Temo021592.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352756.1:7618865-7635853[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.024 1.8 9.7 0.4 3 23 250 271 249 271 0.97 2 17 2.9 2.1e+02 3.1 0.1 2 23 297 319 296 319 0.93 3 17 0.00012 0.0086 17.0 1.6 1 23 341 363 341 363 0.98 4 17 0.00071 0.053 14.5 0.7 1 23 367 390 367 390 0.98 5 17 0.026 1.9 9.6 0.5 2 22 396 416 395 416 0.94 6 17 0.014 1.1 10.4 2.0 1 23 423 446 423 446 0.96 7 17 0.045 3.4 8.8 1.7 1 23 453 475 453 476 0.95 8 17 3.2 2.4e+02 3.0 0.7 2 23 563 585 562 585 0.94 9 17 0.2 15 6.8 0.8 2 23 612 634 611 634 0.90 10 17 0.27 20 6.3 0.2 2 19 657 674 656 676 0.94 11 17 9.1e-07 6.7e-05 23.6 0.6 1 23 682 705 682 705 0.94 12 17 2.6 1.9e+02 3.3 0.1 5 20 713 728 710 730 0.86 13 17 0.044 3.3 8.8 0.8 1 23 737 760 737 760 0.88 14 17 0.00018 0.014 16.3 0.9 1 23 769 792 769 792 0.95 15 17 0.00011 0.0083 17.0 0.1 1 23 797 819 797 819 0.96 16 17 4.2e-05 0.0031 18.4 2.7 1 20 825 844 825 847 0.94 17 17 0.00099 0.073 14.0 2.1 1 23 853 876 853 876 0.96
Sequence Information
- Coding Sequence
- ATGGATGCGAAAAGCTCAGAATGGCGACCCGGTCCGACTGTATGCCGTTGTTGTTTGACAGAGGGATGTTACAAAGACATTTCTACAGAATATTTTTGGATGGGAAAACGAGAAGTATATTCCGAAATGCTTTCGGACACTTTTAATGTTACGATTGCTTATTCCCAGTCCGGTGGTCCAAACAGTAATAGCCGTTTGATATGTGAGCCATGTATATCTAGGCTTAGAGATGCGTGCGACTTTAGGAGGCAGGTGTTGGAGTGTGAGAAGACTTTCATGCACCATTTGGATCCTGGCAGTTCAGGCTCTACTGAGTTAGAAGTTCCAATAGAAAGTATAGAGTCAGATGTGAAGTTGGAGCGGATTAAACTAGAGAAGCGGTTAAGTGATGACGATTTTGATGACAGAGACTTTGATGACAACGACTCAGATGATGATATGGATGATGAACCTCTAACAAAACTAGCAAGTAAAATACCTAAAAAGGAGTCTGTAGACCTAATGGATCTATTAGACAACACGAAGGCAGCTGAGAAACGAAAGTCCACGTCTAAAACTAAAGTTGTTCCAGCCAAAAAGTCTAAGATTGTGAAGAAGGAAACTGTCAAAGCATCTGTCAGTAAAATACCGCCAAAACAGGAGAAGAAGAAAAAAGCCGAAAGTTGTGATGCGACGCGCGCTAACGCCGAGATTATAATCAGCTGTACAACAGCTTACCCATTTCGAGTGAACGATAAATCTATACTGTGCGTCTACTGCCAAGAATTATACGAAGACCCGGACACGTTCCGACACCACATGGATACAGAACACGACTACTTTAGCATCAAAGTTGCGTTCCATCACCTACCTAAAAACGAATTTATCAAAGCTGATTTGACTAACTTGAGATGTCGAGCATGCAGACAACAATTCCCAGATTTAGAAACAGTTTTAACCCACATTGGAACTGAACATAATAAGAATGTTAATCCAAATGGAAAATTAGGTGTCATGCCGTATTATTTGCAGAAAGATATCTACAATTGTGCTGTATGCGAAAAGAATTTTCCATCACTATTCCATTTGAATAGGCATACAATAACTCATTTCTTAAGTTACGTATGCCATGTTTGTGGTAGCAGTTACGTAGCAACCACAGGATTGCTCAGACATATGCGTTCAAAACACCAAAGTTATGAAGTGTCATGCAAGAGGTGCAAAAAAGTATTTCCTACTATGGAAGCGAAGGAAAAACATACGCGAACTGAGAAATCTTGCATGCCGTATTGCTGTCCTAAATGTCAGGAAAGATTCTTAGATTGGAAGACGAGGAAACGTCATATGGAAGTAGCACATGGGCAGTCTAAACGAACGTATCGATGCGCGGATTGCAACGTAGACTTTACAAATGAGAATGCGTATTATGAGCATTTTAAATTGCATCATTCGGATGATTGTGCTACAGACACAGATATAACCTTAGGAAATAACAAGAAAAGAACTATAATGAAAAACAGCTTACTGGAAATGCCTCAACGAATCTCTCAAACTTCTGCCATCAAAGAGCATTACCAAAACAAATGTGACAAAGAAGAATTTCTTTTTGTTCTAGAGTTTGATCCGTTGGTCGAAGCGCGACAAAACGCTAAGGTAGTGTTGAGGTACTCAACGGCGTATCCGTTCAGGATACCCGCCAATGACATGGTGTGCGTATACTGCTGCGAGCCGTTCGAGGAGCCACAGAGGTACAGAGACCACATGAAACGCGACCATAACTCGTTCAACGTCGACACAGCATTCGCGCATACTGTCAGCGCTGAGGAATTCATCAAAGTAGATTGTACGGACCTTCAGTGCCGACTCTGTTCTAAAACATTCGACACAATCACTACAGTAGCTGAACATCTACATCTTGATCATGATAAAAAAATCAACCTCAATGCAGAAGTAGGACTTCAAGTGTTCAAACTTGGACAAGAACGTTGGGTGTGCGCGGTCTGCTCGCACAAATTTCCGTCTCTAAGAGCTCTCAGCAGACATAACAGTTGCCACTACCACAAATACACATGCGAGACTTGCGGCAAGTCGTATATAAGTAAAGAAAACTTAAACAAGCACATCTTATTCGGACATTCGCAAGAAAAAATATGTATAAAATGCCGCAAATCATTTCCGAATAGCGAAGCCCGCCGTTTGCATGTTTTGGCCACAAGGCGTTGTTGGCCATTCGCTTGCAACTTATGTGGCGAACGATTTGTGTCTAGAAAGTTGAAATTTTCCCACAAAAGCGAAGTCCACAGTGTGGGCAACACAAAAAAATGTCACACATGTCCAGAATGCCAAAGATCATTTGACGAATGGAGGCAATACAGAGCACATTATATAATTTCGCATACAGATATGAATTACGTATGTCCTTTTTGTGGTATTAAATTTGATAATAAAGGCGCTTTAGAAAGCCATAAAGTAATACATACAAAAGAAAAATTATTCCATTGTACTGAGTGTTCCAAATCTTTTGTGAGAAAGAAGAATCTGTCGCAGCATATGTGGATACATAGCGAGCATAAAAGATTTCAATGCTTGCCTTGCAATAAGAAGTTTAATCAAAGAGTTAGCTGGAAAACGCACATGAGGTCTTACCATCCAGAATTGGTAGACTTTTAA
- Protein Sequence
- MDAKSSEWRPGPTVCRCCLTEGCYKDISTEYFWMGKREVYSEMLSDTFNVTIAYSQSGGPNSNSRLICEPCISRLRDACDFRRQVLECEKTFMHHLDPGSSGSTELEVPIESIESDVKLERIKLEKRLSDDDFDDRDFDDNDSDDDMDDEPLTKLASKIPKKESVDLMDLLDNTKAAEKRKSTSKTKVVPAKKSKIVKKETVKASVSKIPPKQEKKKKAESCDATRANAEIIISCTTAYPFRVNDKSILCVYCQELYEDPDTFRHHMDTEHDYFSIKVAFHHLPKNEFIKADLTNLRCRACRQQFPDLETVLTHIGTEHNKNVNPNGKLGVMPYYLQKDIYNCAVCEKNFPSLFHLNRHTITHFLSYVCHVCGSSYVATTGLLRHMRSKHQSYEVSCKRCKKVFPTMEAKEKHTRTEKSCMPYCCPKCQERFLDWKTRKRHMEVAHGQSKRTYRCADCNVDFTNENAYYEHFKLHHSDDCATDTDITLGNNKKRTIMKNSLLEMPQRISQTSAIKEHYQNKCDKEEFLFVLEFDPLVEARQNAKVVLRYSTAYPFRIPANDMVCVYCCEPFEEPQRYRDHMKRDHNSFNVDTAFAHTVSAEEFIKVDCTDLQCRLCSKTFDTITTVAEHLHLDHDKKINLNAEVGLQVFKLGQERWVCAVCSHKFPSLRALSRHNSCHYHKYTCETCGKSYISKENLNKHILFGHSQEKICIKCRKSFPNSEARRLHVLATRRCWPFACNLCGERFVSRKLKFSHKSEVHSVGNTKKCHTCPECQRSFDEWRQYRAHYIISHTDMNYVCPFCGIKFDNKGALESHKVIHTKEKLFHCTECSKSFVRKKNLSQHMWIHSEHKRFQCLPCNKKFNQRVSWKTHMRSYHPELVDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909099;
- 90% Identity
- -
- 80% Identity
- -