Tbro002045.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trissolcus brochymenae
Gene Symbol
-
Assembly
GCA_030523145.1
Location
JAQQRF010000051.1:21949-24791[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.8e-16 1.1e-12 48.0 0.0 1 43 18 60 18 62 0.94

Sequence Information

Coding Sequence
aTGCCAAAGAAGTACGTCAGACGCACAACAACCTCAGACCGAGGACAATGGACCGAGGAAATTTTGAAGGACGCGCTGAATGCAATAGAGTCAGGAGCCATGGGGGTGAACCAGGCAGCCAAACACTTTGGTATTCCTGCTCGAACTTTGCGTCGTCGTAAAAAGCGTGGCCAGTTTCGTAAACTCTCCCTCGGATTTCCTGGAGTATTCAGTCCGCAAAACGAGCAGCTGTTTGTGCGGCACATCCAACGGCTGTTAAACGAACGGTACCTGGTGAACCGTCAGGCGGTGCGCAGCATGGCTTATCGTTTCGCCGAGGACCTCAATCTCACCCACAGGTTCAACCGGACCACGAAAACAGCGGGGTTCGATTGGCTCAATATGTTCCTGAAACGAAACAAGGACCTCCAGCTGATCTCCGGGTCCCTCCAGGAGCCCCTGCCCGAGGACCTTTTCGACTTCAAAAAAACCGAGACCGAGGGTGCCACCGGCAACAAGCAGTCAGTCGACGTCCTCTCGCGAATCTACGAGCAGCACAACCTGGCCACTGACCCTGAAAAGATGTTTATCTTTGGCGAGGTCAACTTCTCCCAGCCTGAGGAAGACGGTTTCACAATCTTAGCCTGTTACAACGGTGCGGGCAAGTTCCTGCCACCTGTCATCATTTTTCAGGGCGTAAAATTGTCGAAAGAGATGTATGATGAGATCCCCCGAGGTGGCGACATCTTTTTGAACAACGATTCAAGTTCGTTGAACTCCCAGTTGTTACAGGAATGGATGAAGACCTATTTCGTCCCGAACAAACCCCAGGGAAAGGTTTTGATATTCTTTGAGGGACATCCGGCCTACCTGGACTGTCGCGATCTGCTCCAACTTGCTGATAAGAGTGAGACGGTTCTGATAAGCTTCCAGATCTTGACGAGACATTTTATCAAACCGCTCAGGGACTTTTATGTCGAAGAGAGGACGAGCTTGATGGAACAATGTGGGGGCAAGGCTATTTCGAAATTGCAGATCTGCTCGATCGTTAAGAAAGCTTGGGCCAGGGTGGCTACGACAGAAACAGCTCATAGGGAATTCAGGGAGTTTGGCATTTTTCCTCTGGATAGTTCGATGCTCCCTGACCGGtgttatgaaattgttcatttaaaagttGGTGGAAACAAGAGGGAACATTCCGATGAATCGtcGATAGAGGAAGTAGAGATCGATGACTcggacgaaaaagaaaaacctgaAGAGACGGTGGTGAAGGTGGAAATTGAAGATTTTCAAGACCTGGCTCAGGTGGAGATCAAACAGGAACTGCCAGAAGAAATGACGACTGATGAGCAGATCAGAAACAATTGTTCGATGTTTGCCACCGAGCCGATTTTTGAATCCGTACTGATGAAACACGatgtgttgaaaaatgaatcctATGAGCCCCATAGTGAACCTCTGCAAGAGCTGGATGATGATGACGACTATGATTCGAATGATGAGGTCGATATGGCTTCGTCCAGGTTGTATCTAGAGCCTTCCTTCTACGGTGACAGGGACGTCAGTGATGAGGTTTGTCAGACCCCACCGTTCTGGAACCAATTGAGCATCAATGGTGATGCtagaaaaagtaaaacgaaAGCCACGCAGACGTTCAACGCACCAACGCAAGTTTACAAGAAGTGTTACATCCCGGGCTGTGACAACACTTCGCATGATATCACGAAAGTATTCGTCAAGGTGCAACTCAACAATATCATTTACAAAAGGTGGGCACAAAAGTTTGGCCCTGAAGTATTTCAGTCTCCTTACGTCCTGTGCGGAAACCATTTCGATttAGCAAGAGACACTTGGACAGATGAATCGTatggaaaaatgaatgtaCATCTCAAGGCAGACGCTCTTCCGGTTCGCAGAACATCGAGATCGGAACCGACCAAAATCTTACGAGCAAATACCAAATTCGGACCGCTTTTGTGCATCCGTCCAAAAACAAACGTTGTCATAGAAAAAGATAATCGTGTAACAGTTAAATCTGAAGGTTATACGGTCGACGACAAGTACGTGCGCGACGCAGAAGTGCAGTGTTCATTTAAGATAAACGGCTTGGACAAGGCAACGCAGATCGACATCACTGCCGATTCAGTTATGAAATTGTTCTACTGTAGTCTGCCTGGTTGTCCCAGCACGAGCGCCGATTTGCCTAAAAAGTTATTCTTCTCGGTCCCAGAAGATGAGCGGTTGATGACACAATGGTCCAGAAGTTTGGGCGTGAGCACACAAAGGTGGATGATGTCCCACTCACCTACTGTACACTGCTGCGAGGAccattttaatGAGCTAGACAAAGTTGACGACTGGGCAAGGTACAAACAAGGAGGCTGCAAAGTAACCGTCGACCTGAACCAGCATCGTGAAAAAAAGACGAGATCAAAACCCACAAAACGTATGAAACCAAGCTGA
Protein Sequence
MPKKYVRRTTTSDRGQWTEEILKDALNAIESGAMGVNQAAKHFGIPARTLRRRKKRGQFRKLSLGFPGVFSPQNEQLFVRHIQRLLNERYLVNRQAVRSMAYRFAEDLNLTHRFNRTTKTAGFDWLNMFLKRNKDLQLISGSLQEPLPEDLFDFKKTETEGATGNKQSVDVLSRIYEQHNLATDPEKMFIFGEVNFSQPEEDGFTILACYNGAGKFLPPVIIFQGVKLSKEMYDEIPRGGDIFLNNDSSSLNSQLLQEWMKTYFVPNKPQGKVLIFFEGHPAYLDCRDLLQLADKSETVLISFQILTRHFIKPLRDFYVEERTSLMEQCGGKAISKLQICSIVKKAWARVATTETAHREFREFGIFPLDSSMLPDRCYEIVHLKVGGNKREHSDESSIEEVEIDDSDEKEKPEETVVKVEIEDFQDLAQVEIKQELPEEMTTDEQIRNNCSMFATEPIFESVLMKHDVLKNESYEPHSEPLQELDDDDDYDSNDEVDMASSRLYLEPSFYGDRDVSDEVCQTPPFWNQLSINGDARKSKTKATQTFNAPTQVYKKCYIPGCDNTSHDITKVFVKVQLNNIIYKRWAQKFGPEVFQSPYVLCGNHFDLARDTWTDESYGKMNVHLKADALPVRRTSRSEPTKILRANTKFGPLLCIRPKTNVVIEKDNRVTVKSEGYTVDDKYVRDAEVQCSFKINGLDKATQIDITADSVMKLFYCSLPGCPSTSADLPKKLFFSVPEDERLMTQWSRSLGVSTQRWMMSHSPTVHCCEDHFNELDKVDDWARYKQGGCKVTVDLNQHREKKTRSKPTKRMKPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01492934; iTF_01493632; iTF_01493499;
90% Identity
iTF_01493632;
80% Identity
iTF_01492934;