACGAGAGCTTCAAGACGCTCAAGCACTtgtcgcTGCGCGCGCTGTACGCGGGCGTCGCGTCGCGCGGCGGCTACGAGGCGGTCTGCCGCGCGCGGCTGTGGCGCGCGCTCAGCCCGGAGcggccggcgcgcgcgcgcagGCACTACGAGAGATTCCTACTGCCGTTCGAGAACCACGAGAGGAAAAACGGCTCGAGGCTATTCCACAAGATCGCCAACGGCCGCCTCGAGGAGCCGAAGACGATCGACACCATCGAGGTGCACGACTCGCCGCTACGCGAGGTGGAGACCAGCGCGGAGCTGCCCGACAAGAGGCTCAGGACGCcgtcgccgcgcgccgccgccgcgggaGACGCGCGCGTGCGCCTGGACAACGAGACGGGCGAGGTCATCAAGGCCGACGAACCGGACGTCACTTCCAAACCGGCCGAGGAACTGAACAGGGAGTTCCTGGACTCTCTGTCTAAGGAGGAGAAGCCTCTGAAGATCACGTTGAAGCCCGTGGAGAAGTTGCTCGATGGCCAGCTGATGGGGAAGATGACGGGGGATGTCGACGGCGGCGGGACGGGGCCCGGCTTTCATCTGAACGAGCTGACGCAGAAGCTAAGCTTGGCGAGCGCTGATGCGGCACTCCTGCACCAACTGGCTGCGGGCGAGAGGAGGACGCTGAACGGGCACTTCGCGCCTGCCCTCGCCGCGCACCACGCGCCGCAACCCTCTCCCGCCGACCAGCGGGGCTCGCGGCCGGCGGGGCGGAGCTCCTTGCGCGCTGTGCGGGTGAAGCCCACGAGACCCCTCGCAGCCGCCGCGGCCACGCCCCCGGTACCGCCGCCACCGCTGAGGCCGGACTCCGCCTCGTGCTCCCCGCAGCCGGGCTCGCTGAACAACTTCGGCATCCACCACCCGCCGCCCGCGGCACCCGGCGCCCCGTCAGCGCAGCCGAGCGCAGCACCGGCCGCATCCGCCGCGCACAGCGACGACGAGATAGTAGAGGTGCCGTATAAACCAAAAACGCCAGAGATAATAGACTTGGACGAGTATCCGGAGAGCCCGCAGTCGGTCAAGAAAAAGAAGCTCGACATTTTGAAGGAGCGCGGGCTGGAGGTGACCGCGGTGCCGCCGGCCTGGGCCGCGCCGACGACCCTCGGCGCGCCGCTCCCCGCGCCGCTCGCGGCGACCCTCGCCGGCCCGCTCATCGGCCCGCCGCCCATCATCCTCAGCCCGGCCGTGCAGCACCAGATCATGACGCAAGCGCAGCTCCTGCACATGTACAACATAATACCTCCGAGCGTGCCCAACGGCGTCCGCCCGCCTAAGGTCATCCAGGCGACCAGCATCTACGGCACCACCGGCCCCGAGAAGACGGTGTACGGCAATCCGAAGGACCCGTTCATGCCGCCGCCGCACGTACTGCGCGGCGCACCGGTGCGCTGGGCCCGCGGCTTGGGGGCTTTGCCCTCCGCCGCGTCCCCGTCAGCGTCAGCGCCGCAGCTCGCGCGCGACCCGCTCGACCTCACCTGCCGGCCCGCCGTCGAGATCATGCGCGTCCCAGCAGCAGCGCCGGCGTCGCAGCCCGCCACCACGGCCACCACGACCACCTCAGCAGCCAACAGTTACACGCTACTGGACGGCAAGGCGCTGGTCGGCTCCAACCTGGAGATCACGCTGGTCGGCCCCAAGCACACGCCGCCCAAGCGGCCGCCGCAGAAGCGCTCCTCCAACGGCAAGTTCGTCTCCAGCAAGACGCCGACGCCGCCGCGGCCGCAGCTCGCGCAGCCGCAGCCCGCCAAGAGCCCGCTGGTGGTGCCCAACTACCAGCTCAGCCAGGAGGTGGCGCCGCTGGTGGACCCCGCGTACGTGAGCGCCTTCTGCGGCGGCCTCGGGCGCATGGACCAGCGGCAGCTCGCCGCGTACCGGGACCTCGTCGCGAACCAGTTCCGCGGGTACAGCGGCCTGCTCAACATCGGCACGCCGACCACCAAGAATTAA
Protein Sequence
MDEVLAINDKVVVRAEDLLSWVCEGAGWRWGLRAVWRGACAPPADPRTTAPLHHTKLDFSDVEREKNAITVDADSAGVMVFSYPRYCRYRALLSRLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRQRSRSVSRSDSEEPQPYDPPIRGPLPPPGEQTLRRLSLRNGAPKSPQSEEEPDERSEGESKEERDFLQELRQFYRARNESFKTLKHLSLRALYAGVASRGGYEAVCRARLWRALSPERPARARRHYERFLLPFENHERKNGSRLFHKIANGRLEEPKTIDTIEVHDSPLREVETSAELPDKRLRTPSPRAAAAGDARVRLDNETGEVIKADEPDVTSKPAEELNREFLDSLSKEEKPLKITLKPVEKLLDGQLMGKMTGDVDGGGTGPGFHLNELTQKLSLASADAALLHQLAAGERRTLNGHFAPALAAHHAPQPSPADQRGSRPAGRSSLRAVRVKPTRPLAAAAATPPVPPPPLRPDSASCSPQPGSLNNFGIHHPPPAAPGAPSAQPSAAPAASAAHSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAVPPAWAAPTTLGAPLPAPLAATLAGPLIGPPPIILSPAVQHQIMTQAQLLHMYNIIPPSVPNGVRPPKVIQATSIYGTTGPEKTVYGNPKDPFMPPPHVLRGAPVRWARGLGALPSAASPSASAPQLARDPLDLTCRPAVEIMRVPAAAPASQPATTATTTTSAANSYTLLDGKALVGSNLEITLVGPKHTPPKRPPQKRSSNGKFVSSKTPTPPRPQLAQPQPAKSPLVVPNYQLSQEVAPLVDPAYVSAFCGGLGRMDQRQLAAYRDLVANQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00249502;
80% Identity
-