Temo005162.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352759.1:304357-323176[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00033 0.025 15.5 3.7 1 23 282 304 282 304 0.98 2 11 0.066 4.9 8.3 0.5 1 23 311 333 311 333 0.96 3 11 0.0053 0.39 11.7 0.2 1 23 337 360 337 360 0.98 4 11 0.043 3.2 8.9 5.1 1 23 367 389 367 390 0.96 5 11 1.8e-07 1.4e-05 25.8 0.7 2 23 396 417 396 417 0.98 6 11 0.00043 0.032 15.2 4.7 1 23 423 445 423 445 0.98 7 11 0.00046 0.034 15.1 2.5 1 22 451 472 451 476 0.93 8 11 0.00022 0.016 16.1 0.1 1 23 484 507 484 507 0.94 9 11 0.00046 0.034 15.1 0.5 1 23 513 536 513 536 0.96 10 11 6e-06 0.00045 21.0 3.1 1 23 545 567 545 567 0.98 11 11 1.6e-05 0.0012 19.6 0.8 1 23 573 596 573 596 0.96
Sequence Information
- Coding Sequence
- ATGGAAACATCAAGCTTACATACAGAAGCAGATTTAAAACTAGACTTTGAGCCGGTGACACCTATATGTAGAGGTTGTTTGACAACAAAACGAAGAATGAATAGCATAGTCTTCTCGCAACTCGGAGCATTGTTTAAAGATTTAACTGGAATAAGTATAACAGAATCAGACGGGTTACCGCAGTGGTTATGCTACGAGTGTTCAGCGTTATTAATGAAATGTGTTCGGTTCAAACACAAGATGTTGAAAGCGCACAATACGTTGTATCAATATTTGATGAGGTGTGCACCGTTTCCCATTGAGGCTAATGATGAGGAGTTGACCAAATACGCAAGTCCAACCTTGTCCCAAACCAATGTGTTGTTTTGTGATGTGTCGGGCAGAGGGAAGAATGGATCCTTTGTAGTTATAGAGCATGAGAAGCAACTAAACAATTCAGTACTAGATGATATAGAGTTGCCGGAGACAGAGAAACAAGAGATGGAAGATGTGAAGGAAGAGTTAGGGCTATCTGACTATGAGGATAACATCACTTTAGAAGAGTTCAGGTCGAGTGCCAATAAAATATCTGAGGATGACTTAGAGCTGCTACTGAGGGACAACATGGAGGTAGAAACTGAACTGGAACCGGAACCAAAGAAGAAGAAGAAATCCAAGAAAAAAATACCAAAATTGAAAAAAAATAAAAACCACGAAGAGGACACAGATTATGAAACTTCACAAAGGTCTTCAATAAGGAAACCCATCGAACTGGATCCGAATAAAATACGTATAGTGACATTAAACCCTGAGGAACAGGCGAAGCACAGGGAGGAAGAAAATCTAACCGGTCTGCGTTTTCCATTTCAATGCAGTTTATGTCATAAGGGCTTTAATTTTGAGTCGAAATTGGATAATCATATGAGTAAACATAatccgGCTCGCGGTTCATACGAGTGCAAGCTCTGTCAGATGTATCTCCCCACTTCGTACAGTTTCAACGTGCATAACTTGATACATACTCGACGGTACGAGTGCGTCGAGTGCGGGCGCAGGATGATCGATAGATCTTCTATTATTGATCATTACAGAACACAACACGAAGGTTTAATGACATTGTTCACGTGCAATCTCTGCGGGAAAGTATCCAACAACAATAAGACGCACAGAGGACATATGAGGAACCACCACAGTGGGGACAGACCTAAGTGCGACCAGTGTGGGAAGACCTTCGTTAATAAGGACTCTTTAACGGAACATATGCAGATCCACCAAGGCATCAAAAACTATGAATGCTCCATATGTCTCAAGAGATTCAGGACCAGGACCCAGATCAAACATCATCAGTTGAAGCATACCGATGTCAAGGAGTTCTACTGCGTCGAGTGTGATGTTAGGTTCAAATCGTCACACAGTCTGAGACAACATTTGCAGAAAAGTTTGAAACACAAAGATATGGGGACATTAATGTACCCGTGCACCTCCTGCGACAAACGCTTCGAGACCCCCCGGGCGCTGTCCGCGCACGCCAGCATCCAGCACGAGGGAGTCAGGTCTCACGTCTGTTCCATCTGCGGGGCGGCGCTGGCCTCCCGCAGCTCGCTGGCCAAGCACACGCACACCGTGCACGCGGGCAAGAGGGCCCCGCCCAGGCACGTGTGCCACACCTGCGGAAAAGCCTTTAGGGGTAAGAGTGTGCTAACGAACCACGTGCGCACGCACACGGGCGAGAAGCCCTTCTCGTGCACGCTGTGCGGGCGAACGTTCTCGCAGCAGACAGCCATGAGGACACACGTCAAGTTGGTGCATCTCAAGATACGGAAACAACACAAGATAAAACCGGAACAACCAGTGGTGGAACTTCCCCCACCCCCATCCCCAAAGCTCGAGGTGTTCAAGCCTGAACCTCCCATAGAGTCCTGGAGACAACATGACATATACTTCCAGGTTACTGCTGGACCTTGA
- Protein Sequence
- METSSLHTEADLKLDFEPVTPICRGCLTTKRRMNSIVFSQLGALFKDLTGISITESDGLPQWLCYECSALLMKCVRFKHKMLKAHNTLYQYLMRCAPFPIEANDEELTKYASPTLSQTNVLFCDVSGRGKNGSFVVIEHEKQLNNSVLDDIELPETEKQEMEDVKEELGLSDYEDNITLEEFRSSANKISEDDLELLLRDNMEVETELEPEPKKKKKSKKKIPKLKKNKNHEEDTDYETSQRSSIRKPIELDPNKIRIVTLNPEEQAKHREEENLTGLRFPFQCSLCHKGFNFESKLDNHMSKHNPARGSYECKLCQMYLPTSYSFNVHNLIHTRRYECVECGRRMIDRSSIIDHYRTQHEGLMTLFTCNLCGKVSNNNKTHRGHMRNHHSGDRPKCDQCGKTFVNKDSLTEHMQIHQGIKNYECSICLKRFRTRTQIKHHQLKHTDVKEFYCVECDVRFKSSHSLRQHLQKSLKHKDMGTLMYPCTSCDKRFETPRALSAHASIQHEGVRSHVCSICGAALASRSSLAKHTHTVHAGKRAPPRHVCHTCGKAFRGKSVLTNHVRTHTGEKPFSCTLCGRTFSQQTAMRTHVKLVHLKIRKQHKIKPEQPVVELPPPPSPKLEVFKPEPPIESWRQHDIYFQVTAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -