Tbro013257.1
Basic Information
- Insect
- Trissolcus brochymenae
- Gene Symbol
- wek
- Assembly
- GCA_030523145.1
- Location
- JAQQRF010000908.1:5267-8554[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.027 57 4.4 0.0 17 26 31 40 23 43 0.85 2 12 3.4 7.2e+03 -2.4 0.2 18 23 128 133 125 136 0.82 3 12 0.065 1.4e+02 3.1 0.5 12 23 395 406 387 407 0.87 4 12 0.7 1.5e+03 -0.2 0.3 6 25 418 435 413 438 0.76 5 12 2.2 4.7e+03 -1.8 0.3 16 29 459 472 453 478 0.80 6 12 7.2 1.6e+04 -3.4 7.5 4 41 475 511 472 513 0.70 7 12 0.092 2e+02 2.6 1.9 11 26 549 564 539 579 0.83 8 12 0.00074 1.6 9.3 0.8 14 30 648 664 642 670 0.82 9 12 0.19 4e+02 1.6 0.4 13 26 675 688 664 691 0.75 10 12 3.6e-08 7.8e-05 23.1 3.0 4 44 695 737 693 737 0.89 11 12 0.017 35 5.0 1.1 13 29 732 748 727 758 0.80 12 12 9.5 2e+04 -3.8 0.2 18 24 765 771 764 775 0.77
Sequence Information
- Coding Sequence
- ATGGATGTAGACAATGACACGAGTCTTGTTGGATGccaaaataatgaacaagAGTTGGAAACATTGGAAAGTTGGAGTGACGGCAGTGGTGTCATTTGTAGATTGTGCGGCAAGAAGACTGACAATTACGTaccaatttttggaaaaaattatgttgcTGAAAAAATTAGCAGATGTTTACCGattaaaGTCGAGTCGGAAGACGAATTACCATCCAACATCTGTAAACGTTGTTTCCATTGTCTCAACATAAGTTACAAACTTGTAACAAGCTGTATCAAAGTGGACAACTTACTTAGAGAAAAATTGGGCAacgacaagaaaaataaattcaagtcCGAGAGTTTGAAAACTGCTGAAGAAGAACTGCAGGGTCCTTTGGTGTGCAACAAGtgcaatataatattttttgacgtCGTGTCGTTTGAAACTCATGTCAACAAGATTCATTTAGTAAATGATGATAATGGTGACGATGACAACAACGGCGACACAGAATTGGCAAAtgcgaaaaatttgaaacaaattgaaaatttgattgctgtaaaaaaagaaaaaaactcgCAAGCAAAATCTGTGCCAAACATAATTCGTTCGCGTAACGCTCTGAAACATCAAAagcaaataacaataacaaacgaaGTGAAAGCGACAACTTTAAACTTGTCTCAGAAGCTTTTCGTTCCTATTGAATCCCGAGTGAAACTTGTGCCCATTGGTAAGATTGTATCCCAACCATCCGTAACATCCAATCGAAATGTTAAGATCTTgcctaaaaatgttttcggtCAGGCTATTAAAATCTTGCCAGATACCGTGCAACAACACCCCATTCAAATTTTCCCGAACGCCATATTACCCAACATGATGTCAGCTTCTAATCAGCAAGCGATCAAAATCATTGCGACACCGTTTGGGACCAACAACTCGTCGTCGTCGCCGTTGTCATCCTCAGGCACTCTCCAGCTGATTCCTACAGATGTTGCGATCCCGATGAATGCAAAAGTAGCCATCCCCAGGATGTCAGTTGTCCAGCCGAAAAGTAGTCGTCGTGTTGTTGTGAAAGTCAAGAAACAAGATACacgacaaattgaaaaaagagatCACAATTacacaacaacaaacaatgaCAATGACTCGGATGAGTTGCCTTTGCAAGATGCGCCGACTGCCTATAGGTCGGTTTGCCATTACAATGTTCAGTGCAAAATATGCGGCATTGGAGTAGAAGATGATGACCTTCTATTGGCTcacaataaaattcatcaaccACAAAAGATGGGCTGCAAAGTTTGCCACCAAGAGTGTGACTCTTTGTATGATTTATACATGCACAAGAAGAGGAAACACAATGTCTACAAAAGGGTGTCTTTGAAGTTTTCTTGTGAGCAGTGCGGTAAATTTTTTACCAACAGCTGGCAGTGGGAACATCACGAGGAACACAAGTGCAAGAAGAAATTTCCAATGTATCCCTGCAAATATTGTAATTTGGGATTCACAACGAATCTTAAATTAAGACGACATCTCAGGaaacacaaaaaagaaatgttggcGGATCCAGAGGTTGAAGTTTTCAAGTGCATCGGGTGTCCAAAAGTGTTTGTAGACGAAGAGTTTTATCAAAAGCACAGAAACgtaCACGATCCAGAGTGTTGGGATAAATACAAATGTGGCATTTGCAATCGTTCATTTCGTGACAATGTAAGACTGAAGGAGCATCACCAATCCATTCATGAGGGCATCAAACCACATCAATGTGATGTTTGTGGACGAACGTTTCATCGCAGATCAAATATGAAAGTACACAGAGACAAACATTTTGCCCGTAAATGTGAGCATTGCAGCGAAGGCTTTTTGAAACTGAGCGAATTGATTGCACATATCAAGCAAGTTCACAAGCTGGAACCAGATAGAAAACTACTGGCAAAGAAGCAGTGCAAGAGTGGATACTACGTTTGCAGATTTTGtggcaaaaaattgtctacgCATCAGTCAGTTCTAGATCACGAACGCATTCACACAGGGGAAAAGCCACACGAGTGTAAAACATGTGGAAAGACATTCCGAACTTATACAGCTAGGTGGGCTCATGTGCAAAGGCATAAAAAAGGTAGTTTTACCTGTGAACATTGTGGCAAAGTTTTcagTTACAAACAGAATTTGTTGACTCATATACTGATTCACATGCCCGTCGAGGAAAGAAAGCatcaatgtttaaaatgtGGCAAAAAATTCTTAAGAAAAGGTCACTTGAACATTCATATGAGAATTCATAATGGCGAGCGACCCTACACGTGTGACATCTGTAACTACAGTTTCACGCAGATGGGTGACATGAAAAGGCACAAAGCCAGACATTCCAATAGTCATCATGTAAAATCTAGGAAAAGTCGCATCAAGATTATAAGCAATAATAGTCAAGAATATATGCAGCAGATTGAAAATCCAGAAATGCTGTGCGAAGAGATGGAACAGGTTAAAGATACCCAAGAGATAAATGCGATACATCAACTACAACAACAGGTTCACGTCAGTGAAACTGTTGGGTTCATTCAAGGTGAAGATGGTGATGATAGTAATGTAATACACCAGGTCGATGAAATTCAAGAGATGAATAGTGACTTGGAAtaccaaattaatttcatcatgaATCAAGGAGAACCAGTTGAAGAAGTTATCATTCATGAAAAAGATTGTTAA
- Protein Sequence
- MDVDNDTSLVGCQNNEQELETLESWSDGSGVICRLCGKKTDNYVPIFGKNYVAEKISRCLPIKVESEDELPSNICKRCFHCLNISYKLVTSCIKVDNLLREKLGNDKKNKFKSESLKTAEEELQGPLVCNKCNIIFFDVVSFETHVNKIHLVNDDNGDDDNNGDTELANAKNLKQIENLIAVKKEKNSQAKSVPNIIRSRNALKHQKQITITNEVKATTLNLSQKLFVPIESRVKLVPIGKIVSQPSVTSNRNVKILPKNVFGQAIKILPDTVQQHPIQIFPNAILPNMMSASNQQAIKIIATPFGTNNSSSSPLSSSGTLQLIPTDVAIPMNAKVAIPRMSVVQPKSSRRVVVKVKKQDTRQIEKRDHNYTTTNNDNDSDELPLQDAPTAYRSVCHYNVQCKICGIGVEDDDLLLAHNKIHQPQKMGCKVCHQECDSLYDLYMHKKRKHNVYKRVSLKFSCEQCGKFFTNSWQWEHHEEHKCKKKFPMYPCKYCNLGFTTNLKLRRHLRKHKKEMLADPEVEVFKCIGCPKVFVDEEFYQKHRNVHDPECWDKYKCGICNRSFRDNVRLKEHHQSIHEGIKPHQCDVCGRTFHRRSNMKVHRDKHFARKCEHCSEGFLKLSELIAHIKQVHKLEPDRKLLAKKQCKSGYYVCRFCGKKLSTHQSVLDHERIHTGEKPHECKTCGKTFRTYTARWAHVQRHKKGSFTCEHCGKVFSYKQNLLTHILIHMPVEERKHQCLKCGKKFLRKGHLNIHMRIHNGERPYTCDICNYSFTQMGDMKRHKARHSNSHHVKSRKSRIKIISNNSQEYMQQIENPEMLCEEMEQVKDTQEINAIHQLQQQVHVSETVGFIQGEDGDDSNVIHQVDEIQEMNSDLEYQINFIMNQGEPVEEVIIHEKDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01493757;
- 90% Identity
- iTF_01493077;
- 80% Identity
- iTF_01493077;