Temo013508.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352729.1:13238466-13239194[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-07 4.4e-05 23.6 0.0 1 41 39 79 39 83 0.90 2 2 5.1 1.3e+03 -0.4 0.0 2 19 165 180 164 182 0.80
Sequence Information
- Coding Sequence
- ATGATTAGGTACATTTTATTACAGATGGCCCTAGTACAAAAAAAAGAAGAGAATGAAACGAAAGGGAAGAAAAAAGGAGGTAAAATACATAAAAAAAGGAAGCTATTTAACTATAAAGAAGAAGATTTACAAAGGGCAATTGATGCCATAAATATTAATAAAATCGGTGTAAGACAGGGCTGTCGTGATTATGGTGTTCCTGGGGCTACTGTTCAAGACAGATTATCAGGGCGAGTTGTGGTTGATCAAAGAAAACCGAGAAAAGTAGGGCCAGATCCAGTTTTAGGTTTTGAAGGTGAAAAGAAAATTGTAGACTGGATAATTGATATGGCTAAATGTGGCATACCAATAACGAAAACACAATTGATAGAGACAGTGAAAAACATTTGCAAAGATACGGGTAAAGATGCAATTTCTTTTACGGGTCAAAAACCTGCGCAGTCATGGTTTAGAGGTTTTTGCAAAAGACACCCCAAAATAAGTATACGTGAACCCGAAGGGATCAACAAAGCAAGAGAATCTGTTATGGAAGGGACGATCAGGAAATGGTTTGAAGATCTTGAAGTGTTTTTATCAGAGAAAAATTTATTATATATGAtgaaggacccagaacgtgtatgcattaagcagatgaaaccggagtgtctctatgtcccaaaactggaaaggtgcttgcaccaaaaggatacaaaaacgtttacactgagggcaacgagaaagaaactataa
- Protein Sequence
- MIRYILLQMALVQKKEENETKGKKKGGKIHKKRKLFNYKEEDLQRAIDAININKIGVRQGCRDYGVPGATVQDRLSGRVVVDQRKPRKVGPDPVLGFEGEKKIVDWIIDMAKCGIPITKTQLIETVKNICKDTGKDAISFTGQKPAQSWFRGFCKRHPKISIREPEGINKARESVMEGTIRKWFEDLEVFLSEKNLLYMMKDPERVCIKQMKPECLYVPKLERCLHQKDTKTFTLRATRKKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -