Basic Information

Insect: Trissolcus japonicus
Gene Symbol: -
Assembly: GCA_030522925.1
Location: JAPYZS010000010.1:43559-46433[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0011 0.13 13.4 3.4 1 23 243 265 243 265 0.99

2 7 0.00019 0.02 15.9 4.9 2 23 398 419 397 419 0.97

3 7 6.3e-06 0.00069 20.5 0.8 1 23 425 447 425 447 0.98

4 7 8.6e-06 0.00095 20.1 1.9 1 23 453 476 453 476 0.93

5 7 7.8e-08 8.6e-06 26.5 0.7 1 23 482 504 482 504 0.99

6 7 2.1e-06 0.00023 22.0 1.7 1 23 510 532 510 532 0.96

7 7 3.3e-06 0.00037 21.4 2.5 1 23 538 560 538 560 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0011	0.13	13.4	3.4	1	23	243	265	243	265	0.99
2	7	0.00019	0.02	15.9	4.9	2	23	398	419	397	419	0.97
3	7	6.3e-06	0.00069	20.5	0.8	1	23	425	447	425	447	0.98
4	7	8.6e-06	0.00095	20.1	1.9	1	23	453	476	453	476	0.93
5	7	7.8e-08	8.6e-06	26.5	0.7	1	23	482	504	482	504	0.99
6	7	2.1e-06	0.00023	22.0	1.7	1	23	510	532	510	532	0.96
7	7	3.3e-06	0.00037	21.4	2.5	1	23	538	560	538	560	0.97

Sequence Information

Coding Sequence: ATGGAAGTTGGGACTGAAGAAGAAACTCAGACTGTTCTTTTGGAAGGGATGGAGGGAACTCAGTACATCATTCAGAGGCCTGACGGAGATATGGGTAAAGGTGCTTTTCTCACTCTTACCGGTGAGCTCATCTCCGAGGGAATGGTCGTTGACATGATGAGTGCAGGTGTTGGATCTGAATACAACACTACTGCACAATATTATGAGGGAGAAGACTTGCTCACACAAGATATGACTGAGGACGATCGAAGACTAGCAGACGCTCTGGTGGCAGTACACTTTCAGCAGCAGCAAAAGCAGCAGCTGCAAGCGCACGCTCATCACCAAGACACTCTGCAAAACGTAACACATCTCGAAAATCTGAACAGTGTGAATGCCTACTCGATTCAAACGATTCCTGATCCTGATCCGCCGCCAGTTTACCCGTCGATACAAACTTTCAAGCGTGCCTCGCAGAACGTCAAAGCCGAGTGCGTGAACGTTAAAAGCGAATACGAGGTGGAGGCGGCGTCGGCGGAAAACGCCGAGGAGTTTTCGCAAAACGGTCCCAAGAGAACGCTTCCTCATAAGAAGAGGAAAAATTGGGAGGAAAGAAAACATCCGCGCAAAGTCAAGCAGGTGAAAAAGAGCACTTCGAGAAACAAGGACATCGCTAGACTGCAAGAAAATGTTGTGAGTGAGGCTGTGGCGAAGATGCAGGCGGTCAAGGAAGCTCTGGCGCCTGCTTTTAAATGTGaactttgtaataataaatttaccaCGCAACTCACTTTCTTCGAACATTTGAAGACACACTATGAACCATTTAAAGAGGAGAGAATAATTACCCAGCAGACGAGCGCTGGGACAACTATAAGTATTAATTTAACAGAACAAAGTGGTAGACAAAATGTTGCGCAGGATGTACAGGAGATTGAGGAGTTTAGTGAACCGGAAGATTTGATGGAAGGAATCAGGGGTGTTGTTGAAGAGACGGAGGCCCACATAGACGACGAGACGCAAAATCCTATAACAACTTCAACGGATGAATCGAATATTTGGACTTTATCAAGCAACAGTGAACAAAATAACCCGAAACATTCCGAACCAGTGTCCACAGTTAGCAAAGAAGatttacaaaacaatgaaaccaGCGAACCTGCCACCActgtaaagaaaaagaagagtcGTTCGAAAACAGTGGAAAATCTAGTATGTCAGCAGTGCGATCGAACATTCCATCACAAAAACAGCTTGGTGTACCACATGCGATCGCACAGTGGTGAAAGGCCACACCAGTGCGAGATATGTGGTAAAAGTTTCTTTGCTGCAAGCGCGTTGAAGgTTCACAAGCGTTTGCACAGCGGGGACAAGCCGTACAAATGTGAGGAGTGTGGTCGACACTTTCGTCAGTGGGGCGATCTGAAATACCACTCGACAAGTCTTCATTCGGAACAGAAACAGTTCCAGTGCGAGTACTGCGGCAAAGATTTTGCTCGCAAATACTCTCTCATTGTTCACCGACGTATCCATACCGGCGAGAAGAATTATCTCTGCGAATACTGCAACAAAACGTTCCGTGCGAGCAGCTACTTGCAGAACCACCGGCGGATACACACAGGCGAGAAGCCCCATCCCTGTGACATTTGTGGCAAACCGTTCCGAGTGCGCAGCGACATGAAGAGGCATTTGCACACGCACACACGTAGTCGTAATGAGCGACCGGCCAGTCGCAGCCTCGTCCCTAAGAACACAGAGAGCGACGCACAAAAAGCTGCCAATAACAAGGCAAGGACCATCCAGGACCTTGTCCACGAACTGAAACTCGAAGTCGAGCCGAATGGGGCTGTGGAAATCGTCGCGGGGCCTCAAACACCGGAAAGCATTTTACCTCACGAGGGCTCGCAGACGCTCGAATACGAGGTGACGAATGCCAACGACAGCAGCAATGAAAAGGACCCGCTCGAATCGGTTGTCAGAACTGCCGACGAAATgccatactttttcatataa
Protein Sequence: MEVGTEEETQTVLLEGMEGTQYIIQRPDGDMGKGAFLTLTGELISEGMVVDMMSAGVGSEYNTTAQYYEGEDLLTQDMTEDDRRLADALVAVHFQQQQKQQLQAHAHHQDTLQNVTHLENLNSVNAYSIQTIPDPDPPPVYPSIQTFKRASQNVKAECVNVKSEYEVEAASAENAEEFSQNGPKRTLPHKKRKNWEERKHPRKVKQVKKSTSRNKDIARLQENVVSEAVAKMQAVKEALAPAFKCELCNNKFTTQLTFFEHLKTHYEPFKEERIITQQTSAGTTISINLTEQSGRQNVAQDVQEIEEFSEPEDLMEGIRGVVEETEAHIDDETQNPITTSTDESNIWTLSSNSEQNNPKHSEPVSTVSKEDLQNNETSEPATTVKKKKSRSKTVENLVCQQCDRTFHHKNSLVYHMRSHSGERPHQCEICGKSFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHSTSLHSEQKQFQCEYCGKDFARKYSLIVHRRIHTGEKNYLCEYCNKTFRASSYLQNHRRIHTGEKPHPCDICGKPFRVRSDMKRHLHTHTRSRNERPASRSLVPKNTESDAQKAANNKARTIQDLVHELKLEVEPNGAVEIVAGPQTPESILPHEGSQTLEYEVTNANDSSNEKDPLESVVRTADEMPYFFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493100;
90% Identity: iTF_01493100;
80% Identity: -