Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: Rreb1
Assembly: GCA_030523145.1
Location: JAQQRF010000053.1:388516-397377[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.8e-05 0.0076 17.2 0.1 1 23 80 102 80 102 0.98

2 15 7.6e-06 0.00084 20.2 4.2 1 23 108 131 108 131 0.98

3 15 3.1 3.5e+02 2.5 2.7 2 23 207 228 207 229 0.95

4 15 0.062 6.9 7.9 2.8 2 20 231 249 231 251 0.94

5 15 0.36 40 5.4 1.3 1 21 301 321 301 322 0.93

6 15 0.022 2.5 9.2 0.2 1 23 435 457 435 457 0.96

7 15 0.00012 0.013 16.4 0.6 1 23 466 488 466 488 0.98

8 15 0.0063 0.7 11.0 5.5 1 23 494 517 494 517 0.97

9 15 0.02 2.3 9.4 3.8 1 23 900 923 900 923 0.95

10 15 0.00078 0.086 13.8 0.3 3 23 1203 1223 1201 1223 0.97

11 15 0.038 4.3 8.5 6.5 1 23 1229 1252 1229 1252 0.96

12 15 0.002 0.22 12.6 1.9 1 23 1300 1324 1300 1324 0.97

13 15 1.2 1.3e+02 3.9 2.1 1 23 1410 1433 1410 1433 0.93

14 15 0.0019 0.21 12.6 0.3 2 23 1473 1494 1472 1494 0.97

15 15 0.00039 0.044 14.8 4.9 1 23 1500 1522 1500 1522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.8e-05	0.0076	17.2	0.1	1	23	80	102	80	102	0.98
2	15	7.6e-06	0.00084	20.2	4.2	1	23	108	131	108	131	0.98
3	15	3.1	3.5e+02	2.5	2.7	2	23	207	228	207	229	0.95
4	15	0.062	6.9	7.9	2.8	2	20	231	249	231	251	0.94
5	15	0.36	40	5.4	1.3	1	21	301	321	301	322	0.93
6	15	0.022	2.5	9.2	0.2	1	23	435	457	435	457	0.96
7	15	0.00012	0.013	16.4	0.6	1	23	466	488	466	488	0.98
8	15	0.0063	0.7	11.0	5.5	1	23	494	517	494	517	0.97
9	15	0.02	2.3	9.4	3.8	1	23	900	923	900	923	0.95
10	15	0.00078	0.086	13.8	0.3	3	23	1203	1223	1201	1223	0.97
11	15	0.038	4.3	8.5	6.5	1	23	1229	1252	1229	1252	0.96
12	15	0.002	0.22	12.6	1.9	1	23	1300	1324	1300	1324	0.97
13	15	1.2	1.3e+02	3.9	2.1	1	23	1410	1433	1410	1433	0.93
14	15	0.0019	0.21	12.6	0.3	2	23	1473	1494	1472	1494	0.97
15	15	0.00039	0.044	14.8	4.9	1	23	1500	1522	1500	1522	0.98

Sequence Information

Coding Sequence: ATGGCAAGGAAGAGGGTAGGTTGGGGTGGTTACGGGTGGATAGTCCAAGtgTCGACGGATTTGAACCCAGGCAGACGTACCAATGAGACGCTGAACCTGACATCGTCAATGATAACTGGGCGCGCGATTGCTTGTCGAATTTGTAACTTGATGCAGCCAACGTTCGAGGACCTGGCAGAGCATGTGCAACAGGCACACTTTCAGCTGCTGAACAACAAGGAATGCCGCGAGAATGAGTACGTTTGCAACCTGTGCGGGAAGATCCTGAGCTCAGCGAGCTCATTGGACCGGCACACTTTGGTGCATTCAGGCGAGCGTCCCTATAAATGTAATCACTGCAGCATGTCATTCACGACCAACGGCAACATGAACCGTCACGTGAGGAAGAGTCACCGAACGGCATCGCCCAACAGCGTCACCGACTCCGAGGAAGCCAGTGACGACTCCGGAAACTCGTTGCGAAGAAGTCATCTCGAGGAGGAATACAACAACAACGAGATCTCCAAGTCAATTGCGCTCAATTGCTCGAAGCGCAAGATCCTCACTTACGCTAAGGCCGATGACGAGATCAAGTGCAAGAGAAATCGCAGCGAGGAGCAGCTTGACGGCGACTCGCCGAGGTGCTATGTGTGCCGCGTGCGTTGCGTCAACGAGGCCTACTTGGACGAACACGTGAAGAAGCACCACCCAAGGTGCAAGAATTGCAAGCGAGTGTTCTCGGATGATTGCGAGATGCAGAAGCACCAGTATAGCTGTCGCGCGGGTAAGGACAGTGGCGAAAGCATCCGGGGTTTCCAGGACCTCACATTCATTGACTTCTCAACCGGCAAGTTTCCCACTATTGCTAGAAGCATGTGCGAAGAGAAGCTGCACCGTCCACCGTCGCGCGAGATCGCCAAGTACCAGTGCTACAAGTGCAATCATGCCTTCCCCTGTCAATCGGCGTTGGATGCCCACGAGAGGGACTGCGGCCTGCCCGTCCACGAGAGGCACCCGGACGAGGAGCTTTCCAACACGACCGAGTTCTTCGACGGGTTGCACCTACAAAACAAGGCGGCCCTGGCTGAGGCGAAAGAGGGCAAGGACCTGGCAGACATCCCGGCGATTCTTTCTGTCACATCGGGTTCCATCTTCCATAACCTGGCGAGATCTGACACGAGCACTCCGGACATCTGTCTGAAGAAAAACGGCCAAAATGCAGGTTCCACTTGTTCGTCTGGGACCCCGTCTTCAGACCATCACGAAGAGGAGATGCAGGACGACTTTGCACACGAATTCCGGAAGATGAAACTTAAGGGCGAGTTCCCGTGCAAGCTGTGCACGATGATATTCCCGAACCTGCGTGCTTTGAAGGGTCACAACCGGGCTCATATGAACGTCGGACCGAATGAACCGTATCCGTGCAACATGTGCCCGTACAACAGCACGGACAAGCAAACTCTGATCAAGCATCTGCGATCACACAATGGGGATCGTCCGTTCGAGTGCAAGGAGTGCCATTTTGCATTTACAACCAAAGCCAACTGCGAGCGACATGTGAGAAATCGTCATAACAAAACGGACAAGCGTGAGATCCAAAGCTTGATTCATAATCATCCGATTGAAGAGTCTCCTGTGGACAGTATCGCCGAGAAACCTCGCGATGACGCCAAGAAGACCCCAAAGATGGTCAGCGATCGGAACGAGTTGTTACGTCAAGCGTCACAGATCCACCTGCCCCCGCAGCCTCATTACCTGCCGACCCCGATTGACGCAAAGCCGATCTTATTGGCGCAGGAGACGCTGAAACGATCGATGCAAGCTGGCTTGTATGACATGACCATGATGAACCACTTCGAAAGCTCGAGCTTGTTCATGCGAGGACAGTACAACCAAAGACCGGAACCTGCCTTCCGAGGCGAGGAGTTGGACCAGCCGCAGAACCTGTCTGTTAGAATCGACAGCACCAAGAGCGAGGATGGTCGTGATTCCGCAAGCTCGGGAATCAACTCACCTCTAGTCAATGAAGCCAATGTTCCAGCCCACCAAAGAAATGAAGCTAGTCCATCGAGCATTTCCCGGGACAACAGTCTGAACGACGATGGGCCCCTGGACCTGTCGATGGACGTGTTAGATTTAAGTAAAAAGTCATCGGATAAGAAGAAGGTGACCAACGGCACATCTGAGAACGACAACAACAACACTTCCGCCAAAGACTCGGAGAACAACAACTCGTACCTCAACATCAACCAGCTTCTTTACAGTCAAGCTTTGCTGTCAGGAGCTACTTCGACCAACTTTCAAAACCTCTACAACAAGGAGTACATGCTCCGTATGCACATGAGCAACTCGCCCATGTTCCACTCGTACCTACTGAATCAACACTTTCTCAATGATTATCCATTGAAGGACACCATTCAGCAGAAGGAACTCGTTCGAGGGCTTCAAACCAGTGGCGGCAGTCTGGTCCAGTCGGTGATGGGAAACCCGGCATTTCCGAATTCGGCATCCTTGCCAATCGGATCGCTCACATCCATGGGCACCGAGCACACCAACAGCTTCAAACCGGTGAACTCGTCGCAGAGCGTGACACCAGTCAGCACTCAGGAAAATGTCAATTCTACGTCGCCATCCACCGCGAACTCCGTGAGGATGGTCCTCAAGAATGGCCATCTGATGCCCAAGCAGAAGCAACGAAGGTACAGAACTGAGAGGCCGCACGTCTGTCACATCTGCACGGCAAAGTTCACCCTGCGCAGCAACATGGACCGACACGTGAAGCAACAGCATCCTGCAGTTTGGAAGAAGAGACCCCGCAACGCGCGATCCAACAGAGGTCGTCCGCCATCTAGTCCCAGGAAGATGAACATTCGCATTCGCAGACCGGACACGTCCATGTCGCAGTCGTACGATGGGTACTATCAGGACATGGACCAGTCAACGGACACTGAAAATAACAAGCATTCGATTTCGAGTCAAGTCAAGTACGCCATCTTGGCTCAGCAGCAGAAGAATTGCAAGACCGAGCCAAATGAGTCGGACGAAGAGCTTGTCATTGATGAGGAACCGAACGACAAGGATTCCTGTGAATCGGTGGCCACTTCCGATTGCGGCTCTAGTATGCTTAAGGAGACGCTGCAGGCTGGCGAGAGGATCAACGAGATCAAATCAGAGGAGGTGTTCGATCTGTCCAAGTCGAGGTCGCACTGTGACACTGATAATAACAACGAAGACTGCGACAGATATGGCAATCCACTTCCCGGGACCTCCGGAACCAAAGCCGCGACTAGTTCAATACTGACCGTCAGTAGGGATACCAAAGTGATGCACCCCGAGGCTCGGGACATCGAGAACTGCGCCGTTGATCTGGCCAGTGTCTCTGACATCGTTGACAACGCGACCCAGCAGTATCAGCAATTTCAACCTCACTACATGAGCGAGGAAGAGGGACTGGTTGCCTCGGCCAGTGACGGCAACAACTCGTGCAGCGACGATAAGTCGCTTCCTGATTCCGTAAACTCTGCGAGTTCCAACCAGTCGGATATGTCCAGCAAGAAGAAGacgatgaagaaaaagaagatgatgAAGAAGAAGTCAGCCTACTCGACTGCACCGAACCGAGTCAACTGTCCGTATTGCCAAAGACAATTCCCCTGGACGTCGTCCTTGAGGCGCCACATCCTCACTCACACTGGGCAGAAACCGTTTCGATGCAAGCACTGCGGTCTTCTGTTCACCACCAAGTCCAACTGCGACCGCCATCTGATAAGAAAACATCCGGGTAATGGTATCGGAGCAGCTGAGACACAAGAGACCATCAACACCAAcatcaataacaataacaatgggAATAACAATAATCCATCCATTCTCAACAACAACAGTGCCTTTGCCATGAGGAACGTCCCTGAACGGCCTTACAAATGCAACTACTGTCCAAGCTCGACCTTCTCGACCATCGGGAACTTAAAGAAGCATCAACAGTCTAAACATCCTCATCAAAGAAAATCGAGATCAACCACTCCATTGAGCGACCAACCCAACAGTCCCCAAGACCACTCAGTGAAGCAAGAGGATCAGAGCGAGTATGAGAGTTCGTCAACCACTTCGGACAATCCAGAGAACATCTCAACGAGCACGAACCCGGAACTGTCAAGTTCCAAGCTGATGGACGATTCCCCCAACAGCAACATGCGATCCAAAAGGTCTCCCAGGTCACCGTCTTCGCCGAACCCTACCGAGACTCCTTTCAAGTGTCACCTCTGCGACAGCGGCTTTGCCGTTAGGGACGACTGCCTGAATCACCTAAGTGTTAACCACACCGCCCAATTTGAGGAGCTCATCCGCAAAACGTCGTTCGACGAGGAGACTCGTCAGCGCTCCGCCAGTGACAACGAAGAGAGGCGATCGAAGCCTGATTATAGCCACAGAAAGGTCAAGTGTGCTTTTTGTCTTCGTCCTTTCTGGTCAGCTGAAGATCTAAGACGCCACATGCGGACACATACAGGTGAAAGACCTTTTACTTGTGACGTGTGCGGACGAAAGTTCACTCTGAAACACAGTATGCTTCGACACAGAAAGAAGCATAGCACCAAACACATCGAGAAGGCCAACATGAAGAAAGCTTTGGCAGAGGGCAACGAAGTTGGTTCCAACCTGTCCGTCATAGCCCCGAGAAGTCACCAGCAACTATCTATGTCCACGATCTTCGATAGCACCCGTGCTTCTAGGATTCGTGACAGGATCTCTCTACCGACCGTCACACCTGTGGCAACCGGTGACGCTGCGCCAAGTAGTTTGGTAACATTCAATCGCTACGAACAACTCAGCAACCTTACTGGGAGAATGGAGAACATCAACGTCGATGTTGATCCGAATGATAACGCGGACGTGGCGgacaataatgataatgatctGATTTCTAACTTGTTAGGCATCAGAGATAAGAGTATTATTGATAAAGTACTCCAGGCAACGCCCGATGACGCTGCAAAGCTCCTAGGTGTTAAGGACAACCAGGAATAA
Protein Sequence: MARKRVGWGGYGWIVQVSTDLNPGRRTNETLNLTSSMITGRAIACRICNLMQPTFEDLAEHVQQAHFQLLNNKECRENEYVCNLCGKILSSASSLDRHTLVHSGERPYKCNHCSMSFTTNGNMNRHVRKSHRTASPNSVTDSEEASDDSGNSLRRSHLEEEYNNNEISKSIALNCSKRKILTYAKADDEIKCKRNRSEEQLDGDSPRCYVCRVRCVNEAYLDEHVKKHHPRCKNCKRVFSDDCEMQKHQYSCRAGKDSGESIRGFQDLTFIDFSTGKFPTIARSMCEEKLHRPPSREIAKYQCYKCNHAFPCQSALDAHERDCGLPVHERHPDEELSNTTEFFDGLHLQNKAALAEAKEGKDLADIPAILSVTSGSIFHNLARSDTSTPDICLKKNGQNAGSTCSSGTPSSDHHEEEMQDDFAHEFRKMKLKGEFPCKLCTMIFPNLRALKGHNRAHMNVGPNEPYPCNMCPYNSTDKQTLIKHLRSHNGDRPFECKECHFAFTTKANCERHVRNRHNKTDKREIQSLIHNHPIEESPVDSIAEKPRDDAKKTPKMVSDRNELLRQASQIHLPPQPHYLPTPIDAKPILLAQETLKRSMQAGLYDMTMMNHFESSSLFMRGQYNQRPEPAFRGEELDQPQNLSVRIDSTKSEDGRDSASSGINSPLVNEANVPAHQRNEASPSSISRDNSLNDDGPLDLSMDVLDLSKKSSDKKKVTNGTSENDNNNTSAKDSENNNSYLNINQLLYSQALLSGATSTNFQNLYNKEYMLRMHMSNSPMFHSYLLNQHFLNDYPLKDTIQQKELVRGLQTSGGSLVQSVMGNPAFPNSASLPIGSLTSMGTEHTNSFKPVNSSQSVTPVSTQENVNSTSPSTANSVRMVLKNGHLMPKQKQRRYRTERPHVCHICTAKFTLRSNMDRHVKQQHPAVWKKRPRNARSNRGRPPSSPRKMNIRIRRPDTSMSQSYDGYYQDMDQSTDTENNKHSISSQVKYAILAQQQKNCKTEPNESDEELVIDEEPNDKDSCESVATSDCGSSMLKETLQAGERINEIKSEEVFDLSKSRSHCDTDNNNEDCDRYGNPLPGTSGTKAATSSILTVSRDTKVMHPEARDIENCAVDLASVSDIVDNATQQYQQFQPHYMSEEEGLVASASDGNNSCSDDKSLPDSVNSASSNQSDMSSKKKTMKKKKMMKKKSAYSTAPNRVNCPYCQRQFPWTSSLRRHILTHTGQKPFRCKHCGLLFTTKSNCDRHLIRKHPGNGIGAAETQETINTNINNNNNGNNNNPSILNNNSAFAMRNVPERPYKCNYCPSSTFSTIGNLKKHQQSKHPHQRKSRSTTPLSDQPNSPQDHSVKQEDQSEYESSSTTSDNPENISTSTNPELSSSKLMDDSPNSNMRSKRSPRSPSSPNPTETPFKCHLCDSGFAVRDDCLNHLSVNHTAQFEELIRKTSFDEETRQRSASDNEERRSKPDYSHRKVKCAFCLRPFWSAEDLRRHMRTHTGERPFTCDVCGRKFTLKHSMLRHRKKHSTKHIEKANMKKALAEGNEVGSNLSVIAPRSHQQLSMSTIFDSTRASRIRDRISLPTVTPVATGDAAPSSLVTFNRYEQLSNLTGRMENINVDVDPNDNADVADNNDNDLISNLLGIRDKSIIDKVLQATPDDAAKLLGVKDNQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493824;
90% Identity: iTF_01493824;
80% Identity: -