Temo021647.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352756.1:8650734-8662994[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.25 19 6.5 1.1 1 23 236 258 236 258 0.95 2 16 0.067 4.9 8.3 0.0 3 23 288 309 286 309 0.93 3 16 0.099 7.3 7.7 0.2 2 23 330 352 329 352 0.94 4 16 0.00051 0.037 14.9 2.5 2 23 358 380 357 380 0.95 5 16 0.00035 0.026 15.4 0.9 1 23 385 408 385 408 0.96 6 16 0.45 33 5.7 0.4 2 23 411 433 410 433 0.93 7 16 0.17 13 7.0 2.0 2 21 440 459 439 460 0.92 8 16 0.0096 0.71 10.9 0.5 1 23 520 543 520 543 0.89 9 16 0.061 4.5 8.4 0.1 3 23 572 593 570 593 0.94 10 16 0.11 7.9 7.6 0.2 3 23 617 639 615 639 0.94 11 16 0.00054 0.04 14.9 0.6 3 20 646 663 644 667 0.90 12 16 0.011 0.78 10.8 0.4 1 23 672 695 672 695 0.97 13 16 0.00036 0.027 15.4 0.2 2 23 701 723 701 723 0.94 14 16 4e-05 0.0029 18.4 4.7 1 23 727 750 727 750 0.97 15 16 0.00017 0.013 16.4 0.6 2 23 757 778 756 778 0.96 16 16 0.0027 0.2 12.7 2.3 1 23 784 806 784 806 0.97
Sequence Information
- Coding Sequence
- ATGATGGAGTTCGACGAGATCGTGGTCAAGGAAAGCCCCGGTCTATGCCGGTGCTGTCTTTCCGAAGGGTGTTACAAAGACTTAGGGTCCGAGTACACCTGGATGAATGATACAGAGGTGTATGCTGATATGCTGTTGGAATGTTTTGATATTAGTATCACACAACACAACGAAGGCCCAAATGGACCAAACCGACTTATATGTGAAGTTTGCATCACAAGGCTGCGGGATGCTTGCAATTTTAAGAAACAAGTCCTGGATTCTGAGAAGAGGTTTATCGATATGATGGGACGTGGCGAGTTCAGACCGAAGATGCTTATATACCAGACACATATGAAATGTGAAGATCCAGTTGTTGAGGCACCGGTTGAAGAAGCGGAGGTAGAATACTTGGAGGACGACATGGATTTTGTTGATGACGCAGAAGACTTAAAGGAAGAAGCAGTACCATCGATCTCAGACATCACAGTGACCTCTTTACCTATTAAAGGGAAGCGAGGAAGACCAAGGAAGAACTTGGTGAAGACAGAGAAAAAAGCCAAGGTGGCCAAGCTGGAGGAGAAGGCGAAAACTTCCAAGACTATTGCTAAAGATGTTAAACCGAGGAAATACAATGGCAGCGAATCATCATCGATGCGCCGAAGGCGAAACCTTCAAATTATATTCAACAATACATCAATTATACCATTTAAGTGGCGAGGGAAATACCTATGCTTTTACTGTAGTAAAGATTTACCAGAATATCTAGATCTCCGTAAACATACCAAATCACATGGCGATTGTTCTACTAAAGATCATTCGTTAAAGGTCTTGAAAGGTGGTCAGAATATGGAAATCAAAGTAGACGTGTCAGATATTAATTGTGAAATTTGCTCAGAACCGTTTCCAAGTTTCGATGAAGTTATCAATCATCTTTTTGTTAAGCATAAGTTAGAGTATGATAGATCTGTTGAAATGGCTATTGAAGAATATAAATTGATAGATCTTAGTTGTCAAGCTTGCGAGGAAAAATTCACATATTTCGGTTATTTAGTATCCCACGTTAATGTAAATCATCCTAAGAATTGTCTTATTTGCGATAAGTGCAATCAGAAATTTAATAAAAGACGTGACCTATTCTCCCATATGAAAAACTATCATAGAGAGGGTGGGTACCAATGTGAACTGTGTCCGAAGGTTTTTAGCTCACTTAATATACTAAGAAAACATAGAAATAATAGGCATTTGACTAGATGTAATATTTGTCATTTAAGACTACCATCAGCTGCTTTGAAGCAGAAGCACGTCGAGATAGAGCATCCAGACGATGGATCGCTACAATGTGACAGTTGCTTCAAAGAGTTCCACACAAAACAAGGTTTACGTATGCATAACAGAAAGTGTAAAGGTGACGGTATCTTTGAAATTGCAATTAAAAAAGAAGAATACGTGGCTATGGATTTAGACCAAAACTACGAAGATGAAGTGAAAAGACCGAGCGTAAAACAAATTCGGGAAAATATTTTAATTGTTATAAACATGTCGACGGCTATACCTTTTAATTTTTATAAAAATAAATTCAACTGCTTTTATTGCTCCAAAGACTTCCCAGATTCTGATTTAATGAGAGAACATACGGTATTAGAACATCCAGTTTGCGATATCAAACAAAAATGTATCAGAAAATGTCGCGAATCCGTTGCGTGCGTCAAAATCGACGTATCATCTCTAGCTTGCAAAATATGCTTTGAATCTATGTCCGATTTGGACAATCTACTAGACCATCTGATTGTTAAACACGACGCAAATTATGACAAATCAATCACAACATGCCTGCAACCGTACAATCTAATAAAGGACCATATGGCTTGTCCAAATTGTCCCGGAGAAATATTCAGATTCTTCGGAACTTTACTCAAACATATGAACAAGAAACATACCAATAATAACATTATTTGTGTCTATTGCGGTCAGACTTTCCGTCGGGATCAAAATTTACGCGTACACATATGGAGGCATCATAGGGACGGTAGGTTTAAATGTACTATATGTGGTGCAGAATGCAATATTCCATCAAGACTGTACATGCATATGGCAAGAGCTCACGGTGTTAAAGCAGCCAAATGTCCGAAATGTCCTGAAAGTTTTGCGACTCAGTATTTGCGTCAGAAACATTTGATTGAAGCGCATAATTGTGGACACAAATGTTCTTATTGCGGTAAACTCTTCACTCGGAATTCGTTTATGCGAGATcatataagaagaacgcatttaaaagagaagaatgtcgaatgctccatttgtaatatgaagttttttaataatatattgctcagacggcatatggtgaaacatagtggggagaagaattttcattgtgatatttgtgGAGAAAGATTCTTTTGGAGAAAGAGTCTTCGGACTCATATGGCTAGGCATAATAAACATATTAATCCTGTACAAATTTAG
- Protein Sequence
- MMEFDEIVVKESPGLCRCCLSEGCYKDLGSEYTWMNDTEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVLDSEKRFIDMMGRGEFRPKMLIYQTHMKCEDPVVEAPVEEAEVEYLEDDMDFVDDAEDLKEEAVPSISDITVTSLPIKGKRGRPRKNLVKTEKKAKVAKLEEKAKTSKTIAKDVKPRKYNGSESSSMRRRRNLQIIFNNTSIIPFKWRGKYLCFYCSKDLPEYLDLRKHTKSHGDCSTKDHSLKVLKGGQNMEIKVDVSDINCEICSEPFPSFDEVINHLFVKHKLEYDRSVEMAIEEYKLIDLSCQACEEKFTYFGYLVSHVNVNHPKNCLICDKCNQKFNKRRDLFSHMKNYHREGGYQCELCPKVFSSLNILRKHRNNRHLTRCNICHLRLPSAALKQKHVEIEHPDDGSLQCDSCFKEFHTKQGLRMHNRKCKGDGIFEIAIKKEEYVAMDLDQNYEDEVKRPSVKQIRENILIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTVLEHPVCDIKQKCIRKCRESVACVKIDVSSLACKICFESMSDLDNLLDHLIVKHDANYDKSITTCLQPYNLIKDHMACPNCPGEIFRFFGTLLKHMNKKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCTICGAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYLRQKHLIEAHNCGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMARHNKHINPVQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00071771;
- 90% Identity
- iTF_00795069;
- 80% Identity
- -