Temo013525.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352729.1:13685002-13685487[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-09 1.1e-06 28.7 0.0 3 37 17 51 15 57 0.94 2 2 2.6 6.9e+02 0.6 0.0 17 29 140 149 134 151 0.64
Sequence Information
- Coding Sequence
- ATGTCCCGTAAATACGAAAGAAAGACTCTGCGAGCATCTTGGAGTGCGGAGGATTTGGATGAGGCGATGAAGTTAGTTCGAAATAAAATATTGGGAGTTAATGAGGCATCGACAAATTACAATATTCCATCACGAACTTTGAGAAGGCACCTCATTACAGGTAGGTCAAAAGTTCCTCTTGGCCGTTATCCAGTATTTTCTCAAGAATACGAGAAGAAGTTGGTAGCCCATATAAAAAAAATAGAAAGCGTTGGATTTGCTCCAGAAAGAAAGGACGTGAAAGAAATGGCTTTTCAGTTAGCAACAAGTTTAAATATAAAAAATCCATTCTCAGAAGATTCTGAGGCTGCTGGGAATGTATGGTTCAAAGGATTTATGGCTCGTAATCCTGAACTTAGTCATAGAAAATCTGAAGGATTATCCTTATCACGAGCATATGGCGTAAATCGAGAGGATATAAAGGATTTTTTTTTATTTATTAGCTAA
- Protein Sequence
- MSRKYERKTLRASWSAEDLDEAMKLVRNKILGVNEASTNYNIPSRTLRRHLITGRSKVPLGRYPVFSQEYEKKLVAHIKKIESVGFAPERKDVKEMAFQLATSLNIKNPFSEDSEAAGNVWFKGFMARNPELSHRKSEGLSLSRAYGVNREDIKDFFLFIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -