Temo011368.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352757.1:2776539-2802142[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.021 1.6 9.8 3.8 2 23 77 98 76 98 0.95 2 16 0.72 53 5.0 1.2 1 23 110 134 110 134 0.89 3 16 4.2e-05 0.0031 18.3 0.4 2 23 141 164 140 164 0.97 4 16 0.041 3 8.9 0.2 1 23 170 192 170 192 0.93 5 16 0.002 0.15 13.1 2.9 1 23 198 220 198 220 0.98 6 16 0.16 12 7.1 0.0 2 21 231 250 231 251 0.90 7 16 0.034 2.5 9.2 0.2 1 23 330 352 330 352 0.96 8 16 1.2 90 4.3 7.2 1 23 359 381 359 381 0.95 9 16 0.00082 0.061 14.3 1.8 1 23 424 447 424 447 0.95 10 16 0.00011 0.0082 17.0 0.6 1 23 454 477 454 477 0.98 11 16 0.0065 0.48 11.5 0.2 2 23 499 521 498 521 0.96 12 16 0.0013 0.096 13.7 1.2 3 23 548 569 547 569 0.94 13 16 4.7e-05 0.0035 18.2 0.3 2 22 576 596 575 596 0.94 14 16 8.6e-05 0.0063 17.4 1.4 1 23 603 625 603 625 0.98 15 16 7.2e-05 0.0053 17.6 0.1 1 23 631 653 631 653 0.97 16 16 0.00023 0.017 16.0 0.7 3 23 661 682 659 682 0.95
Sequence Information
- Coding Sequence
- ATGATAAAGACTGAGGTTAAGCAGGAGACTGTGGACAGCAGTGAGGACGAGATCTGGATCGTGCAGACAGCTGACATGGAGAATAGCCACGATCTGGCGAAACTTCTAGGAGGTAACAAGAGAGCACAAGGTCGCACTGCACCCCATTCTTCAGGAGACAACGATCTTTTAATTACGCGTCCTAGGAAGCGTCGTAGTAAACAGCCGACGTGCAACCCACAGATAGTGACGTGTCATAACTGCAATGAGTCCTTTACATCCAAAGTGCGACTTAAATTTCATATGCAATTCCACGAGAACACAAACCTGATGACATCAGACGGTCGCTACTCGTGTTCGGAATGTTCTGGAGCCACCTTCTCCACGGAGACGGAGCTCTTCGACCATGTGCACTTCCAGCATGTCAAGCAGAAGCGGTGGCAGTGTCCTGTTGAAGACTGTGGGAAGACTTTCTTCTTGAGGGCAACGTTAACGAAACACAGTCGCACACACACAGACACGCGACGATACGTATGCGTGACGTGTGGGAAACGATTCTTGGACAAGCAGACCTTGGATGAACACGGTGTCACGCATTTAAGGATCAAGCCGTTCCAGTGCCACATCTGCCTAAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGCCTCGTGCGCGTGTGCGCCGTGTGCCAGCGCGCCTTCAGGGACCTGGCGCATGCGCAGGAGCACGCAATGAAGTCATCAGAATGTATAGAAGCTTTTGCCAACGAGCTGAAGGAGGAAGCTGAGGAGGTGATGGTTCAGCTGTCTCCCACCAGTGGGCTTGTCAGACACACCGTGCAGATTGTTGAGTCTCCAACGTTATCGAAGCCCATCAAACGTCAAGTGACCAATGAAGTGGGTGAACCTCTACTAGCTCAGCTGGCTGATGAAGCGCGGGCTCTTATTAGAGTGGTTGAGATTGAGAAGGCGTTTAGATGCGAATATTGTGAAGACGTGTTCTACTTGGAGAGCGGGTTGAACAACCACCGCGTCATACACAAGGGGGTGAAGAATCCTTTCACGTGTCATATATGCAAAGTGAGCTTCGCGACATATTCTAGGTGTACAACTCACAAAACGACTCACGGCTTCTACAAACGATCCCTGGCTGACGCCAAGAAGCAAGCTGACGGTTCCACCAACCAGAAGGAGTCAGGACCCTCGTCAGCAACTGGCATTCTTGGATATGGTGATTTTCCAGTCGTTAAGCATTTCTTGTGCGAAGATTGTGGCCGATCATATTTGCATTGGACATATCTACAAGTACACCGTCGAATGAAGCACATTAACGAGAAGTTCCTATACAAATGCAATCAGTGCGAAATTACTTTTCCAAACAGTTGGAGTTTGGCATACCATCGTAAGAAAGTACATGGTAAAACTAGCCCTGACGACCCAGGCACTAGTAATAAGACCACCAGAGATGATTACAGGATCCCATGCCGAGATTGCGACGAAATCCTACCAAACAAGACAGCCCTTTATAAACATAGGAAAAAGGAACATAGTGATAATAATATATCTGCCACAAGAACGAACAATAATATGAGTACATATGGGGGTGAGACCAGCACATCAAACGCCTGCTCCTATTGTCCAGCCACCTTCACCCATGCGATGGATCTTCATAAACATGTCAAAGACGTCCACAACCAAGACACAGAGTCAAGTTGTTCCACCTGCGGCAAGACATTCTCGTCCCGCGCCGAGTTGTCCGCCCACTCTCGTACGCAGTGCACGCGGCGGCCGCACGAGTGTCCCGTATGTGGGCACGCCTTCCGCACATTGTCTATGCGCAATGAACATTTGAGGGTCCACACCGGAGAGAGACCCTTCCCCTGTGATGTGTGTGGAGTAGCTTTTAGAAGATCAACGGCGATGCGTAACCACCGTCTAATTCACAGCGGAGTCAGGGCGTGGGCTTGCGGCCGATGTCCCAAACGGTTCCGCATCAGATCTGACCTTCGAACACACTTGAGACTTAAGCATCCGGCTACTTTGCTAGTCTTTGAGATGGAAGGTTTAAATCCGTCTCCGGACGAGGTTATGAAGCACTTGGCAATGCACAACATATCTCATGACAGAATAATTGAGATCACCAAGATATCATTCGCTAAGGGTACTTCGAACGTGGTACCGAACAGTGCACGTGCCCTGTCAGCCCTCGGAGACGTGCCACGCTCACACGTTGTCTGCGGGAAACCTGCTCCACCACCTACATTGGACGAATTCCAACCCGCTCGCCGCGGCAGAGGCATAGCGAAGAACCCCCGACGTCCCAAGATCTTGCAGAGGGGCATCAACTCCCAGGACTCTGCGCAGTACCCCCTCGCTGTCAGCGAATTGTCAGATATGAATCTCCAGCTGCTTTTAAGAGATGGCGTTTTGGTCAATGGAAATCAAATGATGCAGCTACAGCTGGATGATCCTATGCTGCTGGAGTAA
- Protein Sequence
- MIKTEVKQETVDSSEDEIWIVQTADMENSHDLAKLLGGNKRAQGRTAPHSSGDNDLLITRPRKRRSKQPTCNPQIVTCHNCNESFTSKVRLKFHMQFHENTNLMTSDGRYSCSECSGATFSTETELFDHVHFQHVKQKRWQCPVEDCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLRIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCQRAFRDLAHAQEHAMKSSECIEAFANELKEEAEEVMVQLSPTSGLVRHTVQIVESPTLSKPIKRQVTNEVGEPLLAQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGSTNQKESGPSSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHINEKFLYKCNQCEITFPNSWSLAYHRKKVHGKTSPDDPGTSNKTTRDDYRIPCRDCDEILPNKTALYKHRKKEHSDNNISATRTNNNMSTYGGETSTSNACSYCPATFTHAMDLHKHVKDVHNQDTESSCSTCGKTFSSRAELSAHSRTQCTRRPHECPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWACGRCPKRFRIRSDLRTHLRLKHPATLLVFEMEGLNPSPDEVMKHLAMHNISHDRIIEITKISFAKGTSNVVPNSARALSALGDVPRSHVVCGKPAPPPTLDEFQPARRGRGIAKNPRRPKILQRGINSQDSAQYPLAVSELSDMNLQLLLRDGVLVNGNQMMQLQLDDPMLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01198065;
- 90% Identity
- -
- 80% Identity
- -