Basic Information

Insect: Trisateles emortualis
Gene Symbol: -
Assembly: GCA_947095525.1
Location: OX352756.1:8679867-8680934[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0093 0.69 11.0 0.5 2 23 91 113 90 113 0.92

2 9 0.00077 0.057 14.4 3.2 2 23 136 157 135 157 0.96

3 9 0.00028 0.021 15.7 0.0 2 19 161 178 160 178 0.95

4 9 5 3.7e+02 2.4 1.3 2 23 185 207 184 207 0.84

5 9 0.00072 0.053 14.5 1.5 1 23 211 234 211 234 0.97

6 9 3.9e-05 0.0029 18.5 1.4 2 23 241 262 240 262 0.95

7 9 2.8e-05 0.0021 18.9 0.5 1 23 268 290 268 290 0.98

8 9 9.6e-06 0.00071 20.4 0.4 1 23 296 318 296 318 0.97

9 9 0.00046 0.034 15.1 3.1 1 21 324 344 324 347 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0093	0.69	11.0	0.5	2	23	91	113	90	113	0.92
2	9	0.00077	0.057	14.4	3.2	2	23	136	157	135	157	0.96
3	9	0.00028	0.021	15.7	0.0	2	19	161	178	160	178	0.95
4	9	5	3.7e+02	2.4	1.3	2	23	185	207	184	207	0.84
5	9	0.00072	0.053	14.5	1.5	1	23	211	234	211	234	0.97
6	9	3.9e-05	0.0029	18.5	1.4	2	23	241	262	240	262	0.95
7	9	2.8e-05	0.0021	18.9	0.5	1	23	268	290	268	290	0.98
8	9	9.6e-06	0.00071	20.4	0.4	1	23	296	318	296	318	0.97
9	9	0.00046	0.034	15.1	3.1	1	21	324	344	324	347	0.89

Sequence Information

Coding Sequence: ATGATGACCAACTTCGACCCAAGAACAAAACCGGACTGTTCCAAAATAAAGTCATATTTGATAAAGATACTTCAAATATCAACTGCCATGCCCTTTATGACGCACGAAAGCCAATATAAATGTTTCTACTGCGAATTTACTAACCATCTACCCTCAAAATTGAAAGAACATTATAAACAAAAACATAAATACATAAATTTTGATAAATATTTGAAAATTTGGACGGAATTTAGCTTAGAATCGAATCTTATGTTGGATATACAAAATTTACATTGCCGAGTCTGTGATAAAAGCATACCAGATATGAATAATTTAAAAATACATTTAAGCGAAATGCACAACGAAATTCTCCCAAAAAATATGTTGAAATCTGTCTTATGTTTCAAGCTCTTTGATGATATTATAACATGTCATCTATGTAAAAAGAAATTTGAAGATTTCAACAATCTATTAGACCATCTTAAATTTCACCGAGATTTATCTTGTGAAATATGCGATGAATCTTTTAAAACCAATGAAGAATTAATTGAACACGATAAAATTGATTGCAAACCTTGTAATTTATGTGAAATAAGATTCACATGTGCAAAACAACGAGATGTACATATAAAACAAGTCCATTGCAAAGGATACAAATGCGATTTTTGCTCTAAACAATTCAAGATAAAAATCAGATTAGCCCGCCATATTAAAAACATACATTATAAAGAAAAAAATGTTACATGCGATATTTGTGGCAAAACCTTTTTTGATAACCACTACCTCAATTTGCATAAAGTAAGTCATCTAAATACAAAACCATTTGAATGCAATGTTTGCAAAAATAAATTTGCAAGAGTTACAGCTTTGAAGTTACATATGAGGATTCATAATAATGATAGACGATATGTGTGCAAAGTTTGCGACAAATCTTTTGTGCAGTGGACGTCTTGGAATATGCACAAGACGGTGCATATCGATGAAAGGAATTTCAAGTGTCCGGTATGTGAGAGAGCGTTTAAAGACAAGAAAACTATGGAGAAGCATTGTAAAAATGTCCATCATAAAGAGGATATTAAAAAGATGTAG
Protein Sequence: MMTNFDPRTKPDCSKIKSYLIKILQISTAMPFMTHESQYKCFYCEFTNHLPSKLKEHYKQKHKYINFDKYLKIWTEFSLESNLMLDIQNLHCRVCDKSIPDMNNLKIHLSEMHNEILPKNMLKSVLCFKLFDDIITCHLCKKKFEDFNNLLDHLKFHRDLSCEICDESFKTNEELIEHDKIDCKPCNLCEIRFTCAKQRDVHIKQVHCKGYKCDFCSKQFKIKIRLARHIKNIHYKEKNVTCDICGKTFFDNHYLNLHKVSHLNTKPFECNVCKNKFARVTALKLHMRIHNNDRRYVCKVCDKSFVQWTSWNMHKTVHIDERNFKCPVCERAFKDKKTMEKHCKNVHHKEDIKKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -