Basic Information

Insect: Trisateles emortualis
Gene Symbol: -
Assembly: GCA_947095525.1
Location: OX352744.1:2582830-2594931[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.093 6.9 7.8 1.7 1 23 270 292 270 292 0.98

2 12 0.029 2.1 9.4 2.2 2 23 300 321 299 321 0.95

3 12 1.1 82 4.4 1.1 1 23 325 347 325 347 0.91

4 12 0.00041 0.031 15.2 0.7 1 23 352 375 352 375 0.97

5 12 0.00093 0.068 14.1 0.4 1 22 379 400 379 402 0.89

6 12 0.13 9.5 7.4 0.0 2 20 418 436 417 438 0.94

7 12 0.00028 0.02 15.8 0.7 3 23 449 470 448 470 0.97

8 12 3.7 2.7e+02 2.8 3.9 2 23 486 508 486 508 0.95

9 12 1e-06 7.7e-05 23.4 1.5 1 23 519 541 519 541 0.99

10 12 0.025 1.9 9.6 2.0 1 17 547 563 547 569 0.78

11 12 2e-05 0.0015 19.4 2.0 1 23 575 597 575 597 0.98

12 12 6.7e-05 0.0049 17.7 0.5 1 23 603 626 603 626 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.093	6.9	7.8	1.7	1	23	270	292	270	292	0.98
2	12	0.029	2.1	9.4	2.2	2	23	300	321	299	321	0.95
3	12	1.1	82	4.4	1.1	1	23	325	347	325	347	0.91
4	12	0.00041	0.031	15.2	0.7	1	23	352	375	352	375	0.97
5	12	0.00093	0.068	14.1	0.4	1	22	379	400	379	402	0.89
6	12	0.13	9.5	7.4	0.0	2	20	418	436	417	438	0.94
7	12	0.00028	0.02	15.8	0.7	3	23	449	470	448	470	0.97
8	12	3.7	2.7e+02	2.8	3.9	2	23	486	508	486	508	0.95
9	12	1e-06	7.7e-05	23.4	1.5	1	23	519	541	519	541	0.99
10	12	0.025	1.9	9.6	2.0	1	17	547	563	547	569	0.78
11	12	2e-05	0.0015	19.4	2.0	1	23	575	597	575	597	0.98
12	12	6.7e-05	0.0049	17.7	0.5	1	23	603	626	603	626	0.98

Sequence Information

Coding Sequence: ATGGAGAAGGTTAAACTGTGCCATATTTGTTTGGTAAAGGATCTAAGAATGTACGATTTGCAGTCACACCCTTTAAATACGTATTTTGGATCTGTAACGGGAAATAATCTATTAACAATAGTCAACTCTCCACCATACGCCTGCTATGAGTGTGCTGCACTTGTGAAAAAGTTTTATTTTTTTAAACAAAAGAGTACGAGAAGCCAAGCAGTGCTCTATGGATTAATAGATCACAGTGGAAAGATTGATTTATCAAAATTGAAACAAATAGATCGTCAACATTTGGGACTATGCTCAAATATCACGTACTCCTCACCAGATAGATCTGTTGAGAATGTTAAAGCTGAAGTGTTTATTAAAGAAGAAACGGTTGACGAAAATATACCCACAATCAAAATAAAATTTGTGAACTCTGAAATGATTGAAGATGATCCGGTAATAGAAACTATTGAATACGTTACAGTAAAAACAGATGATGTTAAAGAAGAAGAGTATGATCGGCTATCTGCTGATACATTATTGATCAGTGATGACAATGATGAAGATGAACCAATGATATTACATAAAGAGAATAAATTTAAAGATGTTAAAAAAGATGAAGATGAAAATGCCAATGTAGCCTTGCTTGAGGAGTTAAAAAATAACAAAGAAGTGTCAAAAGTTACCAAAAAGAAAAATAAAGGAAATTCAAGTAAATTATTAATTCGTGAACTAGAAGATCATGTCACTGTGATTAAACTATCCCAACAAGAACAATTAGAAGTGTTAAACAAAAGGAAGGAGTCGTCGAACTACCTCAACTCACCGTTCCAGTGTGAGTTGTGCTACAAGGGGTTCCTCCATACAGCCACCTGGGAGCTACACTTACGGAAACATTCGCCGAGCGCGGGCGCCATAGAGTGTCCAATATGCAAGATGAGGTTCAAAATGAAGAATCGTATGCGCTGGCACTTGACACATCATGCCACCAAATATGCGTGCAATTATTGTTCACACGTATCTTCTGTTTCGAATCAGGCGAAGTATCACCTGGGTCAGCATAACGGGATCACGTACACATGCGAGCAGTGTGGGGAAATATTCAAAGTAAGGACATCGTACTTGAGCCATGTGCGTTTAAAGCACCCGTCGGAGTTCATCTGCAACATTTGCGGCGGCTCCTATGTCAACAAGTATGGACTCTTCAGGCACAAAGTTCTGAAGCACAAGGATGCTGTGGAGAAAGGCGAGGAGATACAAGAAGACAGAATTTATTGTGAACAATGTGATGTCGGTTTTGTATCAATGGCTGCGTACAAACGACACACTGTACTGTCCACCAAACACACCAGGAACATCAATGCCTGTCGTACTTGCGGTGAGACATTCAACAGTAAAGAAGATGTGAAGGAGCATCGTCGTAAGGAGCACCCAAAGAAGCAGTCGAACAGTAACAAGACCAATTGTAAATGGCCCAAGTGCGAACATTGTTCAGAAGAGTTCGAGAACGGTCGTGAACACCGGTCCCACTACCGACGCATACACCCAGACAAGAAGTACCCCACCCAGATGAACTATGTCTGCGATATATGCGGGAAGAGCTTTAAATTGAACGCGCACCTAGCATACCACAAACGGACGCACACAGGAGAGCGACCACACAAATGCACGCAGTGCGACAAGGCGTTCTCCACGAGACAAATACTGCAGTTTCACGAACAGAGTCACACCGACATACGTCCCTTCGTATGTGACGTTTGTCACAAAGCCTTCAAGTTTAAGTATGCTGTCAAGAGGCATTTAGCTACTCACACCGGCGAGAGACCGTATCAGTGTGAGATATGTAGCAAGACGTTTACAACAGCCAACGGTCGCAAACTTCATGTCAACACAGTACACTTCAGACAACCGGAGAGTTTCGTCACTCGCAAACGGAAAAAGAAAAGCAAGAACATTGACAAGGAACCGCCACACTAA
Protein Sequence: MEKVKLCHICLVKDLRMYDLQSHPLNTYFGSVTGNNLLTIVNSPPYACYECAALVKKFYFFKQKSTRSQAVLYGLIDHSGKIDLSKLKQIDRQHLGLCSNITYSSPDRSVENVKAEVFIKEETVDENIPTIKIKFVNSEMIEDDPVIETIEYVTVKTDDVKEEEYDRLSADTLLISDDNDEDEPMILHKENKFKDVKKDEDENANVALLEELKNNKEVSKVTKKKNKGNSSKLLIRELEDHVTVIKLSQQEQLEVLNKRKESSNYLNSPFQCELCYKGFLHTATWELHLRKHSPSAGAIECPICKMRFKMKNRMRWHLTHHATKYACNYCSHVSSVSNQAKYHLGQHNGITYTCEQCGEIFKVRTSYLSHVRLKHPSEFICNICGGSYVNKYGLFRHKVLKHKDAVEKGEEIQEDRIYCEQCDVGFVSMAAYKRHTVLSTKHTRNINACRTCGETFNSKEDVKEHRRKEHPKKQSNSNKTNCKWPKCEHCSEEFENGREHRSHYRRIHPDKKYPTQMNYVCDICGKSFKLNAHLAYHKRTHTGERPHKCTQCDKAFSTRQILQFHEQSHTDIRPFVCDVCHKAFKFKYAVKRHLATHTGERPYQCEICSKTFTTANGRKLHVNTVHFRQPESFVTRKRKKKSKNIDKEPPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -