Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: BCL11A
Assembly: GCA_030523145.1
Location: JAQQRF010000024.1:421709-430562[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.016 1.8 9.7 0.1 2 23 175 197 174 197 0.96

2 6 1.5e-07 1.7e-05 25.5 1.7 1 23 480 502 480 502 0.99

3 6 0.00011 0.012 16.5 0.3 2 23 519 541 518 541 0.97

4 6 1.2e-07 1.3e-05 25.9 2.9 2 23 743 764 742 764 0.97

5 6 8.3e-06 0.00092 20.0 3.3 1 23 770 792 770 792 0.99

6 6 1.1e-05 0.0012 19.7 0.4 1 22 800 821 800 821 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.016	1.8	9.7	0.1	2	23	175	197	174	197	0.96
2	6	1.5e-07	1.7e-05	25.5	1.7	1	23	480	502	480	502	0.99
3	6	0.00011	0.012	16.5	0.3	2	23	519	541	518	541	0.97
4	6	1.2e-07	1.3e-05	25.9	2.9	2	23	743	764	742	764	0.97
5	6	8.3e-06	0.00092	20.0	3.3	1	23	770	792	770	792	0.99
6	6	1.1e-05	0.0012	19.7	0.4	1	22	800	821	800	821	0.97

Sequence Information

Coding Sequence: ATGTTGCGTCTGCGGATGACCTCAGGACCTATCCTCACGGCCATTCGTAGGAGAATTATAAcGGAAACATCGCAAGGTAACACCTCGCCCGATACCGTCCAGTGTGGAGGATGTCGAGCATCGTACCCTTTGGGGGACATAGTTCGATTCATCGAGCACAAGGTGAATCACTGTCGCAGCTCATTGCAAGGCTGCCAGAGTCCGCCGCCGGCAGCTGCGCCAGAAGATTCGGACCCGGAGGACGCCCTGGCTCTGAAAGTAGTAGAGCAGGAGAGATTAAACTCGGTGCCGAGCATTTCAGCACCGATAAACAAACGAGTCGGAAGGGTTGAGAGCCCGCCGACGCCCCAGGGCTCGGTGCCCGACGGAGGCAGCCCCATCGAACTCAGGGCCAGCGCCAGCTCGACGCCCAAGAGACGGACAGAGGGCCCTGACGAGGACAAGGATGAAGTGgccaaaaaagtgaaaacggAATCTGTCGATGCTGATACCAACACTGTTAATTCTGAGCCCAAGTGGTTGCAGTGCTCGCAGTGTTCCCGTCGACTGGCGTCTGCGTGGGAGTTGCTGCAGCATGCACAAACCGTGCACGGAGCGAGACTTTACTCGTCTTCGTCGTCAACGAGTTCGTCGTCTAACACGCCGGCTCCGAGCCCACCGACCCCCACACCAGTGCAGTCTCATCACTTGAGTCCACCGAATCATCTGAACCTCAGCAATAAATCTAGTGGTAGTTCATCAGTGGCGAACTCCTCCGGCGGAGCCAACAGTAGCGGCAGCAGCGGAAGTCGACAGCTGCCCTCTTCGGCGTCTCTTGTCGCAGACCCTTTGCACACCTTTCTGAGATTACCGCAGCATCTGGAGCGAAGCTTCCCTCCGATGTTTAGGCCAGACTTTCTCGGCCTGAACCCGTATCGTCTGCAAGATCTACAGAACGCCACGAGGAACCTACAAAACCTCGGAGACCCTTTGCGAGGGATGGATGGACTAAACTTGGGCGATCCCCTAGTGAGAAGTTCACTCGATACCCTGAACAACGCTAGAAACCTCGCGAATCTTGCTGAGTTGTCACACAGCAGAGGTCTTACAGGTCAAGCACACCCGCCACCACTCGAAGCGAACCTGGATTTTTACTCGGCGCGCCTAAGGAGCCTCGCTAACCCGTCCTTAGGCGCGGCTCCTCAATCCAACCCCCCTACAAATGTGAATTCGATTATCTCGAATGTTCAGCAGTCTCACTCGGTCGAATCACCTAGCCCGGCACCTGGAATTGTTACCAATCTGACTCTGAACCACCAAAAGGAGAATTCCCCACCCAGCTACACGCAGAGCCCTGTAGCTCAtcataacaacaataataacaactcGACTGATAGTGAGAAAACCAGTCCCCCTGTAGCTTCGACGCCAATCATTACTGCAAGTGCGGAAACCGTTTACACCTGCGATGTCTGTGACAAGAAGTTCCGCTTCCAGTCAAACTTGATAGTGCACCGGCGAAGTCACCAGGAGAAAGAGAAGCAGGATCATTTGCAAGAGAATGTTCCGATCATCAGGTGTGATGTCTGCGAATTGGAGCTGTCCAGCTACAGCGAGTTGCGGAAGCACATGAGAAAAGAGCATCAGGAGTCGCTGAACACGGCCTCCAGTCCACAGGGAAGTGTAGAGACGGTGCTCGACGATGGCAGCAGCTGTGATGAAAATATGGATCTGGACGATCCAGAGGACGATACCAAAGGACGTGATGATGCTGAGGAAAATACTCCCGAAGATTTAAGCACCACGCAGGGTCAGAGTAGTGAGGAGGGCTGCAACATGCGAGTCGACCAAAAACCCAGCCTAGTCGGAGACCTCATGGAAAAGTTTGGACTAAGCAACATTGCACAGTACTCGGAAGCCTATCGTCAGGCCCTTCAGGAAAATCATCGGAGCAGCTTCATCAAAACTGAATCGCCCTCAAGTATCACAAATTCTctcaacaacaacaaagagAAAGATAGCGCTCTTTCACCAACCAATTACAACTCGCCGACAACGCCAAACATTTTCTCCGGTCAGGGGTTCCCGAGAACCGCTGGTCCCGATTTCGGAGGACTCTGGCTGCCAAGTCCGCACTACCTCGAGAACAACGAATTCCGCAAGGCTTCAAAAGCCACCACGTCCAACCTCTCACTCCAGGGTCTTCCTAGTCCGCTTATGAAAAAGGAGCGCAGCGGAAGGAATGACACCTGCGAATACTGCGGAAAAGTTTTCAAGAACTGTTCGAACCTTACGGTCCATAGGAGATCACACACCGGCGAAAAGCCCTACAAGTGTGAGCTCTGCTCGTATGCTTGCGCTCAAAGCTCTAAACTGACACGGCACATGAAGACCCACGGAAGACACGGCAAGGATACTTACAAGTGCCGCTTCTGCGACATGCCCTTCTCGGTGCCGAGCACTCTTGAGAAACATATGCGCAAATGCGTTGTGGTCGTACAGCAAGGTCCCAAACTAGGGATACCTTATCCCAGCAGTCAGGATGAGGACTCGTCTCTGAGTACCAAAGACACTTGA
Protein Sequence: MLRLRMTSGPILTAIRRRIITETSQGNTSPDTVQCGGCRASYPLGDIVRFIEHKVNHCRSSLQGCQSPPPAAAPEDSDPEDALALKVVEQERLNSVPSISAPINKRVGRVESPPTPQGSVPDGGSPIELRASASSTPKRRTEGPDEDKDEVAKKVKTESVDADTNTVNSEPKWLQCSQCSRRLASAWELLQHAQTVHGARLYSSSSSTSSSSNTPAPSPPTPTPVQSHHLSPPNHLNLSNKSSGSSSVANSSGGANSSGSSGSRQLPSSASLVADPLHTFLRLPQHLERSFPPMFRPDFLGLNPYRLQDLQNATRNLQNLGDPLRGMDGLNLGDPLVRSSLDTLNNARNLANLAELSHSRGLTGQAHPPPLEANLDFYSARLRSLANPSLGAAPQSNPPTNVNSIISNVQQSHSVESPSPAPGIVTNLTLNHQKENSPPSYTQSPVAHHNNNNNNSTDSEKTSPPVASTPIITASAETVYTCDVCDKKFRFQSNLIVHRRSHQEKEKQDHLQENVPIIRCDVCELELSSYSELRKHMRKEHQESLNTASSPQGSVETVLDDGSSCDENMDLDDPEDDTKGRDDAEENTPEDLSTTQGQSSEEGCNMRVDQKPSLVGDLMEKFGLSNIAQYSEAYRQALQENHRSSFIKTESPSSITNSLNNNKEKDSALSPTNYNSPTTPNIFSGQGFPRTAGPDFGGLWLPSPHYLENNEFRKASKATTSNLSLQGLPSPLMKKERSGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCDMPFSVPSTLEKHMRKCVVVVQQGPKLGIPYPSSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01214286;
90% Identity: iTF_01493832;
80% Identity: -