Basic Information

Gene Symbol
Arid4b
Assembly
GCA_033220335.2
Location
CM067285.1:4522238-4552614[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-29 3.6e-26 92.0 0.1 1 89 279 365 279 365 0.96

Sequence Information

Coding Sequence
ATGcaGGGTGATGATCCGCCGTTTTTGCCCGTCGGGACTGATGTCAGTGCTAAATATAAGGGGGCATTCTGTGAAGCCAAAATCAAGAAAGTGGttcgtaatataaaatgcaAGGTAACATTAAAAGCTGGTGGTATCACCACTGTCAATGATGACGTAATCAAAGGCACCTTACGTGTCGGTAGTACAGTTGAAGTTAAACAAGACCCTAAAAAGGATGCAATGGAAGCTGTTATTACCAAAATACAAGACTGTAGCCAGTACACTGTTGtttttgatgatggtgatataacAACCTTACGGAGATCAGCTTTATGCCTTAAGAGTGGACGTCATTTTAATGAAAGTGAGACTTTAGATCAGTTACCACTTACACATCCAGAGCATTTCTCTACACCAGTGATTGCTGGTAGACGAGGCAGGAGAGGACGAGCACAatCGGAAGAAAGTGAAGGTGAAGGAGTGACGCGTCGTGTAAAAGCAGATAGCGAGCCCCATGTAGGGCGTGTGGTTTTGGTGGAAGCTAGCAGTGGCGCTGAGCGCCGTCGCCCCCATCAACCCGCCTTCCCTGCGCTTGTTGTTGCACCTACTGCTCAGATCAAGGTCAAGGAAGATTATCTCGTGAGATCCTTCAAGGATGGCCGCTACTATACAGTGCCAAAAAAAGAAGCACGCGAATTTCGAAAAGGCAGTGCACCTTTGGAATGGGCTGGTGTCGAAGCTGCTCTGCAGTATCTCAACAATGCTGTGTTGCCTCCGCATTGGGACCGTGACACGCTCTTTAATGAACCAAGGAACACCTCTGATGATaGTTCTGATGATGAACCACGTGAAGAGAAAGATCACTTTGTGGCACAGTTATACAAGTTTATGGACGACCGTGGTACCCCTCTTAACAGGAACCCCACAATTGCTAATCGAGATATCGATCTATATAGACTATTTCGCGTTGTTCGAAAATTGGGAGGCTACAATCGTGTAACAAACCAAAACCAATGGAAGACAATTGCCGACAAAATGGGCTTCCATCCAGTAACCACGAACATAACAAACCTTTGTAAACAAGCATACAAAAAATTTCTGCACAGCTTTGAGGACTTCTATCGGAAGCTAGGCGTGACGCTGGTAGCACATCCGAGGGGCGCGCGTACGCCGCCTGCCGGCCGCTCACTGATACGCGACCGCGACAAACAACCGCCCACCTCCTCCTCCGCCTCATCCACACCCACCGGAACACCTGCACAGcgTGGCAAAGAAAAGGAATCGGACAAAAGTGAAACAGACAAAAGCGATAAGAGCGAAAAAGATGACAAAGTGGAGAAAATAGAAAAACCAAAAGAAAGGGTGGGCGCCAGCGACGAGGAAGATAGTGCCGATAATCAACCACTTATAGTTACCACGCCGAAgaTTGAAAAAGAGAAAGAGATTGAAAAAGACAAAGAAAAGGAAAAGGACAAAGAAAAAGAGATGGAAAAAGACAAAGGCCCATCAAGTAGCACTAGCGATGATAAGAGTGTGGTAAAGCCTCGCTCACAGTCGAAAACTCGAAGCCTCTCCGTCGTTAAGACAGAACCGCACGAGAAGAGGGCGCCTAAGAGAAGACCATTCTTATCAAAAATGGGCGAGGGCACGAGTACGGGAGCACCGCGAGCGTCGCGCAGGCCGCACGCCTCTACTGACAGTGACAGTTCAGGACGGGCCTCCAGcagGTGcggccccacaaaaaaaatgcAAAGTCGTCGCAGCCAGAGCGCAAATTCAGCAAGCAGTGGCAACACCATAGCTTCAAACAGTTGCAAGAGACCTCGTAAAAGAAAGAGTACTGAACCATCCACGAGTGGTGAGTCTTCACGTTCCGGGAGAGCTAATCCGAAGGCGGTGGTTGGCGATAAATTGAAAGTTTACTATGAACCTACACAGTTTGAATCAAAGGTAACATATGAGGCGAAGGTTATTGATGTAACCAATACGGGCATGTTCCGCGTACACTACACAGGCTGGAATACGCGCTACGACGAGTGGATTAAGCCGCACCGCATCGCTCTTAATTTAACCCAGCACGATGCACGCAATAAAAAAAACACTAGTCTAAGCCGGCGGGCAAGAACCAAAAGGACAGAAGAATCATCGGCGCGATCTGACTCTGATAGCGATACGGATAGCGATGACGATATTAAACCTTCAATCAAAAAAATTGATGATAAAACAAACATAGTTAaaaTTACACCCAGGCCCAAAGATACAAAATCTAGTGACAGCAGCAGTTCAAGCAAGCCTCGTAAGAGGCCTGCAAGAGCAATCTCAACACCTTCGACTGTGTCTCCTGCTAAAAAATCTCGAATTAATGTAACTGGCCATCAGCATCAAGGAAGAGACTTTGATCTTAACGAAATTCGATCTGAGCTAAAAGGGCTACATACTGTAAAACAGGAGCCGGAAGAAGTAATCAAAAAAGAAActcaaaaagataaaaatacaaGTCCCATTCAAATGTCTGCTCAAACTCTTGGACCACCACAACCCGAAAAACAACCCGAAGATGTATATGAGTTCAAAGAACCAGAACCATTCGAACTCGAACTTCACGATGAGAAAAAGAAACGTACGCATCGTATATTCGATGACATTTCACCAAGCAAGTATACTTCAACATTATCAAAATCTTTAAGTGAAGAGATATCTGAAGATCCTCTACGACCGAGACCTTCCTCAATAAGGTCTCCATCTCTTTCCCCTTTCAGGGATTTTAGTGCGACCAGAGATATACCGGGTCGACAGAGTCCTGAGGAAGATTCTAAAGATGGTCTCTTCTCGCTTGATGATGATTCATGCCCTGGTGAGGGTAGTTCAGGTCCTATTTTCGAAGGATTTACTCCAGCTAAGAACCAAGAAACGTATTCTAAAAAGAGTAAAGTCAATAAGTTAAGAGAGTTAATAGATGATTCTCCAGATAGCCCAGCTGATGATGAGCAGTCTTCGGAGGAAGAAAATGAGGAAATAAAGGAAGAAAGTGAACCAAGTTTTGAGGTACCAATTCTTCAGATAACGGAAGTAGTTGAACAACCAATCAAAGAAGAAATCCAAGATGTTGAACCAGATAAAGAAATAGTTATTGTTCTTACTGAGCAACAAATTTTAGACATTCCTATACCATCTAAAACCCcaccatttaaaattaaattggaATCTCCAGATTCAAATCAAATAGAAGTTACTCCTGCAAAACCTTCGGCTACAGCTACTAACGAAGTGACtgaagaaacaaataaaataatcccCATTATTAAAGAAGAACAAATTCAATTGCTCTCTATTCCATTGCCAGCCAATGAACCTAAAGAAAaggaaatattgaaattaaaaattgataaattagACCCAGAGCCAGTAATAGTGAAGTTAGAGCTACCATCTAGTCCTCTTATAGATACAGAAGAAGATAAATCGGAACCTGACAGTCCAGCACGCATTGACGTTCTTCCGGAACCGCCCCCTGGTTTTCTACTGCAATCTGAGGGACCTAAAATTGCTGAAAAGCTTCTTAAAGCTATAAATAGCGCTAAAAGATTATCGATGTCTCCTCCTCCAATAGAACCGACTGATAGACCTTTAACACCAAACAAAAGTATTCTAATGTCCAAAGAAGACAACAAACCGTCACCTATATCTCCTGAAATTAAACATCTTAGCAAACCAGAACCTCTAAAACCAATAACTAAGATCGAGCCAATAAAGAAGATTAGTCCGCTTCCTATAACGGATTCTATTTTTGGAGAGCCTTCAAATTTTACTGATTTAAATCTGAgtgatttaaagaaaattaagagCAAAGAACCCACCCCGCCACGGTTGCAAAGTCCCCTAAACATATTGGAGAGACGTAAGAGTGTCGCGGAACTGCCTCTTAGCGCGCCCGGCAAGAATAACAAAGTTCTCAGTGATACTATTCAAAAACTTTCCAGTCAGATTAATCAATCCGCCGCCAACATTCCTCTGCCACCGTTTCCACCTGGAGACAGAAGTGAAACGAGTGACTCCGATGATTCAGATAGAAGGTTAATTATAGATAAAGTGTCGATGGACGAATGGGGCAACAGTGGCAGCTGTGAAGTTTCGGGTGCGCGGGCACTGCACGCGGGAAAATCGCCCGGCGAATGGAGCGCTGGCGAATCACTGCTTATGCTTGAAGACGCCTGCAAGAACGAGAGGAAGCACAGTGCGAGCGTAGTGGTAGCGGGCAGCGGACGGCCAATTGCTAGTACTGGGACAACTGCAGCAGTTGCTGGTGCAGTAGGTACAGAGGAGGACAGCAATATATCTTTGTTGTTGTGTGAGGAGACAATCCCCGGCTCGCCTGCGCCCGACGCCGAGCCTGCGCCACCGCGACACAAACACACTTTACCATTCGCCTGCGCGCCTCCACACCACTCTCATTCCAAagTGGAAGAGCGTAATAACGCGAGCGGATCTCGGGAAGCCGGCGCTGCTGGCGTGGCCGCGGCGGCCGGAGTAGCGATGGAGGCAGTGGGCGCGGCTCCAGCTGGCTGGGCGCGGCGGCATGCGCTCCTCGACAATACACCGCCCACCACGCCCGATAGTAGCCTTGACATGTCACCGCATCGAGAGCGCCGAATATCGGAACGCGATAGTCCATCAGAACGGAAGGAAGAAGATGATGATGCCCACGGCCACGGCTCACCTGCTCACATGGACTTGGAAAAACCACGCcCGAGCCGCTCCCGCAAAGCATCAGAGAGCTCAGCCGCCGGGCGAGGGCGTACGCGGCGCTCGCGTCGCGACACGGACgaacacgcgcacgcgcactcccaTCCGCACTTGCTCCCCGTACACAACGTGCATGCACATCAGCCCTCTCTTAAGTGCAACTTTACCGTTGAATTGGATCCGTCTTGGGATGGTCAGAAGCGTATCAACGTGCTGACGTCGCGGCTGGCGGACCTACGCAAAATGTACCACTCAGTGAAAGCTGAAGTGGTCGCTATTGAACGGCGTAAGAAGAAGTTGCGGCGGAAGGAACGCGAGGCTGTGAAGGCGGCGAAAGCAGCGTGTGCTTGA
Protein Sequence
MQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESEGEGVTRRVKADSEPHVGRVVLVEASSGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNNAVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVRKLGGYNRVTNQNQWKTIADKMGFHPVTTNITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSASSTPTGTPAQRGKEKESDKSETDKSDKSEKDDKVEKIEKPKERVGASDEEDSADNQPLIVTTPKIEKEKEIEKDKEKEKDKEKEMEKDKGPSSSTSDDKSVVKPRSQSKTRSLSVVKTEPHEKRAPKRRPFLSKMGEGTSTGAPRASRRPHASTDSDSSGRASSRCGPTKKMQSRRSQSANSASSGNTIASNSCKRPRKRKSTEPSTSGESSRSGRANPKAVVGDKLKVYYEPTQFESKVTYEAKVIDVTNTGMFRVHYTGWNTRYDEWIKPHRIALNLTQHDARNKKNTSLSRRARTKRTEESSARSDSDSDTDSDDDIKPSIKKIDDKTNIVKITPRPKDTKSSDSSSSSKPRKRPARAISTPSTVSPAKKSRINVTGHQHQGRDFDLNEIRSELKGLHTVKQEPEEVIKKETQKDKNTSPIQMSAQTLGPPQPEKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSSIRSPSLSPFRDFSATRDIPGRQSPEEDSKDGLFSLDDDSCPGEGSSGPIFEGFTPAKNQETYSKKSKVNKLRELIDDSPDSPADDEQSSEEENEEIKEESEPSFEVPILQITEVVEQPIKEEIQDVEPDKEIVIVLTEQQILDIPIPSKTPPFKIKLESPDSNQIEVTPAKPSATATNEVTEETNKIIPIIKEEQIQLLSIPLPANEPKEKEILKLKIDKLDPEPVIVKLELPSSPLIDTEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPIEPTDRPLTPNKSILMSKEDNKPSPISPEIKHLSKPEPLKPITKIEPIKKISPLPITDSIFGEPSNFTDLNLSDLKKIKSKEPTPPRLQSPLNILERRKSVAELPLSAPGKNNKVLSDTIQKLSSQINQSAANIPLPPFPPGDRSETSDSDDSDRRLIIDKVSMDEWGNSGSCEVSGARALHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRPIASTGTTAAVAGAVGTEEDSNISLLLCEETIPGSPAPDAEPAPPRHKHTLPFACAPPHHSHSKVEERNNASGSREAGAAGVAAAAGVAMEAVGAAPAGWARRHALLDNTPPTTPDSSLDMSPHRERRISERDSPSERKEEDDDAHGHGSPAHMDLEKPRPSRSRKASESSAAGRGRTRRSRRDTDEHAHAHSHPHLLPVHNVHAHQPSLKCNFTVELDPSWDGQKRINVLTSRLADLRKMYHSVKAEVVAIERRKKKLRRKEREAVKAAKAACA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00197154;
90% Identity
iTF_01115494;
80% Identity
-