Basic Information

Insect: Trisateles emortualis
Gene Symbol: -
Assembly: GCA_947095525.1
Location: OX352745.1:7109960-7123397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.064 4.7 8.3 0.9 6 21 14 29 10 30 0.90

2 14 0.023 1.7 9.7 0.1 2 21 36 55 35 56 0.93

3 14 6.3 4.7e+02 2.1 0.3 1 12 213 224 213 233 0.89

4 14 2.9 2.1e+02 3.1 0.1 1 19 358 376 358 376 0.96

5 14 6.5e-05 0.0048 17.7 0.2 1 23 383 405 383 405 0.98

6 14 2.7e-06 0.0002 22.1 1.3 1 23 419 441 419 441 0.99

7 14 6 4.4e+02 2.1 0.2 1 8 466 473 466 475 0.93

8 14 2e-05 0.0015 19.3 0.5 3 23 495 515 493 515 0.97

9 14 0.0038 0.28 12.2 2.4 1 23 531 553 531 553 0.98

10 14 1.4e-06 0.0001 23.0 4.5 1 23 559 581 559 581 0.98

11 14 0.00052 0.038 14.9 5.2 1 23 587 609 587 609 0.97

12 14 1.9e-06 0.00014 22.6 0.4 1 23 615 637 615 637 0.98

13 14 0.00077 0.057 14.4 0.3 1 23 641 663 641 663 0.98

14 14 0.00063 0.046 14.7 0.1 1 23 671 694 671 694 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.064	4.7	8.3	0.9	6	21	14	29	10	30	0.90
2	14	0.023	1.7	9.7	0.1	2	21	36	55	35	56	0.93
3	14	6.3	4.7e+02	2.1	0.3	1	12	213	224	213	233	0.89
4	14	2.9	2.1e+02	3.1	0.1	1	19	358	376	358	376	0.96
5	14	6.5e-05	0.0048	17.7	0.2	1	23	383	405	383	405	0.98
6	14	2.7e-06	0.0002	22.1	1.3	1	23	419	441	419	441	0.99
7	14	6	4.4e+02	2.1	0.2	1	8	466	473	466	475	0.93
8	14	2e-05	0.0015	19.3	0.5	3	23	495	515	493	515	0.97
9	14	0.0038	0.28	12.2	2.4	1	23	531	553	531	553	0.98
10	14	1.4e-06	0.0001	23.0	4.5	1	23	559	581	559	581	0.98
11	14	0.00052	0.038	14.9	5.2	1	23	587	609	587	609	0.97
12	14	1.9e-06	0.00014	22.6	0.4	1	23	615	637	615	637	0.98
13	14	0.00077	0.057	14.4	0.3	1	23	641	663	641	663	0.98
14	14	0.00063	0.046	14.7	0.1	1	23	671	694	671	694	0.96

Sequence Information

Coding Sequence: ATGGGAGGCCATCAGATAGATTTGTTATGTCCTCTTTGTTGTGACAAAACATTTGACTCCAAACAGTCACTGTTTGATCATTTAAATTATGTTAAAAATAATTTATATTGCTCTCTTTGTAATAGAAAATATAATACATTAGATGGTCTTTTAGAACATTTAAATCTGTATGATTGCCAGACTGCACAAGATGATACTGTTCAAAATATTGTTATTTATGAACAAGGTGTACATGTACAGAACATAGAAAATTTAAAGGATAGTAAAGACGATGATATAAATGCACTCACTGAATTAAATACAACAAATACTGGCACTCAGTATATAACAGATGAAACTTACACATGTCAGGACAGTACTGGTGAAGTCAGCAAAATGTATGTAGAATTGTTAAATAGTAAACAAATGTCCAAGCCAGTACTAGAGACTGGGGAACTGAAACTAATTAAAGACGAAGGAGAAAGTCGTTACATGATAGTAACTCAGAATAACGGTGAACTGCAGGAAGATACAGCGGTGTTAACCAAGCAAAACCATGATGGTACTATATCTCTGACAACTGTTAAAGATGTAAAACTAGAATCGGAAACGCTTATAGCTCCGGAACCAGATTCAGGAAATAACCAAGAAGAGACTTACAGTTGTAATGCTTGCAAAGTTTCCTTTACATCGGTTATAGATCATATACAAAATTACCACAACGATCAGGAGGTTGTTATTGAGGATATAATACCTATGGATTTTGATTCAATGGAAACAGAGGAAGCATTGACAACAACTGATAATAAACAGGCACCAAGGCGAGTGATAACAGATACGGGTGATATTGTTGAAGAGCCTGTTATATTTAAAGCAGAAAATACGGAGATAGCACAAAATACAATAGATGAAATCATAAAGCACCCTAAACTAGTACTGGACAAGCAAGGTCGAGCATACACCAAGCGTTATGTGCAAATCGATAAACTTGAGAACGTCAACAACACTCCGACTAAAGCAGCGAAATCGGATCCCTCTCACAAAGTGGTACCAAAGGAGCTACTTTCAAAAACCGGATTCACAGTCAAAATGTATAATTGTATGTCATGCAATATGAACGTTAGCAACCTGGATGAGTTATTAACTCACCCCTGTAAATCATTGAAATATCCTTGTACCCGCTGCCCTGCGGCTTATTCCAACCCGATGTCGCTATGTGCACATATGAAAGTACACAAAACAAAACCAGACGGTAGTCCTGATGTTCCTGTATCTTATGAATGTAAAATATGCAACACAGTGTTCCCAACAAACAAGTCCTTGAAACTACATAAACGGATGCACGATCCTGTCAAAATACGTCCAATAGAGCCGCCAGTCGAGAACACCGACGGCACAGATACTAACCGAAGTCTTTATCGCTGTAATATATGTGAGAAACTGATACCATTCGATTACCGCACTGTACATGAGAATTCACACAAAGCAGGCGACAAGATGAACTGCAGTATATGCAACAAGAAGTTTACTTCCATAGAGTATCTGGAAATGCATATGAATGTACATAATTTAGATAAGGTGACAGTGAATAAACCGGATAAAAAGCTTCCATACAATTGTTTATACTGCAGCAGAAAGTTTGCGAGACCGCACGAAAAAGTCAAACATGAAAGAATTCACACTGGCGAGAAGCCCCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTACACATGCGCACGCACACGGGCGCGCGCCCGTACGCGTGCCCGCACTGTGGCAAGAGGTTCAAAGCGCACAGCGTATACAATCACCACTTGTTGACACACTCGGAGGTGCGCGCCTACAAGTGTCCCTACTGTCCGAAAGCTTTCAAGACGTCTGTACAGCTCGCCGGACATAAGAATTCTCACACCAAGCCATTCTCATGCCAACAGTGCAACAGACCGTTCGCGTCCCTGTACGCGGTGCGCGTGCACACTGAGACCCACTCGCGCCAGAACAACCTCAAGTTCTCGTGCTCGCTGTGCGGCGCCAGCTACGCGCGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGCGCACCAGGACAACCAGGACCACCACGCGCACGACTCTCTACTTGATAATCGAGACGACAACTGGATGTCGCGTGAGAATACAACAGATACGGTGTCAGAGTCTCTCGACAAGGAATTGCAAGAAGAAATAACTGATTTAGAAATGAGTACCAACGAATTGATAGTTCCTTAA
Protein Sequence: MGGHQIDLLCPLCCDKTFDSKQSLFDHLNYVKNNLYCSLCNRKYNTLDGLLEHLNLYDCQTAQDDTVQNIVIYEQGVHVQNIENLKDSKDDDINALTELNTTNTGTQYITDETYTCQDSTGEVSKMYVELLNSKQMSKPVLETGELKLIKDEGESRYMIVTQNNGELQEDTAVLTKQNHDGTISLTTVKDVKLESETLIAPEPDSGNNQEETYSCNACKVSFTSVIDHIQNYHNDQEVVIEDIIPMDFDSMETEEALTTTDNKQAPRRVITDTGDIVEEPVIFKAENTEIAQNTIDEIIKHPKLVLDKQGRAYTKRYVQIDKLENVNNTPTKAAKSDPSHKVVPKELLSKTGFTVKMYNCMSCNMNVSNLDELLTHPCKSLKYPCTRCPAAYSNPMSLCAHMKVHKTKPDGSPDVPVSYECKICNTVFPTNKSLKLHKRMHDPVKIRPIEPPVENTDGTDTNRSLYRCNICEKLIPFDYRTVHENSHKAGDKMNCSICNKKFTSIEYLEMHMNVHNLDKVTVNKPDKKLPYNCLYCSRKFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQQCNRPFASLYAVRVHTETHSRQNNLKFSCSLCGASYARAFALKDHVKQAHQDNQDHHAHDSLLDNRDDNWMSRENTTDTVSESLDKELQEEITDLEMSTNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -