Basic Information

Gene Symbol
ZFX
Assembly
GCA_030522925.1
Location
JAPYZS010000399.1:32497-37561[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.3 1.5e+02 3.8 0.1 3 23 11 31 10 31 0.94
2 15 0.29 31 5.9 3.1 1 23 855 878 855 878 0.95
3 15 0.00032 0.035 15.1 1.1 2 23 959 981 958 981 0.96
4 15 0.0066 0.72 11.0 0.2 2 23 994 1015 993 1015 0.97
5 15 1.9e-05 0.0021 19.0 2.3 2 23 1018 1039 1017 1039 0.97
6 15 0.0051 0.56 11.4 0.5 1 23 1045 1067 1045 1067 0.96
7 15 2.6e-05 0.0029 18.6 4.5 2 23 1074 1095 1073 1096 0.95
8 15 0.12 13 7.1 3.7 5 23 1109 1127 1108 1127 0.97
9 15 1.9e-05 0.0021 19.0 1.5 3 23 1134 1155 1133 1155 0.97
10 15 0.011 1.2 10.3 0.3 2 23 1171 1191 1170 1191 0.97
11 15 7.2e-05 0.0079 17.2 0.7 1 20 1197 1216 1197 1219 0.92
12 15 8.9e-05 0.0098 16.9 2.7 1 23 1227 1249 1227 1249 0.99
13 15 0.0025 0.27 12.3 3.2 1 23 1255 1277 1255 1277 0.97
14 15 4.2e-05 0.0046 17.9 6.1 1 23 1283 1305 1283 1305 0.98
15 15 0.00046 0.05 14.7 7.0 1 23 1311 1333 1311 1334 0.96

Sequence Information

Coding Sequence
ATGGATCTCGCTACCGCAGGCGCCGTCGCCTGCCCGGTCTGCACGCTCTACCTTCGCGAGGGCATCAGTTTGCAGCGACATCTGGACACCCACCCCAAGGAACAGGTCATCGAGGCGCTCATTCGGGCCAGTTCCTCGGGTCAAGGTCAatccgccgccgccgccgccgccgtcGCGGCCGCAGCCCTACAAGCGCCGGTCGTGCCGGCCCCGGTGAGTCCTGGCGTCCCGACACCAACCACGGCACCGGCTCCTGCGCCCGCACAGGCCCAGCCGCAGTACCCGATGGGTCTGTTCGAGTGCCCGCCGATCATGCAGCCGCAGTTCGCGTCCTTCAGCTACCAGCAGTTCGTCAACAACGGCACCATGATGATCCCGCAGTACGCGATGGCCCCGCAGAACAACCAGATGATGCAGATGTTCTACAACCCCTATGGCATGTACCAGCACCAGCAGGTCCCGACTGTACAGATGATCTCGCCGATCACGCCCATGCCGGCGACGACCTCGATGACGACCATGTCCACGATGACCGCGAGATTCAGAGCCACCAGCAGCACCATCGAGGTGCCCCGGAGCATAGCTGCGCCTTCGATTGAGAGCTCGAGGGAACCCGAGCAGGCCGAGGAAAGTGCACTTGCCGAATCAACCTCCCCCGCGAGACCGGTTGCTAACGAGGAACCGGAACTGGAGGAAGAGCAGCGCAGCCATGAGAAGTCGGGGTCGGACGAACGGTTGAAGGACGCCGATGGGCTTTACATCGTTACGAATGGCCAGGCCGAGGGCGAGAGCATACTGCCGGAGATAACCGACGAGGAGATCGCAAGGTCAACGGGATTCAAGGAGCCGCGGTACTTTTATTCGAACGATTGTAATAATGAGAAAAGCGGCGAGGAGGTGCAGCAGCAGATCGAAGAGACGGTTGTGAGGATCGAGGACGAGGCGGAGTTGACGGTCGGTGTGAGCGAAGAAGTCAAAGATGCCAGGGAGAAAGAGGACGAGACAATGGAGGCTGTGGTACTGGAAAAGGAAGTGGAGACTAGTAAAACGAtagaggaggaggaggaggaacAGATTGGCACAGTTGAGCCGAGGGAGGAACAGGAGGAGCAGAATGAAGACGAGGTGATTGAGATGGAACCCGTGAAAGAGTCCGAGGAACCGTCCAGTTCTGTCTATAAGGAGGACGAGCAGCTGGAGCGTTTGCTCTCAAACATCATAGAGAACGAGCTTCAGCAGCGGCATAAGGCTAGCGAAGAACACGAAGACGTCGAGAACGATCATGAAGCCTCGGATGTGATTGCCAACGATCTGGAAGAGATGGCCCTCTCGACCAACGACCTCTCCCACAGCGATGACGCCGAAAGCCCTTATTTCCAGATCTACAACTACAGGAAGAGCCAGTCGGTCCCCTCGTCTCCGATCGCCCTTAAGAAGTTTCATCGCACGATCTCGCGTGTTTCATTGTGTTCAGATCTTGATTCTGTTGACAACCTTTGCGTTTACCCGGAGGATCTCGAGGGCAACGCCCTGCAGGAGTGCGTTGGGGAGGAGCGGTTCGACGATCTCAAAAACAACATGGACGTTTCCGACGAGTTCAGGGATCACTACGACGAGGCCGAAAACGATGCAGAGCTGGGGCAGCAACCGGAGCACGAGGAGGCCGTGCAGTCCACCGTGCTGGAGTCCAGCAAACCCTCCTCGCCCGTCTCTGTGCGGTCGTTTTGTAATGTTGAGATCGACAACAGCTCGAGAGACGTTGACGAGTTTGTCCAGGCCGACTTGTCAGCTGATAATGTTCCTATTGATTGCACGAAGCCTGATAAAGAGAAGGCCGACTTCCAAAAGTCGACCGAGAGCATAAACGAGGGCTACGTCGAGGACAAGGTCATCAACGAAGACGAGGCTGAGAACAGCTTCGCAGGCAGCTACCCGGTGATGGAGACCGAGTCGCCAGCTGTGTCTACTTCGTATCCGCTCAACGAGCTGGACAATTCACACAATCTGATGAACCTGTCGGAGAGTGTGGAACCGCTCACCAGCTCGGACTCCTCGAAGAGCTTCCACTGCAAGTCGCAGCTCCAAAAGCCGTCAGCGGAATTGCTCAATATCAGCGAGGATGCCCACGTGGGGCCTGTAAATGTTTTCGAATTCGATGGCCTGCAGATCCTCGTGCCGAGCACGTTCATCAGCGACTCCTCGCAGAAGGCCGTCAGTGGCACCAGTCAACAGTCCATGGCCAGCAGCGAGGGCGGAACAAACATCGACGAGGAGATTAAGAGCGTCAACATGAGGGCGGATGAGAGCATGCCGTCCAGGGGCGAACTTTCCGAACAGGAGAGCAACGGATGTACCGAACAATCGGCCTGGCAGCTTTATATGGGTCAAGAGTCGTCTCGTGTATCGACATCTTACGATCTCATGGCCCGAGAGAGCTGGGAGGAATCCGAGGGTTCGGACAACGAAGCCGGAGTTCCCCTGTTAGACAGCCGTTCCTTGGCGACACACTTTGCTTCAAGTTTGTTCCTCGACCGTGACCGTAAGACACCGACGCGTCGCACATTCAAGTGTTCACATTGCTCTGAGGTTTTCGAGTGCCCGAAGGAGCGTCGCGTGCACATTACCACAGCGCACAAAGAAGCGAGTTCGAGCGGGCGCAGTGGCAGTTCCTCCGAACAGCACGAGCTTAAGGATATCAAGATTCTGGACGGACGGACCAATGTGTTCGAGGACATCTTCACTCCAGGACTGCATGTGCAGCAGGCGTACCATCAGCAGCCGCTTCTACATCAGTTGCAACCGCCTCAGAGGTATAATGCACCGAAATCGGAGACTGATCAGAAGATAGACGGGATGGGTTCGGCGACCGAAGTGAGCTGCTCGGTTTGCAACCAGCGGTTCGTGAGCGAGAAGTCGCTGCAGATGCATCGTCGACGCATGCACGAGACCGCTGGCGTAAAACGCATCCGCGAGGTCTCCAAGTGCCAGATCTGCCAGGAGGAGTTTCCCTCGGTCGTTCTGTTCAATAGTCACCTGAAGATCCATCCCCTGGAATGCGGCCAGTGTGGTAAGTATTTTTACCGCAAACAGAACTTCAAGCTGCACATGAAGCGCCATCTGGGGATCAAGCCGTTCGCGTGCACGACCTGCGACAAAGCCTTCCTCACGAAGCAGAAGCTTGACGAGCACATGAACGGACACACTGGCAACGCTCCGGTCAAGTGTAACCTTTGCAACGAGACCTTCCGACGATACTCGAATCTCACCCAGCACAAGAATCGCCACCACCTGAACATCAAGAAGAAACTCAAGGATTACATCTGTCATTGCGGCGAGGTGTTCCATACCAAGAAGAAGCTCGCCTGGCACAAGGAGACCCACGACGAGAAGCCCAAGGCGTGCACCTACTGTAACGAGCGGTTCGTCCATATGGCCAGTCTCACTCGGCACATGAGACGCGCACACAACCGGCGGTTCGTACCTGACGCGCAACGCGAGGTCGAGAACGTCGAGTGCCCGATCTGTAAGTGCATCTACCTGCGCTCCTCGCTCGCGGTGCACATGCGCGTGCACAATGGCGAACGTCCGTACGAGTGTCAGGTCTGCTCCAAGGCCTTCAGCACCAAGTGGAACTTGCAGCTACACAAGTGGACGCACGCCGCGCGCAGCGCCAAGCCCTTCAAGTGCAACCAGTGCAGCGCCGCGTTCTACAGACACAGCGACTACACGGCCCACATGAACTCGCACCGCAACGTACGTCCGTATACGTGTAACTACTGCGGGGCGCAGTTCATACGCAAGTACAACTGTCTCAGGCACGTGAAGGAGCACGAGGAGAACAAGGCTCACACGTGCGAGATTTGTAAGAAGACGTTCCACAGGTCGTACTACCTGAAGGAACACTTACGAGTTCACTCCGGCGCCAGACCCTACTCTTGTCACATTTGCGGCAAAAGCAGCAGCACCAAATCAAATCACAACAAACACGTGAGAATCCATCATGCTAGAGAACCGGTTAACACTGAgaattaa
Protein Sequence
MDLATAGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIRASSSGQGQSAAAAAAVAAAALQAPVVPAPVSPGVPTPTTAPAPAPAQAQPQYPMGLFECPPIMQPQFASFSYQQFVNNGTMMIPQYAMAPQNNQMMQMFYNPYGMYQHQQVPTVQMISPITPMPATTSMTTMSTMTARFRATSSTIEVPRSIAAPSIESSREPEQAEESALAESTSPARPVANEEPELEEEQRSHEKSGSDERLKDADGLYIVTNGQAEGESILPEITDEEIARSTGFKEPRYFYSNDCNNEKSGEEVQQQIEETVVRIEDEAELTVGVSEEVKDAREKEDETMEAVVLEKEVETSKTIEEEEEEQIGTVEPREEQEEQNEDEVIEMEPVKESEEPSSSVYKEDEQLERLLSNIIENELQQRHKASEEHEDVENDHEASDVIANDLEEMALSTNDLSHSDDAESPYFQIYNYRKSQSVPSSPIALKKFHRTISRVSLCSDLDSVDNLCVYPEDLEGNALQECVGEERFDDLKNNMDVSDEFRDHYDEAENDAELGQQPEHEEAVQSTVLESSKPSSPVSVRSFCNVEIDNSSRDVDEFVQADLSADNVPIDCTKPDKEKADFQKSTESINEGYVEDKVINEDEAENSFAGSYPVMETESPAVSTSYPLNELDNSHNLMNLSESVEPLTSSDSSKSFHCKSQLQKPSAELLNISEDAHVGPVNVFEFDGLQILVPSTFISDSSQKAVSGTSQQSMASSEGGTNIDEEIKSVNMRADESMPSRGELSEQESNGCTEQSAWQLYMGQESSRVSTSYDLMARESWEESEGSDNEAGVPLLDSRSLATHFASSLFLDRDRKTPTRRTFKCSHCSEVFECPKERRVHITTAHKEASSSGRSGSSSEQHELKDIKILDGRTNVFEDIFTPGLHVQQAYHQQPLLHQLQPPQRYNAPKSETDQKIDGMGSATEVSCSVCNQRFVSEKSLQMHRRRMHETAGVKRIREVSKCQICQEEFPSVVLFNSHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFACTTCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFVHMASLTRHMRRAHNRRFVPDAQREVENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSAKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAHTCEICKKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01493070;
90% Identity
iTF_01493070;
80% Identity
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