Tjap010824.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- retn
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000759.1:23620-30009[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-21 2.2e-17 63.8 0.0 15 89 2 74 1 74 0.94
Sequence Information
- Coding Sequence
- ATGGAAGAAGGATCGCCAATCAATCGATTGCCAATAATGGCGAAGCAGGTTCTGGATCTCTACGAACTTTACAATCTCGTGATCGCTCGCGGTGGTTTGGTCGATGTCATAAATAAGAAGCTCTGGCAAGAAATCATAAAGGGTCTTCAGCTTCCATCTAGCATAACTTCTGCAGCATTTACCCTGCGCACTCAGTACATGAAATATTTGTACCCATACGAATGTGAAAAGGAGGGCTTATCAACGCCAACGGAGTTGCAGGCTGCGATAGATGGAAATCGAAGGGAGGGACGGCGCAGCAGTTATGGCCCGTACACGGGAGGCTCTGGTCCCGTCGAGACCATGATGACACAGCAGAGGGTTGTACAAAATCCCCTTCACTTGCATTCACAAATGTCACCGCTATCTTTGGTAACGGCCGCCGTAGCTGCCGGCCACCACAATGCCCAGGCTCTTGTCAATGGTGCCTCTTCGCATCCGCCTCTTCCCCAACTTGGACAGCATCCACAACATCCTCAGGGACTGCACGGACAACCCCCTAATGCTgggCTGGCTCCAGTCGAGTTTGATGCACGAGTAGCTGAATATGTGAAAATGCTGAAGGATTTTCGATCCGGCACTCCTGGAACTCCACCATCTCACGATATGTTGCACAGACAAAATAACACATCGCCAACGTCATCGTCGTCGCCGCGAGATGGAACACTCTCGATAACAGATTTCTCGCGGTTCAGCATGATGTACAGCATGTACAATAACAACAACGCACTGTACCCTGGAATAACTGGCCAACATCCCACATCGCCACAGAGGTCTCAATCGCCACTGCCAGCTGCAGCCAGTCCGGAACCACAACGCGAGGCTCTGGATCTTGGACTTAGatcatcACCAATGTCGACGTCACCTACAAGAAATGCGGCAGCATCGCCTGATGCACCCGCGGTTATCAAACGGGAACGAGAACCTGGCTCATCGCCTGGCGAGCCTGCTACTAAAAGGCCATACGTAGATGGAGATTATAATAAGACACCTGATGCACATATCAAAATAGCAAACAGAgGTGACAAAGGCAAGGGTGATAATTCGATCGTGGTCAGTATGGACATCAATGGCATTATGTATCAAGGAGTTCTCTTCGCACAAGACCGAAACTCAACGAGCGCAAACTCGACCGCTGCTCGAAATTCTTCGTGA
- Protein Sequence
- MEEGSPINRLPIMAKQVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLQLPSSITSAAFTLRTQYMKYLYPYECEKEGLSTPTELQAAIDGNRREGRRSSYGPYTGGSGPVETMMTQQRVVQNPLHLHSQMSPLSLVTAAVAAGHHNAQALVNGASSHPPLPQLGQHPQHPQGLHGQPPNAGLAPVEFDARVAEYVKMLKDFRSGTPGTPPSHDMLHRQNNTSPTSSSSPRDGTLSITDFSRFSMMYSMYNNNNALYPGITGQHPTSPQRSQSPLPAAASPEPQREALDLGLRSSPMSTSPTRNAAASPDAPAVIKREREPGSSPGEPATKRPYVDGDYNKTPDAHIKIANRGDKGKGDNSIVVSMDINGIMYQGVLFAQDRNSTSANSTAARNSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01492667;
- 90% Identity
- iTF_01492667;
- 80% Identity
- -