Tjap003336.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- lola
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000094.1:160330-163555[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-08 0.00014 22.1 0.1 9 40 382 414 379 419 0.88
Sequence Information
- Coding Sequence
- ATGGAGGACGACCAGCAGTTTTGTCTGAGGTGGAACAACCATCAGACCACCCTGATACAGAACTTCGACACGTTATTAGAGTCTGGCACCCTTGTGGATTGCACGCTCGCGGCGGAGGGGAAATATCTAAAGGCCCACAAAGTAGTCCTCTCCGCGTGTAGTCCTTACTTTGAGGGCCTCCTCAGCGAACACTATGACAAACACCCCGTTTTCATACTCAAGGatgtaaaattcaaagaattaaAGGCCATGATGGACTACATGTACAGGGGGGAGGTGAATATCTCTCAAGACCAACTGGCAGCACTCCTTAAGGCCGCGGAGTCACTGCAAATAAAGGGCCTGTCGGAAAGCAGAGGCGGTAATGGCGGTCCGAAGTCCGACGTTAGGCAACCGAAAGTCAGCGCCCAATCGTCGGCACCGTCGTTAGACATTCCACACGCGTCTTCCGGTCTTACAATAGAAAAGAACAGCAAAGTTCCTAGGCAAAGTCTCACGCAATCCTCCGTCACTGACTTGCCCGAAGACTCGGCCAGTCCGCAAATCCCCAAAGGACTCTCATCCAgGGAAGGCTCTCAAAGTCCAACAACTAGGAGAAAAAAGCGAATCAGGAGAAGAAGCTTGGGCGATGACAACTCAATGGAAAACCACGAGGCGTCTAACTCAAGCGATATCAACCAACAGAGTGTGCCTGCGCTGGGTATTGCGCCCATCGCGGACGACAAACACACAGACCCCTCGGATTCGCTCGGCAGGTCGGCGCTCATGCAACAGCTGACGAAACCCGCCGACGAACTGCTACAACTGCCAATCGAAAAACCTGAGCCTACCGAAGAAATGATACAGCCAAAGTCAGAGTATTTGGAAGATCCGGAAGAAAGTGTGGAAGACCTTACGCTAGACGACGACATGAATGACCTCAATGAAATGGAACAAGATAGTAGTAGAGCGGGACCCAGTACTCACGATCCAAGTCAACATCCTGGTGGTGGGGGGGACGCGCGACGTCGGGGCCGCTGGTCCGCGGCGTCGACGCATTTCCTCGATTGCAACGAGGGCCCGGGCGTTGACGTGGCCGCGTTGCTTAAATCCCTGGCCAACAAGCAGGGTCGCAAGTACAGCTTAGAGTCCGTGCAGATGTCGCTCGAAGCGATACTCGTGCAGGGCCTGAGCACCACTCGCGTCTCAGAGATTTACGGCATTAATCGCTCCACACTGCAGTTCTACTTGAAAAAGCTCAACATTGTGCGCAGACGCGTGCGACCAAACAAGATCCAACCAATTTAA
- Protein Sequence
- MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESRGGNGGPKSDVRQPKVSAQSSAPSLDIPHASSGLTIEKNSKVPRQSLTQSSVTDLPEDSASPQIPKGLSSREGSQSPTTRRKKRIRRRSLGDDNSMENHEASNSSDINQQSVPALGIAPIADDKHTDPSDSLGRSALMQQLTKPADELLQLPIEKPEPTEEMIQPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDSSRAGPSTHDPSQHPGGGGDARRRGRWSAASTHFLDCNEGPGVDVAALLKSLANKQGRKYSLESVQMSLEAILVQGLSTTRVSEIYGINRSTLQFYLKKLNIVRRRVRPNKIQPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01492807; iTF_01493674; iTF_01492974;
- 90% Identity
- iTF_01492807; iTF_01493674; iTF_01492974;
- 80% Identity
- iTF_01493674;