Tbro004746.1
Basic Information
- Insect
- Trissolcus brochymenae
- Gene Symbol
- Znf131
- Assembly
- GCA_030523145.1
- Location
- JAQQRF010000156.1:59898-63599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 6.5 7.2e+02 1.5 0.3 2 23 428 448 427 448 0.89 2 12 9.3 1e+03 1.0 2.8 1 23 480 504 480 504 0.91 3 12 0.11 12 7.0 1.1 1 22 515 536 515 539 0.91 4 12 0.061 6.8 7.9 5.0 2 22 561 581 560 584 0.90 5 12 3.3e-05 0.0037 18.1 1.6 3 23 600 621 598 621 0.92 6 12 0.00034 0.037 15.0 1.1 1 23 636 660 636 660 0.93 7 12 7.1 7.9e+02 1.4 3.3 2 19 679 696 679 701 0.91 8 12 0.0061 0.68 11.0 0.3 1 21 706 726 706 727 0.96 9 12 2 2.2e+02 3.1 0.5 2 23 748 769 747 769 0.93 10 12 5.8e-05 0.0064 17.4 1.3 2 23 787 807 786 807 0.96 11 12 0.0033 0.37 11.9 0.0 1 20 813 832 813 834 0.93 12 12 0.89 99 4.2 1.3 1 12 852 863 852 864 0.90
Sequence Information
- Coding Sequence
- ATGGAATACGACGACGACGACAATCATTTCTGTATCAAGTGTCACCTAACAATAAACGGCTTGGACAACTATGTACAACACCGTCAAATTGGGTGCCGCTCTGACGATGATAAATCTGGAACAGTTCACGATCCGCCATCAACTCCGACCACGGTATCTTATCCGGAAATCTTGAATGCCGATGCGTTCTTCAGCTCATTGGAATTGCAGAGTAGCTCCAAGTTAAATACTCGACGTATGTCAACGTTATTACTGGATCGATCGCGCAAGTCCAGCAAAACGGAAGACCGTCGCAGAAAGAACCGCAAGGATAAGAGTCCGGATGACTCGACTTCCAAAGAGAagctttcaaatttgatgCCAGTTGTTGCTGACGTGGATGACCCAACTGATCACTTGTTTATCCCGTCCCTCGTGGGCTTTCCAGACATTTTGGCGTCTTCCACCAAACCCACGTCCACCGTAACGTCAAACAAATCAACATCCACGCAATCCGTAGGAATTCCTGCGATTAAGAGTGACTCTGCGATGGATCGAAAACAGTTGGAAGAACCACAGATTCGTCAGGATCATCAAGAACCTTGGTTGGGTGATCCAGTCCTAAACGATCTAGTTGGGAATACTGAAAACAAAGTCCTATCGCACACGTCTTTGAATCGGTTTGAGTTTGATTATCAACAGGAAGAGGACTCGGATGACAGCAGTTTGAATGAATCTGAGGATGATGATTCTTATTCAGATTCAGATGAAGATAGAGATCTGTACCTTAGAGAACACACAGGTGGCAAATGGAAACCAGGATTAGCAACGATAACTGAAATTGTACAGGATCACGATGATGAAGACACAGAAGAGGAACAGCCACAAGAGCATCCACCACCTTCCTATACTGGTGGAAAGTGGAAACCTGCTGACAACTCTCTTCATAAGCATGATGAGTATGAGTCCAAGAGTTCCGGGGGACCTCCGCCGGGGCACACACGAGGAAAGTGGGTTCCCGGGGCAGGGTCTGACGTGGGCGGTGGCTACTGGTGCAGTCCTTGTGGAAGAAAACTCGCTTCCCGCTTGGTATACAACAGACATCTAATGTCCGATCTGCATGCCAGGAGAAGTGTACAGGAAATAGACGGAGACTTGCATCTTGCCAGAAGCAGTGTTTCTTTATTACATAAAAAGAGTACAAAGAGACTCAGAACAATTAATTCgAAACCGAAAGGAACAGCAGATTTGGAAGAagatgagaacaaaaaacgGATGCGACGACGGGAAAAAGCAATCGTCACCTGTGAGATATGCTTTGCGCGAGTGCGTCGCACGCAAATGGGCAAACATTTGCTTTCTCATTATCACTGCCGTGTGGCAGGTGTCAGTCCTAGCGATGCAAAAGCGCGACACTTCCTTTTGAATAACATGGTAAACGTCGTGCGTCAGTGTCCCTTCCAATGCGCGTCCTGTCGTTTTTACTGCAACACAGAAGATACCTTTTTGATGCACTGGAGGTCTTCTTTGCATTCTAACACAAACGAGAAAATGAGCGGAAGTTACAAGTGCACCGCCTGCAACTTCCGCTGCGAGGACAACGATGCCATGGAGACTCATTTATTGAGCCGAGGACATCGGGACGTGGTTTCCGTGATGAATGGCTCGGTACCGGTGGTGATTCGTCGTCAGAGAATTTTGTCTTGCTGTACATGCGGTGCACATTTTCGatacaattttcagttaCGTTTGCACCAAAAGGAAACCAAACATAGTGTTGATGAAACAGCCTCGGACGAATACCAGAAGCGTATGTGTTGCAGCTTGTGCGGTAAAGTTTTTCGCAACTACATCTCACTCCAACGACACCAGTTGGCATCGCACGTcaagaataatgaaaacagCGAGGGGAATGAGCCATCGCCCTACTTTTGTTCGTACTGCGATGAGACGTTTAAGACTTCGAAAGAGGCTGTCATGCACCGAAGAACAGCTAATCACAAAGCGGTTGTAAAGATGCAGAAATCTGATTGCAATCAAACTGCAACGAAAAGAGAATGCAAACACTGCCCAGATCAGTTTGcagatttgaatgaatttagaCAGCATTGTTTAGAGAAACATCTCGAGTTCTGTTACAGATGCCTCCGTTGCGGCATGCCTTTTGCAATATCCCAAGATCTGACACATCATACACGGCAAAACAAGTGTAGGACTTCTAATATCGAACCTGCTGCAATCAGTGATAACGAAAATCATTGGAGATGCAAGAAATGCGCATTCACAAGTGAGTCGCAGGCGGAATTTCTACTCCACGAGTCCTACCATGCAGGACCCGTGGAAACAGATACTAATGAGGGCAAAAAAAGACCAAAATTGATGTGTAACATatgcgaaaaaatttttaacaaaaatacctTGAGGTCACATATGAGGAGTCATACTGGAGAACGTCCTTTTGCCTGCACAGAATGCTCTGCCACTTTCATAAGGCTGCCCGAGTTGAAGAAACACGCTCAGTTGTGCGGAAAATCATCCTCGCAGGAAAAAACTAAGGACGACAAAACACGAAAATATGCTTGCCAAGTGTGCGGTGCTACATTTTGTACTCGGTAA
- Protein Sequence
- MEYDDDDNHFCIKCHLTINGLDNYVQHRQIGCRSDDDKSGTVHDPPSTPTTVSYPEILNADAFFSSLELQSSSKLNTRRMSTLLLDRSRKSSKTEDRRRKNRKDKSPDDSTSKEKLSNLMPVVADVDDPTDHLFIPSLVGFPDILASSTKPTSTVTSNKSTSTQSVGIPAIKSDSAMDRKQLEEPQIRQDHQEPWLGDPVLNDLVGNTENKVLSHTSLNRFEFDYQQEEDSDDSSLNESEDDDSYSDSDEDRDLYLREHTGGKWKPGLATITEIVQDHDDEDTEEEQPQEHPPPSYTGGKWKPADNSLHKHDEYESKSSGGPPPGHTRGKWVPGAGSDVGGGYWCSPCGRKLASRLVYNRHLMSDLHARRSVQEIDGDLHLARSSVSLLHKKSTKRLRTINSKPKGTADLEEDENKKRMRRREKAIVTCEICFARVRRTQMGKHLLSHYHCRVAGVSPSDAKARHFLLNNMVNVVRQCPFQCASCRFYCNTEDTFLMHWRSSLHSNTNEKMSGSYKCTACNFRCEDNDAMETHLLSRGHRDVVSVMNGSVPVVIRRQRILSCCTCGAHFRYNFQLRLHQKETKHSVDETASDEYQKRMCCSLCGKVFRNYISLQRHQLASHVKNNENSEGNEPSPYFCSYCDETFKTSKEAVMHRRTANHKAVVKMQKSDCNQTATKRECKHCPDQFADLNEFRQHCLEKHLEFCYRCLRCGMPFAISQDLTHHTRQNKCRTSNIEPAAISDNENHWRCKKCAFTSESQAEFLLHESYHAGPVETDTNEGKKRPKLMCNICEKIFNKNTLRSHMRSHTGERPFACTECSATFIRLPELKKHAQLCGKSSSQEKTKDDKTRKYACQVCGATFCTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01493949;
- 90% Identity
- iTF_01493949;
- 80% Identity
- -