Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: stc
Assembly: GCA_030523145.1
Location: JAQQRF010000010.1:257745-261617[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.8e+04 -3.6 1.0 15 19 361 365 360 365 0.82

2 16 0.11 9.1e+02 0.5 0.4 4 10 394 400 393 400 0.95

3 16 3.3e-06 0.028 14.9 12.4 4 19 411 426 409 426 0.93

4 16 2.5 2.1e+04 -3.8 1.4 6 10 452 456 452 456 0.96

5 16 1.9e-05 0.16 12.5 15.6 1 19 462 480 462 480 0.91

6 16 2.6e-07 0.0023 18.4 13.0 1 18 518 535 518 536 0.97

7 16 0.00013 1.1 9.8 12.4 4 19 583 598 576 598 0.86

8 16 2 1.7e+04 -3.6 2.0 5 10 627 632 627 632 0.93

9 16 0.12 1e+03 0.4 7.6 1 11 638 648 638 649 0.87

10 16 3.1e-08 0.00026 21.4 11.1 1 19 665 683 665 683 0.98

11 16 2.4 2e+04 -3.8 2.1 6 10 712 716 711 723 0.71

12 16 1.5 1.3e+04 -3.1 5.7 10 19 730 740 728 740 0.79

13 16 1.3 1.1e+04 -2.9 1.0 7 13 744 750 744 751 0.80

14 16 2.3 2e+04 -3.7 0.9 6 12 766 772 765 772 0.73

15 16 3.9e-06 0.034 14.7 15.2 1 16 776 791 776 802 0.87

16 16 1e-05 0.087 13.4 13.6 1 19 808 827 808 827 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.8e+04	-3.6	1.0	15	19	361	365	360	365	0.82
2	16	0.11	9.1e+02	0.5	0.4	4	10	394	400	393	400	0.95
3	16	3.3e-06	0.028	14.9	12.4	4	19	411	426	409	426	0.93
4	16	2.5	2.1e+04	-3.8	1.4	6	10	452	456	452	456	0.96
5	16	1.9e-05	0.16	12.5	15.6	1	19	462	480	462	480	0.91
6	16	2.6e-07	0.0023	18.4	13.0	1	18	518	535	518	536	0.97
7	16	0.00013	1.1	9.8	12.4	4	19	583	598	576	598	0.86
8	16	2	1.7e+04	-3.6	2.0	5	10	627	632	627	632	0.93
9	16	0.12	1e+03	0.4	7.6	1	11	638	648	638	649	0.87
10	16	3.1e-08	0.00026	21.4	11.1	1	19	665	683	665	683	0.98
11	16	2.4	2e+04	-3.8	2.1	6	10	712	716	711	723	0.71
12	16	1.5	1.3e+04	-3.1	5.7	10	19	730	740	728	740	0.79
13	16	1.3	1.1e+04	-2.9	1.0	7	13	744	750	744	751	0.80
14	16	2.3	2e+04	-3.7	0.9	6	12	766	772	765	772	0.73
15	16	3.9e-06	0.034	14.7	15.2	1	16	776	791	776	802	0.87
16	16	1e-05	0.087	13.4	13.6	1	19	808	827	808	827	0.97

Sequence Information

Coding Sequence: ATGGCGACTTGGGATGGCTCCTACCAAGGTCCAGATGAGTCGAACTACCAGTATTATCCTTACGATTTCTGTGTTCGACCAATGGACCCGAACCCATGGGCCTACTATCCGCCGGCTGACAACACTCATCAGAGCAGTCAAGGGGCGTACGCTTCGAATCCTTCTATGAGCTATCCAGTCCCGAATCAGGACGTGTTCGGTAACTCTGTGACCAACTCGTACATATCGCCTACGATTGCTCAGGAGCGTGGAAACTACGCGCCCTCGCAGTTTGAAAACCACCAACCTTATCCCAGCAATAATAATCAAGTGTACAATAACGAAACCCAGTACTACCACAATTCCAATCGTCGAGACAACCAGGTTCATTATCCCAAGACTGATTCAAGCCAGAAGAAAAGTTCTGAGCCAAGTTCCTCCGgaaaaggagagaaaaagGCTCACCATAGAAGCGCAAAGCCAAGGACGTACGGTTCGAGCCGGTTGAATTGTGAGAATTTTGATTCGTCCATCTACGAGTCGCTTATCAACGAGGGAAATGCAAACGCAAGGATATTCGGAAACGGAAGTGAGGAACGGCGACAGGAGGAGGGGCAAAGAACTGGGGAGGACGATGAGGGTTACGATCCCAGGAGCAGTTACAGAAGCAACGAGAGACACCTGAATGATAAATTCCGAGGGGGCAAAAGTCGGTTTGGCAATTGGAATAAGGAGAAACAGTTTAATAGAATGGGCAATAAGAATGCTGGAAGGAAATTTGCCCCGAGGGAGCAAGAGAAAGAGTTCTCGAACTGGAGGAAGGACAAGGCCGGCACCAGTGCCAATAGTAAAAGTATGACTTTCAAAAAAGGTTATAACTCTAGTGGGAATTACAAGAAAGTTGAGATGGATGACGATGCAAGTCAACGAGAACGTTTGACTGAGCAGTTGAACAAGGGAGTACTAGAATGCTTGGTCTGTTGCGATCACATCAAACAGGCAGATTCCATCTGGTCTTGCGAGAATTGCTACCACGTCTTGCATGTGAAGTGCGTCAAGAAATGGGCCATTTCATCCAAAGACGACTCAGGAGCATGGCGTTGTCCAGCCTGTCGTAACCAGTTCAAAACAACTCCCTTGGACTACTTCTGCTTTTGCAGCAAGGTGAAGAATCCTGAATGGAACCGTCGCGACAACGCACACTCGTGTGGCGAGGTGTGCGGGCGCAACCGCTCGAATCTAAACTGTGTTCACAAGTGCACACTGCTGTGCCATCCGGGAAGCTGCCCCGAATGCTCTGCAATCGTTACCAAGCACTGCAATTGTGGCAAGATGTCCCAGACGGTTAAGTGCAGCACCGGCACTCCGCTGCTCTGCCAGAACGTCTGCGAGAAACTGCTGAACTGTCAGAAACATAACTGCCAAAGGAAGTGTCACGACGGGGATTGTGAACATTGCACAGAAAAGATACAGCAAAGCTGTTACTGTGGGAAAAACAATCGTGAGGTCGCATGTGAGGAAAACACACAAACAAAGTACGCGTGTGACGAGATTTGCGACAATCTTTTAGATTGTGGGAATCACCGGTGCACCAAACCGTGTCACCCTGAGGCCTGTGCGCCATGCTTGCTGAAGCCTGAGATCGTGACACACTGCTGTTGTCAGCAGACGCCCATCGAAAAGCCACGAACCAGCTGTCTGGATCCGATTCCTATTTGTAGTAAAACTTGCTCGAAGCCCCTGAAATGTGGCCAGCCTaGCGCCCCGCACATGTGTCGGTCCCAGTGCCATGAGGGTGACTGTCCTGAATGCACTTTGACAACGATGGTACGGTGTCGTTGCGGCAACATGGACAAAGAGATACCCTGCAAGGAGCTCACAACGAAAGCTGACGACGCACGCTGCGAGAAGAAATGCACAAAGAAACGCTCGTGTCGAAAGCACAAGTGCAATCAGCTATGCTGTATTGATATTGAGCACATTTGTCCTCTGATATGCTACAAGACGCTCAGCTGTGGACGTCACAAATGTGAACAAACGTGTCACATGTCTCGATGCCAGCCTTGTTGGAGAAGTAGTTTCGACGAGCTGTATTGTGAGTGCGGCGCTTCAGTGCTGTATCCTCCAATTGCTTGTGGCACGAGAAGACCAGCCTGCAACCAACCCTGTTCTCGACAGCATCCGTGTGACCATGAGGTGTTCCATAACTGCCACAGTGAGTCCACGTGTCCTCCTTGCACCGTGCTTACCCAAAAGTGGTGTCATGGAGGTCATGAGCTCCGCAGAAATGTTCCTTGCCACGTGAAGGAACTGTCATGTGGTCTGCAGTGTCACAAAGAACTCAGCTGTGGGCGCCACAAGTGCATCAATAATTGTCATCCTGGTCCTTGTGAAACTCCAGGTCAGGTCTGCGTTCAGCCTTGCACAATTCCAAGGGAGACTTGCGGTCACATCTGTGCTGCACCTTGTCACGAAGGAAAGTGTCCGGATACACCTTGCAAGGAAACGGTCAAGgtGACGTGTCAATGTGGTCATAGATCATCAACCAGACAATGCGCGGAAAACGCTAAAGAATACCACAGAATTGCGAGTGGAATTCTTGCCAGCAAAATGGCTGACATGCAATTGGGCCACTCTGTCAATCTCGATGAAGTATTCGGACAGAAGGCAAACAAAGCAAATCAACTTAAAACTCTCGAATGCAATGACGAATGCAAGACGGTCGAACGGAACCGAAGATTGGCTTTGGGCTTGCAGATCGTGAACCCTGACCTCACTGGCAAACTGACTCCGCGTTACAGCGACTTTATGAAACAATGGGCAAAGAAGGACCCAGCATTCTGTCAGATGGTACATGATCGTCTCTCTGAGCTCGTGCAATTGGCAAAAACGTCCAAGCAAAAATCACGCAGTTATTCGTTCGAGAGTATGAATAAAGATAAAAGGAGTTTCGTGCACGAATCGTGCGAACATTTTGGGTGTCAAAGCCAGGCTTACGATCAAGAACCGAAACGAAATGTTGTTGCCACTGCTGTAAAAGATAAGTGTTGGTTACCAAGTTACAGTTTATTGGAAGTTATTCAACGGGAAAATGGCCTTCGCAAAGTTCCAGGACCGATGCTCGAAAGtaccaaaataaaatctaaaagaaatactGAGATGCTCCTACTGAACGGAAGGAAGAATCAAAAGCCAACACCTGTACAAACACCGACAAAATCTCCTGAGCCAGAAATAGATTACTTTGAATTCACGGGtgtctaa
Protein Sequence: MATWDGSYQGPDESNYQYYPYDFCVRPMDPNPWAYYPPADNTHQSSQGAYASNPSMSYPVPNQDVFGNSVTNSYISPTIAQERGNYAPSQFENHQPYPSNNNQVYNNETQYYHNSNRRDNQVHYPKTDSSQKKSSEPSSSGKGEKKAHHRSAKPRTYGSSRLNCENFDSSIYESLINEGNANARIFGNGSEERRQEEGQRTGEDDEGYDPRSSYRSNERHLNDKFRGGKSRFGNWNKEKQFNRMGNKNAGRKFAPREQEKEFSNWRKDKAGTSANSKSMTFKKGYNSSGNYKKVEMDDDASQRERLTEQLNKGVLECLVCCDHIKQADSIWSCENCYHVLHVKCVKKWAISSKDDSGAWRCPACRNQFKTTPLDYFCFCSKVKNPEWNRRDNAHSCGEVCGRNRSNLNCVHKCTLLCHPGSCPECSAIVTKHCNCGKMSQTVKCSTGTPLLCQNVCEKLLNCQKHNCQRKCHDGDCEHCTEKIQQSCYCGKNNREVACEENTQTKYACDEICDNLLDCGNHRCTKPCHPEACAPCLLKPEIVTHCCCQQTPIEKPRTSCLDPIPICSKTCSKPLKCGQPSAPHMCRSQCHEGDCPECTLTTMVRCRCGNMDKEIPCKELTTKADDARCEKKCTKKRSCRKHKCNQLCCIDIEHICPLICYKTLSCGRHKCEQTCHMSRCQPCWRSSFDELYCECGASVLYPPIACGTRRPACNQPCSRQHPCDHEVFHNCHSESTCPPCTVLTQKWCHGGHELRRNVPCHVKELSCGLQCHKELSCGRHKCINNCHPGPCETPGQVCVQPCTIPRETCGHICAAPCHEGKCPDTPCKETVKVTCQCGHRSSTRQCAENAKEYHRIASGILASKMADMQLGHSVNLDEVFGQKANKANQLKTLECNDECKTVERNRRLALGLQIVNPDLTGKLTPRYSDFMKQWAKKDPAFCQMVHDRLSELVQLAKTSKQKSRSYSFESMNKDKRSFVHESCEHFGCQSQAYDQEPKRNVVATAVKDKCWLPSYSLLEVIQRENGLRKVPGPMLESTKIKSKRNTEMLLLNGRKNQKPTPVQTPTKSPEPEIDYFEFTGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493997;
90% Identity: iTF_01493997;
80% Identity: -