Basic Information

Gene Symbol
zfy1
Assembly
GCA_947095525.1
Location
OX352754.1:1830296-1848086[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.0002 0.015 16.2 0.8 1 23 573 595 573 595 0.97
2 7 0.017 1.2 10.2 0.2 1 23 610 633 610 633 0.96
3 7 0.0028 0.21 12.6 2.8 2 23 644 665 643 665 0.97
4 7 0.00045 0.033 15.1 1.2 1 23 671 693 671 693 0.95
5 7 4.3e-05 0.0031 18.3 2.2 2 23 700 721 700 721 0.97
6 7 4.1e-06 0.00031 21.5 2.9 1 23 727 749 727 749 0.97
7 7 0.0023 0.17 12.8 0.0 1 22 755 776 755 776 0.96

Sequence Information

Coding Sequence
ATGGATGATATATGTCGATTATGTTGTTCTACGAACTTCGTCAATAACAATATATTCGACGAGGAGAATGCGCTTTATTTGAAAATGTCGTTATATTTACCAATAAAGGTATTCAAGAACGACAGGCTGCCTCAGAAGATCTGCGACAAGTGTAGTTGTAAAGTAAATGATTTTTATCAATTTTGTAATGAAACTATCGAAGTTCAAGCCAGGTTACGTTCATTCCACAGTTCCGGGACATGTATTAGTGAAACAATTGACTTATCTATAGTCAAAAGCAGCAGATCACCCCCACCCCCAGATATTCACATAAACAAGTTTTGTGATCGCAGCACACAGACAGAAACTCCAAAATTAGAAAATAAAAATGAAGAAATCCCGGTCAAAGAAGAACCTGTACCTAATATACCATCAGCAGTAAAAAAAGAAGAAGAAGAAGATGACCACTTCGATAATGATGGTGACGATTACGATGGAATGTCTTCTGATAGCGAAGACATATCACTAATTACACTAAAAAGCAAAAAGTTAAAGAAAACGGTAAATGGTGATATTAGTCCGAAGAAAGGTAGAAAGAAAAAAGATTTGAAAGAATGGGAGGCGCTTATGAGTGCGTTACCAGAGGCAGCGTTGACGATGGTAGATAGAGAACACTTGCCTAATCTAGAAGTGGAAGTTGTAAAAGAAGAGTTAGATGAACAACCGACAAATTCGGATCATATTCTGTCCGATATGAGCATGTTTCATTGTTGTATCTGTTTTGTACAATGTTACAGTAGAAATGAGATGCTGCAGCACTATAAACAACACGACAGCGAATCATCAACGATAGAACCACCTGCTGCACCGCCACCACCTGAACAGGAACCACCTAGGTGTACCAGGTGTCGGAAGGATGCATGGATGGAAATTGCTAATTTGATGGAAACAACACAAGAAAAATGTTACAGTAAAATGATTAGTATTTTATCATCCTACCGTCGTGAAAAAGCGAAGGAAAAGAAATCGAAAGGAACAGGAAAAGGTGCCTCGGAGACATACAAAAGTCGATGGTTTGCCTTTGATTCTTTGAAGTTCTTGGACAACCGTAACAAACCGAGAAAGAGAACGAACACGGAGGCGGTTCAACAACCGATTAATGAAGAAAATCTGCAGAACGAATTTGCTACTCCACGTACACGGTATGAACCTACGCGAGCTAAACAAGCAAAAAAAGATGAAAGCAGCAGTGTACTGGCCGATGTAGTGGGCATATTACAAACTACTGCCAATAAGTTGGGAAATTCAGGCGCTCCAGATTTAACTACAACTTTCGCTTCCTATATATCAGCTAAAATGAATACTTATTCCCTTCAAACCAGGAATTCGGTCGAACATGGAATTTTTGAAATTTTGATGAAGGCTGACAGAGGTTATTATGAATCATCATATCGACAGCAGGATAACTACCCCAGTTCATACCAAGAATCCTATTATGCATCACAGAAGAAAGGACAAGATTATGTGGATCTGACCGGATATGTTAATCGTCCTGGAACTTCCGGATTTAATCGTCCCTCGCCTTCCGCGCAAACTCCAGATACAAATCAAGCCGGACGCTATGGCTATACCACGGCAAGGAACGAAGAATATATGAACCAACAGCCATCGTCTACGGTGTCCCGGAGTGAATGGGCGACGCATTGGCAGCGACACTGGGAGCGAGACCGGCGACCTTACCGCTGTGTCATCTGTGAGAAGACATTCAGGGACGCGCATCAGATACTTAAACACGGTGCAACACATAATTATGGTGAAGGAGCGTCAACGGAGCCTATAAACAAGAGATTTGTGTGTGATCTATGTCCTGAAGGATTTGTCTacatgagGTACCTGCTGTCGCACCGCACGCGCGCGCACCCCGAGGCGCTGGGCCGCGCCGTGTCGCTGCGCTGCGCCGTGTGCGCGCGCCACTTCGCGCACGTCAACTCGCTGCGCCGCCACCTGCGCTCGCACTCGGGCGAGCGCAACTTCCTGTGCAACGTGTGCGGGAAGGCGCTCTCCTCCCGCGAACACCTCAAGTTCCACATCAGGATACACACTGGGTACAAGCCTAATGTTTGCAAGACTTGCGGAAAAGCTTTCGTAAAGAAATGTAACCTAACTCTTCACGAGCGAGTACATTCTGGTGAGAAGCCCCATGTCTGCTCACACTGTGGAAAGGCGTTTAGTCAACGGTCTACTCTTGTTATACATGAACGTTACCACAGCGGGGCTCGGCCGTACGTGTGCAGTCTGTGCGGTCGAGGGTTCGTCGCCAAGGGTCTACTGTCCATGCATCTGAAGACCACCTGTATATAG
Protein Sequence
MDDICRLCCSTNFVNNNIFDEENALYLKMSLYLPIKVFKNDRLPQKICDKCSCKVNDFYQFCNETIEVQARLRSFHSSGTCISETIDLSIVKSSRSPPPPDIHINKFCDRSTQTETPKLENKNEEIPVKEEPVPNIPSAVKKEEEEDDHFDNDGDDYDGMSSDSEDISLITLKSKKLKKTVNGDISPKKGRKKKDLKEWEALMSALPEAALTMVDREHLPNLEVEVVKEELDEQPTNSDHILSDMSMFHCCICFVQCYSRNEMLQHYKQHDSESSTIEPPAAPPPPEQEPPRCTRCRKDAWMEIANLMETTQEKCYSKMISILSSYRREKAKEKKSKGTGKGASETYKSRWFAFDSLKFLDNRNKPRKRTNTEAVQQPINEENLQNEFATPRTRYEPTRAKQAKKDESSSVLADVVGILQTTANKLGNSGAPDLTTTFASYISAKMNTYSLQTRNSVEHGIFEILMKADRGYYESSYRQQDNYPSSYQESYYASQKKGQDYVDLTGYVNRPGTSGFNRPSPSAQTPDTNQAGRYGYTTARNEEYMNQQPSSTVSRSEWATHWQRHWERDRRPYRCVICEKTFRDAHQILKHGATHNYGEGASTEPINKRFVCDLCPEGFVYMRYLLSHRTRAHPEALGRAVSLRCAVCARHFAHVNSLRRHLRSHSGERNFLCNVCGKALSSREHLKFHIRIHTGYKPNVCKTCGKAFVKKCNLTLHERVHSGEKPHVCSHCGKAFSQRSTLVIHERYHSGARPYVCSLCGRGFVAKGLLSMHLKTTCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-