Temo013402.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352729.1:11395816-11396292[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-11 1.6e-08 34.6 0.0 1 37 15 51 15 57 0.94 2 2 1 2.7e+02 1.8 0.0 22 30 142 150 128 151 0.77
Sequence Information
- Coding Sequence
- ATGTCTCAGAAGTATAATAGAAAAACACTGCGAGCATCATGGTCGCCAGAAGATTTAGAAGAAGCAATGGAAAAGGTAAAAAGCAAGACTATGGGTGTCAATGAAGCCTCCAGAATTTACCAGATTCCCTCCAGAACCCTCAGAAGACACCTTTTGACAGGTAAATCAAAAGTCCCTCTTGGTCGCAACCCAGTCTTTTCAGAAGAGTATGAAAAAAAATTAGAAGCCCATATAAAAAAATTAGAAAGAGTAGGGTTTGCACCAGACCGACGAGATGTAAAGGAAATAGCTTTTCAGTGGGCCACAAAACTTAAAATAAAACACCCATTTTCGGAAGAGTCTGGATTAGCGGGTAACGTCTGGTTTTCTGGATTTATGGCAAGAAATCCGGAACTAAGCCAAAGAAAGTCAGAAGGTTTATCCCTCGCACGAGCTTATGGAGTGAACAGAAAGGATGTTCAAGATTTTTTCGACTAG
- Protein Sequence
- MSQKYNRKTLRASWSPEDLEEAMEKVKSKTMGVNEASRIYQIPSRTLRRHLLTGKSKVPLGRNPVFSEEYEKKLEAHIKKLERVGFAPDRRDVKEIAFQWATKLKIKHPFSEESGLAGNVWFSGFMARNPELSQRKSEGLSLARAYGVNRKDVQDFFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -