Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_947095525.1
Location
OX352749.1:8769450-8788094[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-14 2e-11 44.3 0.2 3 44 541 582 539 584 0.95

Sequence Information

Coding Sequence
ATGAAAGTGTTCATGGACATGAAACCGGGCGGGTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAACGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCGCGTAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCGTCGCTGCTCAGCGCCGAGGTGATCAGGTCACCTTGTGTGTACATTCGGCCGGACGTCGACAAGGCTACTGCTAACAAAGTCAAAGATATCGTTGTTAATCATCAAGGAGAGATTTGTGAGGATGAAGAAGATGCGACTCACATAGTACACCCTACGGTGGACCCCCTGGAGGAGGAGTACGCTCGGCCAGTGTTCCGCCGCTCCAACCACGTGCTCGTGCACTGGTACTATATGCCCGACAGCCACGACACCTGGGCTCAAGTTGACTTGCCTACGGACGTACCAGAGACAGTAAGCTGGGACTGCAATCGTTCAGAACCGTGGCGGGTGTCCGCGTCGTGGGCGCTCGACCTACCGCAGTACAACGAGTGGATGAACGAGGAGGACTATGAAGTTGATGCTAACGGCAAGAAGAAGACTCACAAGTTGCGTTTGTCTGTTGATGACTTGCTCCCGGGCGCGGAGCCGTCCAGCAAGTCGAAGAAAGGTAGTAAGAGAAAACGCTCTCCGTCACCGCCACCTCAGAAACATGGCAAGAGAAAGAGTCGGATAACAAAGCGAAGAGATAATGACGTAGATGAAGAAGAGGATAACGCCTCACGCGACAACACAGACGCTGTACCTACACCGGAGAACGAAAGATCTACCGAAGCGCCGACCGCAGCCAGCGGGGCGAGTGGCAGCAGCGCCAGCGCAGGAGCGGCGAGCGCGGGCGCGACCAGCGAGCCCCCCGCCGCGCCCGACGCGCCCGCCACGCCCGCGCCGCCGCTCGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACACAGGAAATGCTCACTAAAGAAGAATTGGAGGACAACGTAACGGATCAAACCCACCACATAGTAGTGCCGTCGTACTCGGCGTGGTTCGACTATAATTCAATCCACACTATCGAGAAACGTGCTCTACCAGAATTCTTCAATGGCAAGAACAAGTCCAAGACACCCGAAATATACCTCGCTTACAGAAACTTCATGATCGACACATATCGCCTGAACCCTACCGAGTACCTAACGAGCACGGCGTCACGTCGTAACCTGGCGGGTGACGTGTGCGCGATCATGCGAGTGCATGGCTTCCTTGAACAGTGGGGTCTCATCAACTATCAGTTGGAGGCAGAATCTCGTCCGACAGCTATGGGACCACCACCGACCTCTCACTTCCACGTGCTATCCGACACACCGTCTGGTTTGCAGCCACTCGTTACCAGACCTACACAGCCACGTCCCGCGGAGAATGTACCGAAGGTGGAGCCTGGTCTACCGAACGGTGCCGAAGCGGGCGCGGGCGTAGTACCTCCTGCTGCTGCTCCTATCAAGGCTGAACCTCCAATAGACATTGCTGCCGCACCTGGGCTTAAACTCGATCAGTACCGCGGCGCCGGCGTGGCGGGCGCGGCGGGCAGCGGCGCGCGCGGGCGCGAGTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGTGCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCGCGACGCGCCCTCCATGGGCGTGCTGGGCCCGCTCGCCTACCAGCCCATCCCCTTCAGCAAGACCGGCAACCCCGTCATGAGCACCGTGGCCTTCCTCGCCTCCGTCGTCGACCCGCGCATCGCCTCCAAGGCGACCAGGGCTGCCATGGAGGAGTTCGCCGCCATCAAGGACGAGGTGCCGGCCGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGCCCGGCCGCGGCGCTGGCCGCCACCGGCATCGCGGGGACCGCGCCTGAAGTTGTGCCCACGGAGACTAAAAAGGAAGGTCCATCGGAGATCAAAGCTGAACCTATGGAGGTAGAGGAAGGTGAAGCTAAAGTAAAGGAAGAGCCGGCAGAGGCACCTGCCGCTGCTGAAGCTGACAAGGAACCTAAAGACGAACCCTCACCACAACCTGGCAAGGAACAACCAGAAAAAACAGAAGCTCCTGCGACAGTAGACGCTAAACTACAGTCAGCAGCAGCTGCTGCACTGGCCGCAGCGGCAGTCAAGGCCAAACATCTCGCTGGGGTTGAGGAGCGCAAGATCAAGTCCCTGGTGGCACTGCTCGTTGAGACGCAGATGAAGAAGCTGGAAATCAAGTTGCGACACTTTGAAGAGTTGGAAGCAACTATGGAGAGGGAACGGGAAGGTTTGGAGTACCAGCGGCAGCAGCTAATACAGGAGCGACAACAATTCCACTTGGAGCAGCTGAAGGCTGCTGAGTTCCGTGCCAGGCATCAGGCACATCAAAGGTTACAAGCGGAGAGTGGAGCAGGTGGCGCAGCGCCGGTGGCCGTCGTGGCCGCCGCCGGGCCCGTCGCCGCCGCGCCCGCGCCCGCCGGCGCCGCGCCGCCCGCTGACGTGCCCGCCGACGCCGCGCCGCCGCCGCACGCCTAG
Protein Sequence
MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLSAEVIRSPCVYIRPDVDKATANKVKDIVVNHQGEICEDEEDATHIVHPTVDPLEEEYARPVFRRSNHVLVHWYYMPDSHDTWAQVDLPTDVPETVSWDCNRSEPWRVSASWALDLPQYNEWMNEEDYEVDANGKKKTHKLRLSVDDLLPGAEPSSKSKKGSKRKRSPSPPPQKHGKRKSRITKRRDNDVDEEEDNASRDNTDAVPTPENERSTEAPTAASGASGSSASAGAASAGATSEPPAAPDAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGVVPPAAAPIKAEPPIDIAAAPGLKLDQYRGAGVAGAAGSGARGREWTEQETLLLLEALELHRDDWNRVCAHVGTRTQDECILHFLRLPIEEPYLRDAPSMGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPEVVPTETKKEGPSEIKAEPMEVEEGEAKVKEEPAEAPAAAEADKEPKDEPSPQPGKEQPEKTEAPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAGGAAPVAVVAAAGPVAAAPAPAGAAPPADVPADAAPPPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00040769;
90% Identity
-
80% Identity
-