Temo009478.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352739.1:1407532-1410340[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 4e-06 26.9 0.1 3 39 40 76 38 82 0.86
Sequence Information
- Coding Sequence
- ATGGGATATAGGAAAGCTAAGATCCGAACGCGCGGCATCGCGCGAGCCGCCATCTTGTCAGTAGCCACGGGATCATCATGGTACCTCCTCGTAAAAAAACTCGTACTTTGGTCCCTTGAACAATTGCAATCAgcaatggctgctgtcaaaggagggatattatcacaacgtgcagctgccgtgcagtattctgttcccagaagaacattggtaaaccatctcaagtctggcaaagtcgagaaacaaataggacgccgcactgtcttaaccaaggagcaagaagatgatttagtggtaagaatcatgagacttgcttccgtaggctttcctttaactccaaaagttttacgtcgtcaagcttatgtattttgcgaacagaacaatattgaaaacaagtttaacaaaataactaagcgagctggaaaagattggcgaaacttgtttttgaaaaggcatcctattttatccaaacgaagggttcaaatcctcaatccaggcagggcgcaaaaactcaacaggcctattgtaaaacagcattttgaggagtacaaaaaaatgtatgaagaattgcagatcagagatcatcctcagcgcttgtataatatggacgaaaaaggttgcagacttactatacataatcagccgactgttttagcgcaaaaggggtctaagagagtacatatggttgcagcagaacatgcagaaaatgtaacagtggctatttgcgtcaacgcattaggtaatgctgtaccaccgctggttatatttaaaggaaaacgattaaaacctgaattcactgacaatttaccggcaggatcgttagttaaaatggcagcaaaaggtagcatgactacctcattatttattgattttatccatCACCTAGGGAAGTACAAAACGCCAGGAAAATGTTTGTTAGTATTTGATGGCGCTGCTTGTCATTTAGATTACAAAATTGTTGACGCAGCAGACCAAGAAAATATTGTTTTATACTGCTTGCCATCAAATACTACACATGAACTCCAACCACTAGATAAAAGTGTAAATAAATCGTTTGAACATCACTGGGATGAAGAAGTAATATCATTTAGATATAAGCATCCAGAAAAAAATCTTACAAAGGCGAGATTTAACTGCATTTTTAGTAAAGTCTGGTCGAAATGTATGTCTCACGATAATATTGTAAATGGGTTTAAAGCCACAGGACTTTATCCCTTTGATCCGGATGCAATTCCAATCGAAGCCTATGCTCCTTCTGTATTGACTGAAAGGCCTACAGAGCAAGACCCATGCATTGCTCAATCTCCGCCGGCATCTCCGCTTGCTGGACCTTCCGGTATATCCGACCGATACGTACATCAAAGTTCCGATACCGACGAGACGTTATTTGAAGACCGAAACTCAGGCTCACCGTCTTTGTTACATGAATATAACTCTTCACACACTGTTTTGGATACGGGAATAAATAGACCCATAGTCGATTATAGCTCGACAGACTCGGAATCTGCACACCCGACTCTATCAAATGAACCTAGTACGTCTGGCATTACAGTAAGAAGACCAGTAATATATAGCTCCGACTCTGACATTTCTATTGATGGAAATTTAATTCCACTTCAAAGACGCCAGTCTCAATTTGCATTAAACATTTATAGTTCTTCCGAAGATGAAAATATGTCCCCGTTATCTAAACAACAACGTACTCCGAAGAAACCCGTAGATACCGCGTCGTATGTTAATATCGATGCAATAAGGCAATTATATAGTTCTACTAGTGAGGACAATGAGGATGATATACCATTAGACAGATTAAAAACTAAAGCCACTCAAAAAACTCCATTCCAACAATTGATACCAACACCAAACTTTGCTGTCAGTAAACAAAAACCGCGACGTAAGGCAATCAATTATAAAGGTACAGTAGTGACTAAGGATTTATTTACAGAAAAACATAACACAGGAATTCAGGAGAAAAAGCAAACGGGTGAAATAAAAAGaaaacagcagaaaaaaaaagaaaaaaaatgtacaaaaaaatcacattcaaaatcaagtaatgttgaaaagataaaaggaaaaaaaaagaaaacccacaaaagaagtgtcgatgatgttgatgatgatgacgataaatggtattgccatgcatgcaatacagaaagatttgaagatatgcgacaatgccccctatgcaaaagatggttccatgagatatgcttagggctgacaaaagaggatgattttgaatgtccaatgtgcatgtaa
- Protein Sequence
- MGYRKAKIRTRGIARAAILSVATGSSWYLLVKKLVLWSLEQLQSAMAAVKGGILSQRAAAVQYSVPRRTLVNHLKSGKVEKQIGRRTVLTKEQEDDLVVRIMRLASVGFPLTPKVLRRQAYVFCEQNNIENKFNKITKRAGKDWRNLFLKRHPILSKRRVQILNPGRAQKLNRPIVKQHFEEYKKMYEELQIRDHPQRLYNMDEKGCRLTIHNQPTVLAQKGSKRVHMVAAEHAENVTVAICVNALGNAVPPLVIFKGKRLKPEFTDNLPAGSLVKMAAKGSMTTSLFIDFIHHLGKYKTPGKCLLVFDGAACHLDYKIVDAADQENIVLYCLPSNTTHELQPLDKSVNKSFEHHWDEEVISFRYKHPEKNLTKARFNCIFSKVWSKCMSHDNIVNGFKATGLYPFDPDAIPIEAYAPSVLTERPTEQDPCIAQSPPASPLAGPSGISDRYVHQSSDTDETLFEDRNSGSPSLLHEYNSSHTVLDTGINRPIVDYSSTDSESAHPTLSNEPSTSGITVRRPVIYSSDSDISIDGNLIPLQRRQSQFALNIYSSSEDENMSPLSKQQRTPKKPVDTASYVNIDAIRQLYSSTSEDNEDDIPLDRLKTKATQKTPFQQLIPTPNFAVSKQKPRRKAINYKGTVVTKDLFTEKHNTGIQEKKQTGEIKRKQQKKKEKKCTKKSHSKSSNVEKIKGKKKKTHKRSVDDVDDDDDKWYCHACNTERFEDMRQCPLCKRWFHEICLGLTKEDDFECPMCM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491843; iTF_01491849; iTF_01491851; iTF_01491852; iTF_01491853; iTF_01491854; iTF_01491855; iTF_01491856;
- 90% Identity
- iTF_01491843; iTF_01491849; iTF_01491851; iTF_01491852; iTF_01491853; iTF_01491854; iTF_01491855; iTF_01491856;
- 80% Identity
- -