Temo014516.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352755.1:1218113-1221660[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00033 0.024 15.5 0.6 1 23 225 248 225 248 0.94 2 18 1.5e-05 0.0011 19.7 3.3 1 23 253 275 253 275 0.99 3 18 6.5 4.8e+02 2.0 0.2 2 23 279 300 279 300 0.88 4 18 0.0015 0.11 13.5 0.5 1 23 305 328 305 328 0.95 5 18 0.001 0.076 14.0 0.7 2 23 389 411 388 411 0.96 6 18 0.00043 0.032 15.2 1.0 1 23 417 440 417 440 0.93 7 18 0.0054 0.4 11.7 0.4 2 21 444 463 443 464 0.92 8 18 0.088 6.5 7.9 0.2 1 23 472 495 472 495 0.94 9 18 2.3 1.7e+02 3.4 1.7 1 23 500 523 500 523 0.93 10 18 0.00055 0.041 14.8 0.1 2 23 536 557 535 557 0.96 11 18 0.0067 0.49 11.4 2.2 1 23 563 585 563 585 0.97 12 18 0.0067 0.5 11.4 3.3 1 23 621 643 621 643 0.96 13 18 0.0049 0.36 11.9 0.3 3 23 649 669 648 669 0.94 14 18 0.00034 0.025 15.5 1.6 2 23 682 704 681 704 0.96 15 18 0.00099 0.073 14.0 2.7 1 23 710 732 710 732 0.98 16 18 0.0014 0.1 13.6 6.4 2 23 739 760 738 760 0.96 17 18 9.9e-05 0.0073 17.2 2.4 1 23 766 789 766 789 0.97 18 18 3.5 2.6e+02 2.9 3.3 3 23 796 817 794 817 0.95
Sequence Information
- Coding Sequence
- ATGATGGAGCCTAAAATAGAGAATGATTCTGAAAACCTGGATTGGTTGAAACAAAAACTTAATGTTCTATGGACATCACCCAAGTTCTGTGGTCTATGCTTAGAGAACACAGGAAACTTTTGTTCTATTGAAATGGAACTGGTCATCAACAAACAGAAATTTTCAAGATGCCTACAGGATATCATTAATTATGTTTTTAATGATGATGTTGAAAGCCTAATGTCAAGCCCCTACTTGTGTGACAACTGCACTGAAAAAATTATACAATCATACATTTTCATACATAACACTAAACAACTATCAAGAATTATGAGCAACTGTGTGGGTGACATATATTCTAAAGTTATTGATGTTAATGAACAAGTTAGCCATTCAGCTGACTTTGACAATGCCAATGTTATGATAGTTCTAGAGAATGATGTGGATTTATACAAAACTCTAATAGACACAAAGATGACTGAAATTATACCAACCGCTACACCTATAGCCATGAAGAAAGAGGAGCCAAAAATAGCAGTCATAGAAAAAATTGAATCACATAAAGAAACATTAATAAAATTGGAAGATAAACCAATAAAGACTGAACCTACACCAAATATAACTTTAAAAGAAGGACACATTATTATAAAACCATTGAATTCAGCGAGGAACTTGACTCCCCGTTATAATACTTACGAATGTCCAAATTGTACAGAGATTTTTACCACATATCGGTCATTGAAAGAACATGAAAAAGCTAAGCATAACAAGCTAGTCTTCCGTTGTAACCTTTGTGACAAAACCTATAACACTCGTCAATATTTAAACATACATTATAAGACTCATGCTAAGGCCAAATGTAAATTTTGCCAACAGATTTTACCTGAAGGAGAATTGATGGCTCATTTGAGAGCAAATCATGCATATTTAGTGTTCCCTTGCAAATTTTGTGACTTAGTTTATTATTCACAAGATTCATTAGTGACACATTTTAATATCAGCCATTTAGTTAACAACACTAAAGTAAAATCTCAATGTATAATGTGTTTGAGGAATTTCAAAGAAAATGAGATAAAGAAACATAAATGTAAGTTTAATTGTTCTGAATGTTTTGTGATGCCGTGCATACATTTTAAATATCTAATGTCTTATAGGGAACAGACATTGAATCATGCTAATAGAGTGAAGTGTATGGACTGTGACTATGTCACTAGAAGGAAAGAGCACTTGATTGGTCATGTGAATAGGGAGCATTTGGATCACCATCCCTTTACATGTGCCGATTGTGGTCAGCAATTTTACACCAAGCTGAGTTTAAAGACACATATTGTACAATTCCACCAAGACCTCAATTGTGAATTCTGCGATTTTGAATTCAAGGATAATAATAGTTTAGAAAACCACAAAAAAGTGTGCAAATCAGTTAAAAGGTCATTTAGTTGCAACCATTGCGTGGCTACATTTGATTTAGAAGAAGAACTGGTTGCTCATGAAAATTTGAGACATAGCGAGAGTGTTCACCCGTGTAACCTATGTAAAAGCAAATTCTTAACTAATATAGAACTAGAGGAACACCATGCGCGAGTTCATGGTGGTATTCAATGCAAGAAACGAAGAAAACACATAGAATGTTCGATATGCGACATAATGTTTAAAAATATTAAAGAATTGCTTCAACATGAAAAAGTACATGAACCTGATGAGATATACCCGTGTAAGGTGTGTTCTAAACAGTTCAAAAGTTTAATGAAGTTGTACATGCACAATCAGAGGCACTACACCAATAGAATAAAGTGTACTCGCTGCAATAAGAAAGTGGCAACGTCATTCTACTCACAACACGCAGTCAGGTGCCCATACAAAAGAGAATCTGCCTTAAGTCACGTGTGTGAAGTTTGCGGTAAATCCTTCCATTTAGAATCTTTGCTACGTTTCCACCAGAAAATGCATATGGAGCGAGAACCATGCCCACAGTGTGATAAAAGTATGAAACCATCCAGCTTAAAGAGACACATGGAACAAATTCATGGCGTAGAAAAGAAATTAGCACAAAAGCCTGCAATTGAATGTCAGTTGTGTGGTCATGTAGTTAGAAAGAAGCACGATTTGGAAGCACATATGAACCGATACCATTTGAAGATTAAACCGTATGTCTGTCATATATGTAGCAAAGACTTCTGTGGTAAAATAAGGTTGAAAGAACACATAGCAACTCATACCACAGACAACAGTTGCTTTTGCACAGAGTGTGGCAAGAAATTTGCTAACCGTGTGTGCTTGAAAATGCACTTTAGGATGCATACGGGAGAGTTACCATACTCTTGTGATTTATGTGGACAAAAATTCCGATCTTCCAGTATGATGAAGACTCATCGGTTGAAGAAGCATTTGGACAAAACAGTTTGCTGTCCACTGTGCGACAGTATGTTCTATATGGTGCGAGATATGAGGCATCATTTCAAGAAAGTTCACTGGAAATTCAAGGACAGACCTTTTAATGTGAGAGAGGTTGAGGAATTGGATAAAGAATACTACTACCTGTTCGAAGATGGGCGACTACCTAAACTTGATTCTTGA
- Protein Sequence
- MMEPKIENDSENLDWLKQKLNVLWTSPKFCGLCLENTGNFCSIEMELVINKQKFSRCLQDIINYVFNDDVESLMSSPYLCDNCTEKIIQSYIFIHNTKQLSRIMSNCVGDIYSKVIDVNEQVSHSADFDNANVMIVLENDVDLYKTLIDTKMTEIIPTATPIAMKKEEPKIAVIEKIESHKETLIKLEDKPIKTEPTPNITLKEGHIIIKPLNSARNLTPRYNTYECPNCTEIFTTYRSLKEHEKAKHNKLVFRCNLCDKTYNTRQYLNIHYKTHAKAKCKFCQQILPEGELMAHLRANHAYLVFPCKFCDLVYYSQDSLVTHFNISHLVNNTKVKSQCIMCLRNFKENEIKKHKCKFNCSECFVMPCIHFKYLMSYREQTLNHANRVKCMDCDYVTRRKEHLIGHVNREHLDHHPFTCADCGQQFYTKLSLKTHIVQFHQDLNCEFCDFEFKDNNSLENHKKVCKSVKRSFSCNHCVATFDLEEELVAHENLRHSESVHPCNLCKSKFLTNIELEEHHARVHGGIQCKKRRKHIECSICDIMFKNIKELLQHEKVHEPDEIYPCKVCSKQFKSLMKLYMHNQRHYTNRIKCTRCNKKVATSFYSQHAVRCPYKRESALSHVCEVCGKSFHLESLLRFHQKMHMEREPCPQCDKSMKPSSLKRHMEQIHGVEKKLAQKPAIECQLCGHVVRKKHDLEAHMNRYHLKIKPYVCHICSKDFCGKIRLKEHIATHTTDNSCFCTECGKKFANRVCLKMHFRMHTGELPYSCDLCGQKFRSSSMMKTHRLKKHLDKTVCCPLCDSMFYMVRDMRHHFKKVHWKFKDRPFNVREVEELDKEYYYLFEDGRLPKLDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281660;
- 90% Identity
- -
- 80% Identity
- -