Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: Ir25a
Assembly: GCA_030523145.1
Location: JAQQRF010000103.1:189669-197449[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 1.9 2.1e+02 3.2 4.5 1 23 454 476 454 476 0.92

2 29 1.1e-06 0.00012 22.8 2.3 1 23 482 504 482 504 0.99

3 29 0.00024 0.027 15.4 0.1 1 23 510 532 510 532 0.95

4 29 0.0015 0.17 12.9 1.3 1 23 538 560 538 560 0.95

5 29 9e-08 1e-05 26.2 0.4 1 23 566 588 566 588 0.98

6 29 0.00019 0.021 15.7 3.9 1 23 594 616 594 616 0.98

7 29 0.00024 0.027 15.4 0.5 1 23 622 644 622 644 0.95

8 29 3.8e-05 0.0042 18.0 1.5 1 23 651 673 651 673 0.97

9 29 2.3e-05 0.0026 18.6 1.5 2 23 680 701 679 701 0.97

10 29 0.00079 0.088 13.8 0.1 3 23 709 729 708 729 0.97

11 29 1.1e-05 0.0012 19.7 1.6 1 23 733 755 733 755 0.98

12 29 0.00028 0.031 15.2 0.2 2 23 809 830 808 830 0.97

13 29 2.8e-06 0.00031 21.5 1.9 1 23 836 858 836 858 0.98

14 29 8.7e-05 0.0097 16.8 4.4 1 23 864 886 864 886 0.98

15 29 0.0045 0.5 11.4 0.8 1 23 892 914 892 914 0.98

16 29 0.00015 0.017 16.1 1.5 1 23 920 942 920 942 0.95

17 29 0.00034 0.038 15.0 3.4 1 23 948 970 948 970 0.97

18 29 0.011 1.2 10.3 1.5 2 23 977 998 977 998 0.98

19 29 3.5e-06 0.00038 21.2 0.8 1 23 1032 1054 1032 1054 0.98

20 29 3e-06 0.00034 21.4 2.8 1 23 1060 1084 1060 1084 0.94

21 29 0.00079 0.088 13.8 0.6 1 23 1116 1138 1116 1138 0.97

22 29 0.0013 0.14 13.2 3.1 1 23 1144 1166 1144 1166 0.97

23 29 0.00013 0.015 16.3 1.6 1 23 1170 1192 1170 1192 0.97

24 29 6.4e-05 0.0071 17.2 1.8 1 23 1198 1220 1198 1220 0.98

25 29 7.1e-05 0.0079 17.1 0.8 1 23 1251 1273 1251 1273 0.97

26 29 0.026 2.9 9.0 8.3 1 23 1307 1329 1307 1329 0.97

27 29 4.6e-05 0.0052 17.7 0.1 1 23 1335 1357 1335 1357 0.98

28 29 0.0077 0.86 10.7 6.6 1 23 1556 1578 1556 1578 0.97

29 29 0.22 25 6.1 0.8 1 23 1584 1606 1584 1606 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	1.9	2.1e+02	3.2	4.5	1	23	454	476	454	476	0.92
2	29	1.1e-06	0.00012	22.8	2.3	1	23	482	504	482	504	0.99
3	29	0.00024	0.027	15.4	0.1	1	23	510	532	510	532	0.95
4	29	0.0015	0.17	12.9	1.3	1	23	538	560	538	560	0.95
5	29	9e-08	1e-05	26.2	0.4	1	23	566	588	566	588	0.98
6	29	0.00019	0.021	15.7	3.9	1	23	594	616	594	616	0.98
7	29	0.00024	0.027	15.4	0.5	1	23	622	644	622	644	0.95
8	29	3.8e-05	0.0042	18.0	1.5	1	23	651	673	651	673	0.97
9	29	2.3e-05	0.0026	18.6	1.5	2	23	680	701	679	701	0.97
10	29	0.00079	0.088	13.8	0.1	3	23	709	729	708	729	0.97
11	29	1.1e-05	0.0012	19.7	1.6	1	23	733	755	733	755	0.98
12	29	0.00028	0.031	15.2	0.2	2	23	809	830	808	830	0.97
13	29	2.8e-06	0.00031	21.5	1.9	1	23	836	858	836	858	0.98
14	29	8.7e-05	0.0097	16.8	4.4	1	23	864	886	864	886	0.98
15	29	0.0045	0.5	11.4	0.8	1	23	892	914	892	914	0.98
16	29	0.00015	0.017	16.1	1.5	1	23	920	942	920	942	0.95
17	29	0.00034	0.038	15.0	3.4	1	23	948	970	948	970	0.97
18	29	0.011	1.2	10.3	1.5	2	23	977	998	977	998	0.98
19	29	3.5e-06	0.00038	21.2	0.8	1	23	1032	1054	1032	1054	0.98
20	29	3e-06	0.00034	21.4	2.8	1	23	1060	1084	1060	1084	0.94
21	29	0.00079	0.088	13.8	0.6	1	23	1116	1138	1116	1138	0.97
22	29	0.0013	0.14	13.2	3.1	1	23	1144	1166	1144	1166	0.97
23	29	0.00013	0.015	16.3	1.6	1	23	1170	1192	1170	1192	0.97
24	29	6.4e-05	0.0071	17.2	1.8	1	23	1198	1220	1198	1220	0.98
25	29	7.1e-05	0.0079	17.1	0.8	1	23	1251	1273	1251	1273	0.97
26	29	0.026	2.9	9.0	8.3	1	23	1307	1329	1307	1329	0.97
27	29	4.6e-05	0.0052	17.7	0.1	1	23	1335	1357	1335	1357	0.98
28	29	0.0077	0.86	10.7	6.6	1	23	1556	1578	1556	1578	0.97
29	29	0.22	25	6.1	0.8	1	23	1584	1606	1584	1606	0.92

Sequence Information

Coding Sequence: ATGACATTCGAAAGTGAAACACCGAATTATCGCATAGCGACAGTTCTTGCTCCACCTTTTGTTATGTATGAAAATGTCACTGACACTTACTCCGGCTACTGTATTGACCTCCTCCACGAGATCCAAACTGAGATGAACTTCACCTACGACATGTACCAGGTGGAGGATGGTTACTATGGTCACATGGATGATGATGGCAACTGGAGTGGCATGGTCAAAGATCTGCTGGACGACAAAGCAGACATAGCAATGAGCAGCATCGCCGTGATGGCAGAACGAGAATTTGTTATCGACTACACGGTCCCAATTTTTGGTTCTGTTGGATTTTCCATCCTGATGCTCAAACCCAAGCAGCCTGGCtcgtttttcaaattcgtaACAGTCTTAGAGGGTGACGTCTGGTTGGGCGTCATTGCAGCTTACGTCTGCACGAGTATTCTGCTTTGTGTGTTGGATAGATGGTCACCGTACAGCTACCGCAACTACCAACACCAGGACGACGATGAGAAGAGGGTGTTCACGTTGAAGGaaagtttttggttttgtcTGACATCCTTGACGCCTCAGGGGTGTGGAGGAACACCGAAAAACTTGTCCGGCAGAGTTGTTGCTGCTACTTGGTGGCTCTTTGGGTTCATCATCTTAGCTTCTTATACGGCTAATTTGGCAGCTTTTTTAACTGTTTCCAGACTGCATGCCCAGGTCACATCACTGGACGAGTTGAGCAACCAACATACAATCCAGTATTCCGCCTGGACAGACTCGTCTGCTATGCGATATTTTGAAAGGTTGTCGAATATTGAGCGAATATTTTATGAAACTTGGAAAAATATGACTCTGATTGAAGAGCTGTCAGATTTGGATCGTTCTAAATTGTCCGTGTGGGATTATCCACTGAGCGATAAATATACACGAATTTTAGacgcaataaaatattataaaccgCCTAGTGATTATGAGCAATCAATTGATAGAGTTTTAAATGGTAAAGCTCCGTTTGCACTGATAGACGAGAGTGCTCGACTCAAATATACGGCTTTGACGAATTGCGATCTGATGATAGTCGGGAAAGAATTTTCTATGAAACCTTATGCATTCATGATGCAAAAGGAATCCCCATTGAAGGAACCATTTAATAAAGCaatattagCCCTGACGTATCGCAGAAGACTCgaacaattgaaagaaaaatggtgGGATGACAATGAGAAATGCGATCAAGAGGACATTCTCAgcggtgaaataaaaattgatagcaTAGGAGGTTCTTTCCTTGTGATTTGTATAGGAATGTTGTTGGCTTACCTTGTATTGTTTATtgagcattatttttttcgtaacCAAGAAGGCAGACGAATCTACCAGTGTTATATTTGCCACCAATTATTTCGCAGTCAGGCTCGGTTGAACTGTCACGAATTGTCTCACAGAGTAGCAAAAAGGTACAAATGTAAAGTGTGCGGCAAGAAATTCGACTATCCAAGTTTCATGAAACGGCACATGTTGACTCACACCGGTGAAAAACCGTTCCTTTGCCAATATTGCGGTGGCGGTTATGCTACTAAAAGTAATTTAGAAATCCATGAGAGAATTCATACTGGTGAAAAACCGTTCCTATGCACAACATGCGGTAAACATTTCATCAGTTTAGCCATGCGGATACGGCATATAAAAATTCACACAGGTGAAAAACCGTACAAATGCGATGAATGCGGCCGAAGATTCATCACCTCGGATTCTCTGCGACGGCACATACTGGTTCACACGGGTGAGAAACCGTTCCCTTGTcaattttgtgaaatgaaattcgctACCAAAGGTCAATTAATTCACCATATGAGACACCACACCGGTGAACGACCGTTCGATTGTCCGCATTGCGATAAAAGTTACCCTCTCAAAGCATCTTTAAAGTATCACCTTGCAGCTCACGAAAGGGAGAAGAATCTATACATTTGTCAATATTGCAATGTACGCTTTCGTACTGCAGATCACTTAAAAATTCATGAGGAAACTCATGTTAAGGAACAACTGCAAGTATGTCAACAGTGCGGTGAAATATGCACGGATAAAGATTCACTGAAAGAGCACATGAAGACTCACGAAGATGAAGACAAGCCCAATTGTGGAATTTGCAACGAAAAGTTTGATACTGAAGCGGATTTGAATAACCATGTGCAAATTCACAAGAAACCCTATATTTGCCACTATTGCGAAAAAGGTTTCAGTACAAAAACTAGTTTATCCATTCACATTGAATCTCACATAGATCAGACAATCAACGAAGACGTTGGTCAACGAAACGACGAAAGTGTTCCTAGCACAAGTCAATTTAAAAAGCCAAAGAGAACTCGCGTACATCAGTCATCGCCCGTTTCTCAAGTGAAAAGGCGAAAGAGAACTTACATCCCTAAAAAAACACAAGAATGTATGTACTGCGGTAAAAAATTCGCCGGCAGATATGCAGTGGTTGTACATCAGAGAACTCACACAGGTGAAAAACCGTTCCGTTGTGAAATTTGCGAAAAAAGGTTTAGAACCAGTACTCAATTACGATATCATGTGAGAATTCACGTTGGTGGAAAACCATACTACTGCACTGAGTGCCACAAAAGATTCTCTACCCTCACGTCGATAAAGCGGCACGTAATGACTCACACAGGTCAAAAACCCTTCGAATGTCGATATTGCAGTAAAAGGAGCATTACCAGAGGTCAAATGAATATCCATGAGAGGATTCACACAGGTCTGAAACCGTTCCTTTGTACAATGTGCGGTAAAACTTATGGTACTAAAACTCGTTTAACAAACCATGTAAGGAGTCACACAGGCGAAAAACCGTTCGCTTGTCCGCATTGCGAAAAAAGATTCGGTGTCAGATGTTATTTAAGAGCACACATGAAATTGCATACACGTAGCAAACGGCCCACTTGTCAACATTgcggtatatatttttattccgaCAGAGCATTAGATAACCATTTAAAAACTCACgccaatgaaaaagaagaagcatGTATACAATGCGGCGAAGAAATCTTAGGCAAATTTGCAATGAAACAGCATATGAAGATTCACAGAGTTAAAGTAGTGTACATTTGTCAACATTGTGATAAAAGGTTTCCTACCAACTGGGCCTTAGAAACCCATATGGTAACTCACACAGGTGAGAAACCATTCAAGTGTAACGTTTGTGATCATGTTTTTTCCACAAAAGGTAATTTAACCGCGCACCGTAAAACTTTCAATCATAAAGAATCTGACCCGTTTCAAGAAATCGAAGAAATGGACCCTATCGTGAAACAAATTACAgagaatataataattcacATCGAAGGAAAACGATACGAATGTAAATACTGTAACAAGGAATTTCCAAACATAACAAGGATGAAACGGCACGTGGCGATTCACATTGACGAGAAATTGcacgtttgttcattttgcaagAGAGGTTTTAATTCCAGAAGCAATATGCTTTTACATGTGAAGACTCACACAAAATCGTTCGTTTGTACcatttgcaataaaaagttttctgtTCAAAAAACCTTCGATAACCATATGGAAAATCACAAAGAGCCAAAACAGTTCCCTTGTCATTTATGCAGTAGAATCTTTACTTCACAACGTGGTTTAACCGTACACCTTAAGTCTCACAAAAATCAGGAATCGTCCACTTCTCAACAGAGCGATGGAAGTGTTGCTAGTACGAGTCAGTTGAACAAGTCCATAGATAAGATACTAGCGTTCCCTTGTCCTAAATGCGATAAATTTTTCGCTTCGAAAAGGAGTGTAGCCATGCACatgaaatttcacaaaaataaggAAAGGACCGCTTCTCAACATAGAGATGAAAGTGTTGCTAGTACAAGTCAGTTGAATAAGTACAAGAAAACTCACACCGCAagcaaaaaatacaaatgtaaatactGCGACAAAAGTTACAACCACTTAAATATACTACATCACCACATGATGAATCACGTAGGTGAGGAACTCTACGTTTGTAAGGTTTGCGGTGCAGATTACAGTTCAAGAAGTGCACTCGAAATTCACCTTCAATCTCACCCAGATGAGATGCTCAAAGCTTatcgaaaaaagaatgaaagtgGTGCTAGCACAAGTCAATTAAAGAAGCCTGAAGAAACTCGCACAGATCAGAAATCGCCCGATAGTCAACGTAGTGATGAAAGTGTTAATAGCGCAAGTCAATTAAGGAACTCTGAAGTAATCCATAAATATCGAACATGCTTCGTCTGTCAAAAGAGCGAAAGAAATGTTGTTAGCCCAAGTCAATTATTAACGCCTAAGGAATATACAGACCAGTCATCAGAAAGTTGTCAACAAAGCAATGAAAGTGGTGGTAGCACGAAACAATCAAGTAAGTCTGCGAGAACTAATATACATCGATCATGCGTCCTTTGTCAAGAAATCGATGAAGAATTTACTAGCATGGGTCAATCAAATGAGCCTCAAGAAACTCATCCGGACCAAACATCGCCTGGTTGTCAACATAGCCATGGAAGTGTTGCTAGTACAAGTCAATTAAAGAAGCCTGAACAAACTCATACAGACCAGTCATCGGACGTTTGTCAAAAAAGCGCTGATACCGTTGATGGTGAATTGAAGAAGCCTCAGGAAACTAACATCAGAagcaaaaaatacaaatgtaaatactGCGACAAACGATACAACCGCATAAATATACTGCATCACCACATGATGACTCACATAGGTGAGAAACTCTACGTTTGTAAAGTTTGCGGTGAAGATTACAATTCAAGACGTGCATGCGAAATTCACACTGATTCTCACTCAGATGGGAAACTCAACGATTCTGGACGAACCGATGAAAGTGTTACTGGCACAAGTCAATTAAAGAAGCCTGAACAAACTCATACAGACCAGTCATCAGACGTTTGTCAACGAAGCGGTGAAAGTGTTACTGGCACAAGTCAATTAAAGAAGCCTGAACAAACTCATACAGACCAGTCATCAGACGTTTGTCAACGAAGCGGTAAAAGTGTTACTGGCACAAGTCAATTGAAGAAACCTGAAGTAATCCATACATATAATAAGTGCTCCGTTTGTCAacgtattgaaaaaaatctgccTAGCACAAGTCAATTCAAGAAGCCTGAGGAAAATCGCACAAATAGGAAATCGTCCGTTGATCAACAAACCAACGAAAGTGTCCCTAGTACAAGTCAATTAAATGAACCTAAAGAAACTCATGCGGAACAAACATCGCCCGTTTGTAAACGTAGCAATGAAAGTGACGCTAGCACGAGTGAATCAAGCGACCCTGAGAGACTTCAAATAGTTCTGTCATCGCCCgttgatgaacaaaatgacGAAAGTGTCCCTA
Protein Sequence: MTFESETPNYRIATVLAPPFVMYENVTDTYSGYCIDLLHEIQTEMNFTYDMYQVEDGYYGHMDDDGNWSGMVKDLLDDKADIAMSSIAVMAEREFVIDYTVPIFGSVGFSILMLKPKQPGSFFKFVTVLEGDVWLGVIAAYVCTSILLCVLDRWSPYSYRNYQHQDDDEKRVFTLKESFWFCLTSLTPQGCGGTPKNLSGRVVAATWWLFGFIILASYTANLAAFLTVSRLHAQVTSLDELSNQHTIQYSAWTDSSAMRYFERLSNIERIFYETWKNMTLIEELSDLDRSKLSVWDYPLSDKYTRILDAIKYYKPPSDYEQSIDRVLNGKAPFALIDESARLKYTALTNCDLMIVGKEFSMKPYAFMMQKESPLKEPFNKAILALTYRRRLEQLKEKWWDDNEKCDQEDILSGEIKIDSIGGSFLVICIGMLLAYLVLFIEHYFFRNQEGRRIYQCYICHQLFRSQARLNCHELSHRVAKRYKCKVCGKKFDYPSFMKRHMLTHTGEKPFLCQYCGGGYATKSNLEIHERIHTGEKPFLCTTCGKHFISLAMRIRHIKIHTGEKPYKCDECGRRFITSDSLRRHILVHTGEKPFPCQFCEMKFATKGQLIHHMRHHTGERPFDCPHCDKSYPLKASLKYHLAAHEREKNLYICQYCNVRFRTADHLKIHEETHVKEQLQVCQQCGEICTDKDSLKEHMKTHEDEDKPNCGICNEKFDTEADLNNHVQIHKKPYICHYCEKGFSTKTSLSIHIESHIDQTINEDVGQRNDESVPSTSQFKKPKRTRVHQSSPVSQVKRRKRTYIPKKTQECMYCGKKFAGRYAVVVHQRTHTGEKPFRCEICEKRFRTSTQLRYHVRIHVGGKPYYCTECHKRFSTLTSIKRHVMTHTGQKPFECRYCSKRSITRGQMNIHERIHTGLKPFLCTMCGKTYGTKTRLTNHVRSHTGEKPFACPHCEKRFGVRCYLRAHMKLHTRSKRPTCQHCGIYFYSDRALDNHLKTHANEKEEACIQCGEEILGKFAMKQHMKIHRVKVVYICQHCDKRFPTNWALETHMVTHTGEKPFKCNVCDHVFSTKGNLTAHRKTFNHKESDPFQEIEEMDPIVKQITENIIIHIEGKRYECKYCNKEFPNITRMKRHVAIHIDEKLHVCSFCKRGFNSRSNMLLHVKTHTKSFVCTICNKKFSVQKTFDNHMENHKEPKQFPCHLCSRIFTSQRGLTVHLKSHKNQESSTSQQSDGSVASTSQLNKSIDKILAFPCPKCDKFFASKRSVAMHMKFHKNKERTASQHRDESVASTSQLNKYKKTHTASKKYKCKYCDKSYNHLNILHHHMMNHVGEELYVCKVCGADYSSRSALEIHLQSHPDEMLKAYRKKNESGASTSQLKKPEETRTDQKSPDSQRSDESVNSASQLRNSEVIHKYRTCFVCQKSERNVVSPSQLLTPKEYTDQSSESCQQSNESGGSTKQSSKSARTNIHRSCVLCQEIDEEFTSMGQSNEPQETHPDQTSPGCQHSHGSVASTSQLKKPEQTHTDQSSDVCQKSADTVDGELKKPQETNIRSKKYKCKYCDKRYNRINILHHHMMTHIGEKLYVCKVCGEDYNSRRACEIHTDSHSDGKLNDSGRTDESVTGTSQLKKPEQTHTDQSSDVCQRSGESVTGTSQLKKPEQTHTDQSSDVCQRSGKSVTGTSQLKKPEVIHTYNKCSVCQRIEKNLPSTSQFKKPEENRTNRKSSVDQQTNESVPSTSQLNEPKETHAEQTSPVCKRSNESDASTSESSDPERLQIVLSSPVDEQNDESVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -