Temo019873.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352750.1:11969466-11986251[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.4e-05 0.0018 19.1 6.8 1 23 196 218 196 218 0.98 2 13 2e-06 0.00015 22.5 0.3 3 23 232 252 231 252 0.98 3 13 5.1e-05 0.0038 18.1 2.1 2 23 261 282 261 282 0.98 4 13 4e-05 0.003 18.4 2.0 1 23 288 310 288 310 0.98 5 13 6.2e-06 0.00046 21.0 1.4 1 23 316 338 316 338 0.98 6 13 1.7e-05 0.0012 19.6 8.4 2 23 345 366 344 366 0.97 7 13 3.8e-05 0.0028 18.5 0.8 1 23 372 394 372 394 0.97 8 13 1.3e-05 0.00096 20.0 1.7 1 23 400 422 400 422 0.99 9 13 9.1e-05 0.0067 17.3 1.2 1 23 428 450 428 450 0.99 10 13 0.00065 0.048 14.6 1.3 1 23 456 478 456 478 0.97 11 13 1.8e-05 0.0013 19.5 2.3 1 23 484 506 484 506 0.98 12 13 4.9e-06 0.00036 21.3 1.2 1 23 512 534 512 534 0.99 13 13 0.00012 0.0088 16.9 2.6 1 23 595 617 595 617 0.98
Sequence Information
- Coding Sequence
- ATGGCTGCTTCTGCTATTGCCAATAAACTTCAAACTTTGAATTTCGACAAAATATGTCGAGCATGTTTGGAGATAAAAAAGGATATGAGACCTCTGTTCGAGCAGCTGACTGCGACAATGCTGATGGGCATTTCCAAAGTGCAGGTGGAAGTAGGAGACGGTCTGCCTTCTCAGCTATGTTTGCAGTGCGTGCACCAGATATCGCGATGCCATGCCTTCAAAGATATGGCGGAGAGAAACGACGTCGCGCTCCGGCTACACGCCAAGGTGCTTGCTGAGCAGGCCTACAAGAGAGAAAAAGCGGAGAAAGAGGATCTGCTGAACATTAATTGTACGGAGCCATATATACAATACATGGAAGTGCCTATAACCAACACTAGTCAGATCCTCGATGGGTTCTTCAACGCGACGCCTGAACATACACCCACATCCGTATCTGAAGAAGAGGTCAAGGATAACTTCGATAATCTAAAGCATGAACCGACGCCTGCTTCATCGAAAGACAAAGATGGCTTAAACTCGGACGAGGAGAATTACCTTCAGCTGGTGGTGTTCCAAGCGACATCGACGGTGTCCCCCGGGCGGCACGTGTGCAACCTCTGCCACAAGGAGTTCAAGCACCCGCGCTGGTTGAAGCAGCACATGAGATCACATACTAACTGGATAAAAGCGAACTGCAAGAAGCCACCCATGTGTCCGCTTTGTGATAGAACTTTTAAGGGTCCGGGCATGCTCAAGATGCACATGCGTACTCACGAGCAGCGCCCTCCAAAACAACCCACTTGTTCGGTGTGCCAGCGAACTTTCCCGACCAAGACATTACTCTACCGTCATAGACAAACTCACTTTGAGCAGAAGACCCACCAGTGCACGGTGTGTGACAAGAGATTCTATAGCGGCTACGCGCTGAGGTCGCACATGGCCAGGCATCGCGGGGAGAGGCCTTATGTATGTTCGACTTGCAATAAAAGCTTCTACAACCCTACGGACTTGAAGGTGCATTTCCGCCTCCACACCGGTGAAAAGCCGCTAAAATGTTCCGAATGTAACAAAACATTCCGTCGTCACTCGACGCTGTGCCAGCACATGAAGAAGCACCGCGGCATAAGAAACCATATCTGCACAGTGTGCAACAAGGGCTTCTACGAGGTGTCCAAACTTAACGCACATATGAGGGTGCACACCGGTGAGCGCCCTTACGAGTGTCAGTTCTGTTCGCGCAAGTTCGCGCAGCAGTCGGCGCTGATCTACCACCGGCGCACGCACACCGGCGAGAAGCCCTACACCTGCAAGCTGTGCTCGGCGCGCTTCACCACCTCCTCCGCCAGGAACAACCACATGATCACTCATACTGGGAACAAGAGGTTCGTATGCCCGGTGTGCTTCAAGGGCTGCACGTCCCGCACAGAACTGCGCGTGCACGCGAGCAAGCACACGGGCGAGAAGCTGTTCGAGTGCTCGCACTGCGAGCAGCGGTTCAGCTCGGCGTCGTACCTCGCCGTGCACCGGCGGTACCACACCGGCGAGACCAAGTACCAGTGCGTGGAGTGCGGGAAGGGTTATATGGAATCGAGCTCGTTCAAGAAGCATATGAAGACTCACGCTAAGCCAGAGTCGTCCAACTCTGAGAACAGCGCGGAGAGCCAGCACAAGAACGACTCGAAACAATCTACTGACGACCAGGAACAAGTACAGCAACAAGCGCAAACTCAAGTTCAAATCCAAGTACAAGCCAATGAGCAAGTCCAAGGTCAAGCCGAGGCCAGCACGCCGCAGAAGAAATACAAATGCGGTATTTGTGTCAAGACATACATGTACCTGCACAATCTTAAGAAGCATATGTTGCTGCACGCGCAAGAACGTGCCCGCAACCCTGAACAAGTAATCTTCCTCCAACAACAGCAGCAGCAGCAACCTCAACAACAACAACAGCAGCAGTCCCAGCAGCAACAACAACACCAACAGATGCAGCAGCACCAGCAAGTTCAAGTGCACCAACAACAGGCTCAAGTGCAGCAGCAACAGGTACAACAACAACAAGTGCAACAACACCACCAACAACAGCAGCTGCAACAACAGGCGGTGTTGCAAGTAGGCAACGTGCAACACCAGCTCGCCGTGCCGATACATGCCCAGCACGTGCAGCAGGGGATCACTGTCTCGGGAGTGCAGGGTCAGCACCCGTACCCGGTGATCTCGTCAGTGCAGTCGCTACAACTACAACAAACACAACAACAGCAACAGCCGCAGCAACTGCAAGTGCAAACGATACAAATCCACCCACAACATCAACCTATACAGATACATGCGGTGGGTGTACAGCAGGTGCAACAGCAACAGTTGCACGTGGCCACCTCCTCGTGCCAGACCATGCTGCCCAACATATTACAGTTACAACCGGCGACAGTGGCAGTGTCTGGGCTGAGCCAGCAGGAGCTGGGCGGAGTGACGCACCGCATCATCCTGCAGCCGCAGCCCTCGGCCACGCACCCCGCCGTCTACACCATACATCACTGA
- Protein Sequence
- MAASAIANKLQTLNFDKICRACLEIKKDMRPLFEQLTATMLMGISKVQVEVGDGLPSQLCLQCVHQISRCHAFKDMAERNDVALRLHAKVLAEQAYKREKAEKEDLLNINCTEPYIQYMEVPITNTSQILDGFFNATPEHTPTSVSEEEVKDNFDNLKHEPTPASSKDKDGLNSDEENYLQLVVFQATSTVSPGRHVCNLCHKEFKHPRWLKQHMRSHTNWIKANCKKPPMCPLCDRTFKGPGMLKMHMRTHEQRPPKQPTCSVCQRTFPTKTLLYRHRQTHFEQKTHQCTVCDKRFYSGYALRSHMARHRGERPYVCSTCNKSFYNPTDLKVHFRLHTGEKPLKCSECNKTFRRHSTLCQHMKKHRGIRNHICTVCNKGFYEVSKLNAHMRVHTGERPYECQFCSRKFAQQSALIYHRRTHTGEKPYTCKLCSARFTTSSARNNHMITHTGNKRFVCPVCFKGCTSRTELRVHASKHTGEKLFECSHCEQRFSSASYLAVHRRYHTGETKYQCVECGKGYMESSSFKKHMKTHAKPESSNSENSAESQHKNDSKQSTDDQEQVQQQAQTQVQIQVQANEQVQGQAEASTPQKKYKCGICVKTYMYLHNLKKHMLLHAQERARNPEQVIFLQQQQQQQPQQQQQQQSQQQQQHQQMQQHQQVQVHQQQAQVQQQQVQQQQVQQHHQQQQLQQQAVLQVGNVQHQLAVPIHAQHVQQGITVSGVQGQHPYPVISSVQSLQLQQTQQQQQPQQLQVQTIQIHPQHQPIQIHAVGVQQVQQQQLHVATSSCQTMLPNILQLQPATVAVSGLSQQELGGVTHRIILQPQPSATHPAVYTIHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01094252;
- 90% Identity
- -
- 80% Identity
- -