Temo018318.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352738.1:17829756-17839985[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.046 3.4 8.8 1.5 1 23 14 36 14 36 0.98 2 19 0.015 1.1 10.3 0.4 2 23 58 79 57 79 0.96 3 19 2.6e-05 0.0019 19.0 0.2 1 23 106 128 106 128 0.96 4 19 0.23 17 6.6 0.2 1 23 339 362 339 362 0.97 5 19 9.5e-05 0.0071 17.2 0.9 1 21 368 388 368 390 0.95 6 19 0.00057 0.042 14.8 0.8 2 23 397 418 396 418 0.98 7 19 0.012 0.88 10.6 2.0 1 23 424 446 424 446 0.97 8 19 0.024 1.8 9.7 0.5 1 23 452 474 452 474 0.96 9 19 0.00022 0.016 16.1 0.8 1 23 480 503 480 503 0.97 10 19 0.0055 0.41 11.7 1.8 1 23 509 532 509 532 0.96 11 19 0.66 49 5.1 0.1 3 23 541 561 539 561 0.94 12 19 0.0014 0.11 13.5 2.3 1 23 567 589 567 589 0.97 13 19 0.23 17 6.6 0.2 1 23 714 737 714 737 0.97 14 19 0.017 1.3 10.1 1.3 1 23 754 776 754 776 0.95 15 19 0.021 1.5 9.9 0.4 1 23 782 804 782 804 0.96 16 19 0.00022 0.016 16.1 0.8 1 23 810 833 810 833 0.97 17 19 0.0055 0.41 11.7 1.8 1 23 839 862 839 862 0.96 18 19 0.66 49 5.1 0.1 3 23 871 891 869 891 0.94 19 19 0.0014 0.11 13.5 2.3 1 23 897 919 897 919 0.97
Sequence Information
- Coding Sequence
- ATGAAACCAGTACTACCAGAAGTGCAGATAGAAAAAGTCCATAAATGTGGTCGGTGTGCAAAAACATTTCTGGATGTCAATGAATTGAACACACACATTAAAAGCCATGATAACTCGCTTTATGAACATGCTGCCAATGCTTATGTGAAGATAGAAAAAGTTGATATACTGGAATGTGACATTTGTAGACATGCGTTTTTGACAAAAAGCGCACTTTTACTACATATGCTGGAACACAAACATAAATCAGATAAAAAATCCATGCATCAGAAAATATCTAATGATTCAAATGGAAACACCACTATCGATAAACCCTACAAATGTCCAGAATGTGACTACAGATTTGTCGCAAAATCGACCCTACAAGCACACTCTATAATTCATGAACCATTCCCACACAATTGTCACTGCAGTATTGGATTCTACAGACTCATCGATTTAAAACACCACAAAAAATTAGTGCACACTAAACTTAAAAAAGAAAAAAATCTTAAAGAAAATTCAATAAAAAAATCTAATGATACAATAAAAGTGAAGTTTCCATTTAAGAATAAAAAAGCTAAAGAACACACTAAACTTGCAAAAGAAAAAAAGAAGAAAGGAAATGATCCAATAAAAAAAACTAATGATTCAATAAAAGTGAATCTTCCATTTAAGAATAAAAAGGGTAAAGAACACACTAAACTTGAATCAGAAAAAGAACTTGAAGAGAATAATTCAATAAAAATATCTAATGATTCATTGAAAGTGAAGCTTCCATTTAAGAATAAGGAGGGTAAAGAACATACTAAACTTGAAACAGAAAAAGAGCTCGAAAATAATTCAATAAAAAAAACGAAAGCTTCAATAATAGTAAAAATTCCATTTAAGAATAAAAAGAGTAAAGAACTTAAAATACCTGTAGAAATAAAAGAAAAAGTGAAACATCCAGAACTTGCTGAAGCAATGAAAATAGCATTAAGTAAGGTATCACTAACACCTTTAGATTTAGATATCGAATGTGTTGGCGATAAGTATCAGTGTCCTGAGTGCCTTAAATGGCTTGCAAGTAAAAGATATGTTGAGGTACACTACCGTTCTGTGCACAGAGGTGAACGCCCATACTCCTGTCATATTTGTAACAAATCTTTCTCTAAAATAGCTGGACTTAGGTTACACATAAAGCCTCATTTGGGAATTAAAGATAATAAGTGCGATTATTGTGATAAAGCCTTCATAAATCTAGGTAAGAAAGTTAAACATGAGCGCACTCATACTGGTTATAAGCCATATGTTTGTTCTTTTTGTGATAAAGCTTTTAGTGAACAGAATTCTTGCACTCTTCATGAAAGAATTCATACTGGTGATAAAAGATACCTTTGTCAATTTTGTCCCAATAAATACATCGACTACAGTGGCCTGTCTGTCCACTTGAAACGACATGAAAACAGAAAGGATTATAAGTGTGACAAATGTGACCGAAGTTTCTACGACAAAAGAATACTTCTTAAGCATATATCTGTAGTACATAATCACGTGTACAATTTCATCTGTGACTATTGCATGAAAGCGTTTAGTACTAAAGCAAACCTTCTATGTCATATACAGAGACTACATAGTAATATAAAGAAAGGTACTGCATGTCCTCTTTGTAACATGGTTTTAAGCAAAAATAGTATTAAAAACCACATAAAAGTTGTGCATAGAAGAAATAAACAGTTCACTTGTGATCATTGTTACAGCCAGTTTGCAAATAAGTCTAGGTTAATAAAGCATATGGTAGTGCATTATAATGTCAAAAAGAATAAAAAGGCTAAAGAACACACTAAACTTGCAAAAGAAAAAAAGAAGAAAGGAAATGATCCAATAAAGAAAACTAATGATTCAATAAAAGTGAAGCTTCCATTTAAAAATAAGGAGGGTAAAGAACACACTAAACTTGAAACAGAAAAAGAACTCGAAAATAATTCAATAAAAAAAACGAAAGCTTCAATAATAGTAAAAATTCCATTTAAGAATAAAAAGGGTAAAGAACTTAAAATACCTGTAGAAATAAAAGAAAAAGTGAAACATCCAGAACTTGCTGAAGCAATGAAAATAGCATTAAGTAAGGTATCACTAACACCTTTAGATTTAGATATCGAATGTGTTGGCGATAAGTATCAGTGTCCTGAGTGCCTTAAATGGCTTGCAAGTAAAAGATATGTTGAGGTACACTACCGTTCTGTGCACAGAGGTCAGAAAGTTAAACATGAGCGCACTCATACTGGTTATAAGCCATATGTTTGTTCTTTTTGTGATAAAGCTTTTAGTGAACAGAATTCTTGCGCTCTTCATGAAAGAATTCATACTGGTGATAAAAGATACCTTTGTCAATTTTGTCCCAATAGATACATCGACTACAGTGGCCTGTCTGTCCACTTGAAACGACATGAAAACAGAAAGGATTATAAGTGTGACAAATGTGACCGAAGTTTCTACGACAAAAGAATACTTCTTAAGCATATATCTGTAGTACATAATCACGTGTACAATTTCATCTGTGACTATTGCATGAAAGCGTTTAGTACTAAAGCAAACCTTCTATGTCATATACAGAGACTACATAGTAATATAAAGAAAGGTACTGCATGTCCTCTTTGTAACATGGTTTTAAGCAAAAATAGTATTAAAAACCACATAAAAGTTGTGCATGGAAGAAATAAACAGTTCACTTGTGATCATTGTTACAGCCAGTTTGCAAATAAGTCTAGGTTAATAAAGCATATGGTAGTGCATTATAATGTCAAAAATAAAATCAATAAAGTTAAAGTTTGTGAGAGCGTGGGACGACGCGCGTCGAGGACGTACGGCGCCGCGCCGGCCGCGCCGCTCGATACGCACGGCGCGCGCGTACCGCGCGTCACCGACTCACCCCAACCAACAGTTCACTACCTCACTCGCATTCCGACATTATCCTCGAAATAA
- Protein Sequence
- MKPVLPEVQIEKVHKCGRCAKTFLDVNELNTHIKSHDNSLYEHAANAYVKIEKVDILECDICRHAFLTKSALLLHMLEHKHKSDKKSMHQKISNDSNGNTTIDKPYKCPECDYRFVAKSTLQAHSIIHEPFPHNCHCSIGFYRLIDLKHHKKLVHTKLKKEKNLKENSIKKSNDTIKVKFPFKNKKAKEHTKLAKEKKKKGNDPIKKTNDSIKVNLPFKNKKGKEHTKLESEKELEENNSIKISNDSLKVKLPFKNKEGKEHTKLETEKELENNSIKKTKASIIVKIPFKNKKSKELKIPVEIKEKVKHPELAEAMKIALSKVSLTPLDLDIECVGDKYQCPECLKWLASKRYVEVHYRSVHRGERPYSCHICNKSFSKIAGLRLHIKPHLGIKDNKCDYCDKAFINLGKKVKHERTHTGYKPYVCSFCDKAFSEQNSCTLHERIHTGDKRYLCQFCPNKYIDYSGLSVHLKRHENRKDYKCDKCDRSFYDKRILLKHISVVHNHVYNFICDYCMKAFSTKANLLCHIQRLHSNIKKGTACPLCNMVLSKNSIKNHIKVVHRRNKQFTCDHCYSQFANKSRLIKHMVVHYNVKKNKKAKEHTKLAKEKKKKGNDPIKKTNDSIKVKLPFKNKEGKEHTKLETEKELENNSIKKTKASIIVKIPFKNKKGKELKIPVEIKEKVKHPELAEAMKIALSKVSLTPLDLDIECVGDKYQCPECLKWLASKRYVEVHYRSVHRGQKVKHERTHTGYKPYVCSFCDKAFSEQNSCALHERIHTGDKRYLCQFCPNRYIDYSGLSVHLKRHENRKDYKCDKCDRSFYDKRILLKHISVVHNHVYNFICDYCMKAFSTKANLLCHIQRLHSNIKKGTACPLCNMVLSKNSIKNHIKVVHGRNKQFTCDHCYSQFANKSRLIKHMVVHYNVKNKINKVKVCESVGRRASRTYGAAPAAPLDTHGARVPRVTDSPQPTVHYLTRIPTLSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -