Basic Information

Gene Symbol
dnajc2
Assembly
GCA_030523145.1
Location
JAQQRF010000060.1:54438-57042[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.6 1.1e+04 -2.8 0.1 30 46 94 110 92 110 0.81
2 3 6.2e-06 0.0069 17.0 0.0 2 31 440 473 439 491 0.86
3 3 1.3e-13 1.5e-10 41.5 0.1 3 44 565 610 563 612 0.91

Sequence Information

Coding Sequence
ATGGCCAAGTCCGTACCAGCTGATTTGATCGTCTCAAAATCGACAAATTcTCTCgcacaacaaaaatcgtcGGAATCGAGAGCTGTAGTTTTGTATGTATCGCAAGAAGATTGGATCAAGTCGGTGTTGGAACGTGCCAATCAGAAGGAGAGCGATGTTTTTTCTGACGACGACGAGATCACTGATTATCCGTTCGAAGATGATTTGGAATTTTTGCGATCCTTGGATCCAAAGCAGTGGAAGGATCAGGACCATTATGCTGTTCTAGGGATCAAAAATCTTAGAAATAGAGCTACCGAAGATATAATCAAACGAGCTTacAAACACAAAATACTCAAACACCATCCTGACAAACGAAAAGCACAAGGAGAGGAGATCAGAGCTGACGATGACTACTTTACGTGTATCACCAAAGCGTGGGAAACACTCGGCAATCCAATTAAGCGAAGAAGCTATGACAGTATTGATCCTTACTTCAATGACGAATTACCTGAGGAAAAGGAAGTGaaggaaaacttttattatgtCTTGGGAAAGGCGTTTCGCGAGAACGCTCGTTGGTCGTGCAAGAAACCTGTGCCTAAGCTTGGCCATCCCAGCACTCCAAGAGAAAAGGTTGAAAAGTTTTACTCCTTTTGGTATGACTTTGAATCCTGGCGGGAATATTCTTACCTGGATGAAGGCGACAAAGAAAGTGGCCAGGACCGAGAGGAAAGGAAATACAtagagaaacaaaacaaagtaatCAGAGCGAAGCGTAAAAAAGAGGAGATGTCACGTATCCGCAGCTTAGTTGACATGGCTTATAATTTGGATCCGAGAATTAAAAAGTTCCAGTTGGAAGACAAGGAGAGGAAAACTGCCATGAAGCGAGCGAAGCAGGAGGCAATGAGGGCGAAACAGATGGAGGAAGAGAGGTTGGCACGCGAAGCTCAAGAGAAAGAGAAGTTGGAGAAAGAGAGGCAAGATGCGGAGGAAAAGGCGAGGCTGGACGCTATCAAGCAGGAGAGGGAAGCTCGGAAGAAAGCTTTGCGCAAAGAGAAAAAAGCTCTGAGAGACTTTTGTAAGTCGCAAAACTACTTTGCTTCCAATCCTGAAGAAAGTATTAGACATATGGAAGGTGTTGAGAagATCTGTGAGTCATTTGAAGTGGCTCAGTTAGAAGAAGCGATGAAACGCCTAAAAGTGGACGGTAAAGATGCTTTTCTTAGTCTCGTCGAAGagacagagaaaaaaattgaagaagaacGTAGAGCAGCgagaattatttcaaacgaatCTCGGTCGAGTGGGGAAAAGTTTACCAAGTCTTATCATACTCCATGGACTGAAAATGAGCTTCAACTTCTTATTAAGGCTGTCAACTTATTCCCAGCTGGAACAAACCAACGATGGGAGGTTGTCGCAAATTTCATCAACCAACACAACAACAGCAACGATTCAAGTCACCTAAAACGCAATGCCAAGGAAGTTTTAGCAAAGGCCAAGGAACTGCAGTCAAATGATTTCAGCAAGTCATCGATGAAGGAAAGGGCTAATAAAAAAGCGTACGATAATTTTATCGCGGAGAACAAGGCTAAAGATAAGTTGGAAGAACTGATGCCGTCCGAAACAACTAAAAGGTTGGATCACCCCGTCAGGAATGGCGAACCATCTGAAGCTAAAGAAACtgctaaaaaagaaatctccGCTCCTTGGACGCCtgctgaacaaaaattattagaacAGGCTTTGAAAACTTATTCGACTAGTGTTCCAGATAGATGGGATAAAATTGCTGAATGCATTCCaacgagaacaaaaaaggaGTGCATGAAGCGATATAAGGAATTGGTTGAGCTCGTGAAGGCGAAAAAAGCAGCTCAACAAGGACTAAAGCAGTAG
Protein Sequence
MAKSVPADLIVSKSTNSLAQQKSSESRAVVLYVSQEDWIKSVLERANQKESDVFSDDDEITDYPFEDDLEFLRSLDPKQWKDQDHYAVLGIKNLRNRATEDIIKRAYKHKILKHHPDKRKAQGEEIRADDDYFTCITKAWETLGNPIKRRSYDSIDPYFNDELPEEKEVKENFYYVLGKAFRENARWSCKKPVPKLGHPSTPREKVEKFYSFWYDFESWREYSYLDEGDKESGQDREERKYIEKQNKVIRAKRKKEEMSRIRSLVDMAYNLDPRIKKFQLEDKERKTAMKRAKQEAMRAKQMEEERLAREAQEKEKLEKERQDAEEKARLDAIKQEREARKKALRKEKKALRDFCKSQNYFASNPEESIRHMEGVEKICESFEVAQLEEAMKRLKVDGKDAFLSLVEETEKKIEEERRAARIISNESRSSGEKFTKSYHTPWTENELQLLIKAVNLFPAGTNQRWEVVANFINQHNNSNDSSHLKRNAKEVLAKAKELQSNDFSKSSMKERANKKAYDNFIAENKAKDKLEELMPSETTKRLDHPVRNGEPSEAKETAKKEISAPWTPAEQKLLEQALKTYSTSVPDRWDKIAECIPTRTKKECMKRYKELVELVKAKKAAQQGLKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01493514;
90% Identity
iTF_01493514;
80% Identity
-