Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030522925.1
Location
JAPYZS010004683.1:1-3403[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-24 2e-20 73.6 0.0 1 89 62 148 62 148 0.94

Sequence Information

Coding Sequence
CCTAAGTTGAAAGGCCGGCCTCGGAGAAAGCGGAAAAAGCGCAGCGCCTCCCCTGGTGAATCTAGCAATGAAAGTGAGGCCTCGGTTGCGTCGACGTCCAAGAGCATTGTGACGAATTCGAATCATTCTGCCAGCATTGGACGGTCCGCAAATGTACGCCGCAGCGAGCGCAAAACCACTGCCGAAGAGAAGAAATTCCTCATGGATGTGCAAAACTTCATGAATTCGCGCGGTACTCCTGTTGGGAAAACTCCATTGCTCGGTTATAGGCAAAttgacTTATACTTATTTTACTCAAAAGTGCAAATGCTAGGAGGTTACGAATCTGTGAGTGCTGGGCGCTTATGGAAAACGGTCTATGATGACATAGGTGGAAATACAGCATCAACCAGTGCTGCCACAATTACTAGACGGCATTACGAAAgATTATTATTACCGTACGAGAGGTATCAACGAGGCGAGGATGCAAAATTGAAGCCCATCCAAGGACGTCGTACCAAAACAAGTAGCACGTCCGAGGACACGATGGCCGAACCGATGACGAAACAGGAACCCGAAAACAACTATCCAAGAGAGTCTTCGCCATCAATAGCCAGCGAGCCCATGTCCAATTGCAATTTGAATTCCAGTAACCACTCGAGTTCTCACTTTACGAGCATCGCGCCACCTGTACAGTCAATTTTATCCACAACGCCGTTTCTCCCGGGTGACAAACCGAGAAGTGATCCTGGCAAAACCTCGTCGCTACGGAGTGTCCGCGTGAAACCCGACCGGCTGAAATCATTGAACACGATAATCGCCGGTAGCGCCGCTCCTTCATCGCAGCCGCCAAGTCCGCCCCCTTCATCGAACACGTCAACGTCAACGCCTTCGAGCACACCTTCAACGACTCCTACGAATGGCACGAGTCAAACCGCACTCGAGCGTCAGTTGAACGCGAGTCCGCTGATGAGTCACCAGGTGGCGCCCTCTTCTTCGCCGAGCACACCCCCTACGGTGGTGACGTTAACGCCGCCCCCGGAGAAGGACATGAAGGACATCAAACTCGATGCCAAACAGACGAACCTCATTGCTCAGGGCAAAGAGAATATTCCTCTCTACGACGAGAAACCTCTGTACATTGAGAAAGTGGTGGCGCCACGGTCGCCCGAGGTCATCGATCTGGAGAGTGaagaaaaacttattattCCAAGtttcaaaaagagaaaattagAGATACTTAGGGAAGGAGGgTTGGAAGTGACGGCGGTAGAGCTGGACAGTCGACCGAGTGTGATTCAACCGCACGTGGTGGCGCCACACCCGAACGCCAAAGTCGAGGAGAAGGTTGCACCGACGACGCCGGCGGTCAGCACGCCGAAATTGATATCGGTGACGGTGACGCCGGATATCGGACACATGTTGCCGTCAAGGCCGAACAACAACGTGGCCGTGAGCAACAGCAACGTTAGCAACAGTAGCACAGCAACGAATAGTCGGGTGATAAACGTGGGCAACTCGGGCAACGCGCTGCTCCAGTTGTACGCGACGGCGGGTGTGACGCGAAGGTTCCCCGCGTCGACGCCACCTGTCCCGATGAACGACCGGCAGGTGCCACCAAGGGTCACCCAGGGCAGGTCGATCTTCTCGCATAACGAAAAGACTGTCTACGGCAATCCTAAAGAGATCCTCGCGGTGCCTAACAAGTACGTAGGCAGTGGTGGTGGGGTCAACTTGGTGCGCAGCGAGAACCCGCATCTTCCTGGCGGCGTGCTGGATCTTACGCAGAAGCAAACTTTCTCTAGGCCGAATCTCGAAATTGTGAGGGTACCTGTTTTATCTCGACCGAGTCCTCTGAATTTGGACACGAAAAGTTCGCAAAATTCAAGGTACACCATCGTTGTTCAACTAGTCTGA
Protein Sequence
PKLKGRPRRKRKKRSASPGESSNESEASVASTSKSIVTNSNHSASIGRSANVRRSERKTTAEEKKFLMDVQNFMNSRGTPVGKTPLLGYRQIDLYLFYSKVQMLGGYESVSAGRLWKTVYDDIGGNTASTSAATITRRHYERLLLPYERYQRGEDAKLKPIQGRRTKTSSTSEDTMAEPMTKQEPENNYPRESSPSIASEPMSNCNLNSSNHSSSHFTSIAPPVQSILSTTPFLPGDKPRSDPGKTSSLRSVRVKPDRLKSLNTIIAGSAAPSSQPPSPPPSSNTSTSTPSSTPSTTPTNGTSQTALERQLNASPLMSHQVAPSSSPSTPPTVVTLTPPPEKDMKDIKLDAKQTNLIAQGKENIPLYDEKPLYIEKVVAPRSPEVIDLESEEKLIIPSFKKRKLEILREGGLEVTAVELDSRPSVIQPHVVAPHPNAKVEEKVAPTTPAVSTPKLISVTVTPDIGHMLPSRPNNNVAVSNSNVSNSSTATNSRVINVGNSGNALLQLYATAGVTRRFPASTPPVPMNDRQVPPRVTQGRSIFSHNEKTVYGNPKEILAVPNKYVGSGGGVNLVRSENPHLPGGVLDLTQKQTFSRPNLEIVRVPVLSRPSPLNLDTKSSQNSRYTIVVQLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-