Basic Information

Gene Symbol
-
Assembly
GCA_947095525.1
Location
OX352747.1:16690089-16701410[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-10 1.7e-07 31.6 1.4 1 43 11 55 11 56 0.94
2 2 0.073 55 4.4 0.0 11 29 1040 1058 1037 1075 0.82

Sequence Information

Coding Sequence
ATGACAAGTGCAGTGCATAAAACGTATACGAGTAAAGTTTGGACATACTTTGTAAAATCAGATGATGACTTGACTGCCAAATGTAAAATGTGCAATTCGGTATTGAAAACTACTGCTAGATCTACGAGTACAAAGGGATTACACGTCCATTTAAAATCAAAGCACGGAATACAAGATTTGAGTGGCAAAGCAGCAAGTTCGGGTTCGGAGTCTTCGGAGTCGGGGGCGAAGCCGGGGCCTTCTTTTGACGCAGGTTCGTCTCTTCAATCTCCTCCGAATAAAAAAGTCAAGATCTCAGACCATTTTCCTGTCCAAAATAGAATTTCTATGGAAGAAAAAGTGGCTCGTATGGCCTCTAAAGACGGAATACCTTTTCGTGTATTTGCTACGTCATCTGACTTAAGAGAACTTTTTAAAGGTGACGGGTACACTTTACCTAAATCTGAAACGTCAATCCGATTGATGGTGATGAAGTACGGAATGACCCTTAGAATGAAAATAAGACAAGATTTATCCGAACTTAAAGAAAATGGTAACCGTTTTTCTTTGACATTTGATGAATGGACATCGTCGAGTAACAGACGTTTTATTAACATAAATATACATGCTTTTGTGAATTCCAGTCCAACGTTTTGGAATTTAGGTCTGGTTAGAATATTTGGTAATATGCCAGCTGAAGTTTGTGTAGAAATTTTGAGAAAGAAGATCTTGGAATTTGACATCAACCTAGATACAGATATTGTTGCAATTACAACAGATGGTGCGGCAGTAATGATTAAAGCTGGTAAATTAATTTCCTCAAATCATCAACTCTGCTATGCCCATGCTTTGCAGTTAGGAATTCTAGATGTTATTTATAAAAAAACAACTATCGCTTCAGATGGCGAAGCAGAACCGCCAATTTCAACATTGACAGACGAAGTTTCAGAGTACCCCAGCCAAAGCACGCCAGAGGCGCCAGAGCCAGGCTCTGTAGATGAAATGGGTTCACAAAATGATAACGACTTTTTTAATGTTACAATTTGCCCAAATATTGAAGCTGATCTAGCCCCGAACTTCAATAATATTATTAAAAAAGTACGCAAAGTGGTGCACATGTTTAGGAATTCACCAACAAAAAACGACAAACTGCAAGATTACGTCAGGAAAGAGTTTGGGAAAAGTTTGCAGTTACAAGCAGACTGCAAAACCCGATGGAGCAGCCTGGCTAATATGGTTGAAACATTTAATAAATTAAAACTGTGCATCGCTAAAACTCTCATCGACTTTGGTCTTGGTAGTAACACAGAATACTGTTTTTCAGAGGAAGAGCTAACCACATTGTTAAAACTGGAACAAACACTCAAACCTGTCAAGATTGCTGTTGAGGTTCTCTGTCGTCAAGACGCTAGTCTTTTAACAGCAGAAACAACATTGAAATTTATGATAAATAAACTAGATGATCTCAAATCGACTTCGTCGTTAGCTGCCGAGTTAGGTGTTTCCTTGCGACGACGTATTTCACAGAGAAGAACCAATTTGACTGCGCTGATGATATATCTCCAAAATCCTGGTGGTTACCGCCAACTCCAGCAAGATTCAGCCTCGGAAGAAGATGAAACCTTTAGCTTGCCGCCAAAAAGTGTGCTTAGAAAGATTATAAAGGAGTTAATCCAGAGATTGAATTACAGCGTATCACTTGACGAGAAATCAAGAAATGATATTGAAGATCAAGAAGACGACCTACCGCTCTCTGTTCTTGGAGCGAATGAATCGGCACAAATCGATGAAGACAACGAACCCCGAGCTCTCTCTCTGCAAGAGGAATTAGAACTTACCTTGGCTTCAGTTGCTTCTCCTAGGCGCACATTGTGCCAAATCAATTCTATTGACTCCATCATAAAAAAAGAGATGACTTTGTATGAATCTGGAGGTTCTGGACTTACTTCAAATAGGAACTGTGCTAATATCGTGCAAGAGAGCCAATCTGTAGAATCACTGTCCATCAAAACAATAACAAATTATAATTTACGAGATCTACCAAAGAAAAAATACGCTGATTGTGATAAAGATGTGAGTGATGCTGATTTTTCTCCAGATTGTTCAGAATATGTTCCAAGTCCAAACAGGAATGCAGTCAATAGCCCATCAAGTACGTTTTCGGGTCATAGCGTAGATTCCCAATGCATAGATAGAATTTTGAACACCTCAAAAGTAATTGATACTCCCTCTACTATTTCGAATTTATCGCTACTTTTAACGAACAGCGATTTCATCGCTTCTTCTACCACCATTTATAAAATAAATAATGAACATAGTTCTACAATTGATGCTGTCCAGTACAATAAAGAAAAGCAATTTGCAAATTTAAGTTTAGTACCTAGTTATCCTTTAGCCGAAAATCTGTCAATTGGAGAACTCGAGGAAACATTGCAACCTGAAAGCTCCCCCGAAGTTAATAAAACTGATGTCAACATGTCTGTTGATATCACACTAACTGATAGTTCCCAAAATGAACATCCCAATTTTAGAACTGAATTAACACAACATTCATTAGAAATTGAGCCAAGTAATTCAGACGAACCTTCCACATCACACAATGAAAAAAAAAGAACCAGAAAACGTGCAATTAATGAAGACCAGTGGTCTAGCAAAAAAAAAAAATTACTGAAAAATGCTGGTCAGGCTTACGAAGACGAGTCGCAAGAAAATGCATCACACGTAGAACCCAATATTACAAATCGAGAATTCTCCCCTGAACTCATACCTAGAAAACCTTTTAGTCCACTTTCCAATAACTTGAATAGAGAACCTCAAAATAGACCGCTTTCTTACACTTCGCCTTCACCAAGTACCAGTCACCAGCGCTTTTCTCCAGAAGCAGTGCGTCCACTACCTAAGGCGCCGCCTCGAAAAACGACCAATCGTGGAAGAAAGAAGAGGCAAACAGCTATATATACTGACACACCGGAGAAGGACGCTATACAGAAGGAAGCAGAAGAAGCCGAAAAGAAGAAGAGGGCCAAACAAGTCAAAAAGGATTTAGGAAGCTATGAACAGGGTAAAGGTAAAGGAAAGGGAATAGGGAAAAGTAGTAAACCAAAAACTTTGAAAAAGAAAAAAAATGATCCTAAGAGTTCTGAAGACGAAGAAGAATGGTTTTGTGTTTTATGCATGGAGCCATATAGTAGAAGTCGCCCTAACGAAATTTGGGTTCAGTGTTCGCAATGCGGGATGTGGGCACACGAAGAATGTACGCCACAGGAAACTAATTATATATGTCACAACTGTGAATCTGATAAATTTTTTTTCTTCGTTTTTTgcagtagCCAAAGTGTTAAATGCATTCCGCCCACTAGTGTAGAAGCCGAGAGGGCTTTTTCAGCTGCCGGATATTTAGCTTCACATATTCGCTACAGCCTGGCAGATGATAAATTAGATACATTATGTATCTTACGAAAACATTTCCAAAAAAAATAA
Protein Sequence
MTSAVHKTYTSKVWTYFVKSDDDLTAKCKMCNSVLKTTARSTSTKGLHVHLKSKHGIQDLSGKAASSGSESSESGAKPGPSFDAGSSLQSPPNKKVKISDHFPVQNRISMEEKVARMASKDGIPFRVFATSSDLRELFKGDGYTLPKSETSIRLMVMKYGMTLRMKIRQDLSELKENGNRFSLTFDEWTSSSNRRFININIHAFVNSSPTFWNLGLVRIFGNMPAEVCVEILRKKILEFDINLDTDIVAITTDGAAVMIKAGKLISSNHQLCYAHALQLGILDVIYKKTTIASDGEAEPPISTLTDEVSEYPSQSTPEAPEPGSVDEMGSQNDNDFFNVTICPNIEADLAPNFNNIIKKVRKVVHMFRNSPTKNDKLQDYVRKEFGKSLQLQADCKTRWSSLANMVETFNKLKLCIAKTLIDFGLGSNTEYCFSEEELTTLLKLEQTLKPVKIAVEVLCRQDASLLTAETTLKFMINKLDDLKSTSSLAAELGVSLRRRISQRRTNLTALMIYLQNPGGYRQLQQDSASEEDETFSLPPKSVLRKIIKELIQRLNYSVSLDEKSRNDIEDQEDDLPLSVLGANESAQIDEDNEPRALSLQEELELTLASVASPRRTLCQINSIDSIIKKEMTLYESGGSGLTSNRNCANIVQESQSVESLSIKTITNYNLRDLPKKKYADCDKDVSDADFSPDCSEYVPSPNRNAVNSPSSTFSGHSVDSQCIDRILNTSKVIDTPSTISNLSLLLTNSDFIASSTTIYKINNEHSSTIDAVQYNKEKQFANLSLVPSYPLAENLSIGELEETLQPESSPEVNKTDVNMSVDITLTDSSQNEHPNFRTELTQHSLEIEPSNSDEPSTSHNEKKRTRKRAINEDQWSSKKKKLLKNAGQAYEDESQENASHVEPNITNREFSPELIPRKPFSPLSNNLNREPQNRPLSYTSPSPSTSHQRFSPEAVRPLPKAPPRKTTNRGRKKRQTAIYTDTPEKDAIQKEAEEAEKKKRAKQVKKDLGSYEQGKGKGKGIGKSSKPKTLKKKKNDPKSSEDEEEWFCVLCMEPYSRSRPNEIWVQCSQCGMWAHEECTPQETNYICHNCESDKFFFFVFCSSQSVKCIPPTSVEAERAFSAAGYLASHIRYSLADDKLDTLCILRKHFQKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-