Basic Information

Insect: Trissolcus japonicus
Gene Symbol: -
Assembly: GCA_030522925.1
Location: JAPYZS010000001.1:8381-10731[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.3 33 5.8 0.2 2 20 204 222 203 224 0.91

2 14 0.066 7.3 7.9 1.4 2 23 269 291 268 291 0.93

3 14 0.00019 0.021 15.9 0.0 1 23 297 319 297 319 0.97

4 14 1.9e-05 0.0021 19.0 3.3 1 23 325 347 325 347 0.95

5 14 4e-05 0.0044 18.0 2.0 1 23 356 378 356 378 0.98

6 14 1.4e-05 0.0015 19.5 4.5 1 23 384 406 384 406 0.98

7 14 2.7e-06 0.00029 21.7 1.2 1 23 411 433 411 433 0.99

8 14 0.0011 0.13 13.4 3.2 1 23 440 462 440 462 0.98

9 14 0.0023 0.25 12.5 1.5 2 23 482 503 481 503 0.97

10 14 0.0024 0.26 12.4 0.2 3 23 511 532 509 532 0.93

11 14 0.0086 0.94 10.7 2.6 3 23 540 560 538 560 0.96

12 14 0.0018 0.2 12.8 4.1 1 23 566 588 566 588 0.99

13 14 7.9e-07 8.6e-05 23.4 2.0 1 23 594 616 594 616 0.97

14 14 0.00084 0.092 13.8 0.3 1 21 622 642 622 643 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.3	33	5.8	0.2	2	20	204	222	203	224	0.91
2	14	0.066	7.3	7.9	1.4	2	23	269	291	268	291	0.93
3	14	0.00019	0.021	15.9	0.0	1	23	297	319	297	319	0.97
4	14	1.9e-05	0.0021	19.0	3.3	1	23	325	347	325	347	0.95
5	14	4e-05	0.0044	18.0	2.0	1	23	356	378	356	378	0.98
6	14	1.4e-05	0.0015	19.5	4.5	1	23	384	406	384	406	0.98
7	14	2.7e-06	0.00029	21.7	1.2	1	23	411	433	411	433	0.99
8	14	0.0011	0.13	13.4	3.2	1	23	440	462	440	462	0.98
9	14	0.0023	0.25	12.5	1.5	2	23	482	503	481	503	0.97
10	14	0.0024	0.26	12.4	0.2	3	23	511	532	509	532	0.93
11	14	0.0086	0.94	10.7	2.6	3	23	540	560	538	560	0.96
12	14	0.0018	0.2	12.8	4.1	1	23	566	588	566	588	0.99
13	14	7.9e-07	8.6e-05	23.4	2.0	1	23	594	616	594	616	0.97
14	14	0.00084	0.092	13.8	0.3	1	21	622	642	622	643	0.92

Sequence Information

Coding Sequence: ATGGCATACTGCAGTACAATCACAGAAATTGATCACTACCAACAGATAGTAACGAGACTGTCAAAATTGTGTCGAATATGCGGAGATCCGTTTCAGGATGGAGTCAATAtatttggaaacaaaagtGTGAATCAAGAAATCAAAGAGAAGATAGAAGTTCACATGCCCATCAAGATTGTCCCAGACGACATGATGCCGCAAAATTTGTGCATGGATTGTTACCAAAAATTGGAGGCCGTTCATAATTTGGTGGTCACTTGCTTGAAATCTGATATGAGATTTCGGCGGTATTTGAATTTGGATATGAATTCACATTACGATGCAAAGTTCAGCAAAATAGCAAACGGATGTTTAGAAGTTATGAAAGAGTTACCTTTGAGGAGAGATTACAACAGACTCGAATCTGTTTATCCTTCAACGACAGTCATATCAGGTTTAAATAAATCTACTGTTCCTGTAGGTACTAGCAGAAACGAGAGTTCAAACGAACCTCTTGATGAGACAGAGTTTCAGGATATATTGACTGATGCGTATTATAAGATAAAATGCGATGCTGTTCAAATGAGATCTGATGACAAAATGGTATCTGTCGAGGAAACCGAGTCGATCGTCTGCTTGAATTGTAGGGTCTCTTTCAAAAGTACAGAAACTTTTGAAGAGCATAAAATGTTATGCAAACCCGACGAGttgaacgaacaaaatttagaaacaGAGAAGTCATTGTGCAACACGCcagacaattttattgaagaaCAAGAATGtacgaacattttaaaaatgaaccaagaagtgcagaaaaaaataaggtgCGGGCATTGCAAAAAGGATTTTATGTCTaggaaaattttacaaatccaTCTGAATGCCACTCATGGTGGAACAAGTTTGTACATGTGCGGGATCTGTGAtaagatttacaaaaattgggCAGGGTTGGATGTTCACGAAGCAACTCATAGTACGGACAAACCGTTTCTGTGTGATCTTTGTGGCAAAAAGTTCAAACACTCGAATAATTTGAGGGGCCACAAACGAATCCATCTGGACGAgtcgaagaagaaaaaatatatctgtGATATTTGTCAGGCGAGATTTCGTTCGAGGTTTCATCTACAAGAGCATCTCAATAGtcacaacaaaaacaaaccctATTCCTGCGAACATTGTggcaaatcatttttcaagcgTGTGCAATTGCGACAACACAAATTAACTCACGGTTCAAAAAAGTATACTTGTTCAGTTTGCACGATGAGTTTTAATCGTCGGGGAAATATGATGGCGCATATGAAGAGGCATAATAAAGGAGATGCTGCGTACAAATGTGCAgTTTGTGAAACAAGATGTAAAACAATGAGCGAATTGAAGGTCCATCGAAAGCAACACACCGAGAAAGACATTGCCGATGTTATCAGAGAAAAGATGAACAATAAGCCCTTGCTGCAGTGCAAGGtgtgttcaaaaatgtttctcaaaCAGTCGTTGCTTTCTTATCATGAGCGCACCCACACACAAAGTAAATCCACAATCTGTGACGAGTGTGGTAAAGAATTAGCAAGTAGGCACACTTTAGCGGCTCACAAGAAGGCAGTACATTCGAATGACAAGTCCCATTTGTGCCAGCACTGCGGAAATTCTTTTGCCTCGAAGGAAGCCCGGCTGATACACGAAAGAACCCACACAGGAGAACGTCCTTACGAATGCGAGATCTGTCATGCGCGTTACAAGTGTTCCAGCAATTTGGGTCAGCATATGAAAACTCATGCGAAAAAGTGGCCTCACATTTGTTCCTATTGTGACAAGGGTTTCACTCGGAAGGGATCGTTGACGATCCACGAGCGGACTCACACTGGCGTCAAACCGTACAGCTGCATCAATTGCGACCAAGTGTTCGTCCAGAAAAATGACCTGACAAAACATCTGAAATCGCGCTGTAAAAAGTCACCCGATGCTGATGAATCCACGGGAAAAGGTCTGCAGGACAATCAAGTTGTGCATCTTCCTGTGATAAAACCACTTGTTCATAGTTACGTCGTTGTAcctcaaattttaaattcgtaCATGTTAAACATTGTACCACCTGATCAAATCACTGTTATACAGACATCGAACTGA
Protein Sequence: MAYCSTITEIDHYQQIVTRLSKLCRICGDPFQDGVNIFGNKSVNQEIKEKIEVHMPIKIVPDDMMPQNLCMDCYQKLEAVHNLVVTCLKSDMRFRRYLNLDMNSHYDAKFSKIANGCLEVMKELPLRRDYNRLESVYPSTTVISGLNKSTVPVGTSRNESSNEPLDETEFQDILTDAYYKIKCDAVQMRSDDKMVSVEETESIVCLNCRVSFKSTETFEEHKMLCKPDELNEQNLETEKSLCNTPDNFIEEQECTNILKMNQEVQKKIRCGHCKKDFMSRKILQIHLNATHGGTSLYMCGICDKIYKNWAGLDVHEATHSTDKPFLCDLCGKKFKHSNNLRGHKRIHLDESKKKKYICDICQARFRSRFHLQEHLNSHNKNKPYSCEHCGKSFFKRVQLRQHKLTHGSKKYTCSVCTMSFNRRGNMMAHMKRHNKGDAAYKCAVCETRCKTMSELKVHRKQHTEKDIADVIREKMNNKPLLQCKVCSKMFLKQSLLSYHERTHTQSKSTICDECGKELASRHTLAAHKKAVHSNDKSHLCQHCGNSFASKEARLIHERTHTGERPYECEICHARYKCSSNLGQHMKTHAKKWPHICSYCDKGFTRKGSLTIHERTHTGVKPYSCINCDQVFVQKNDLTKHLKSRCKKSPDADESTGKGLQDNQVVHLPVIKPLVHSYVVVPQILNSYMLNIVPPDQITVIQTSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -